------------------------------------------------------------------------------- -- Phase: Environment ------------------------------------------------------------------------------- NO_DEPENDS=1 UNAME_r=6.5 UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=unknown UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 LANG=C HOME=/root USER=root TERM=dumb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: showconfig ------------------------------------------------------------------------------- ===> The following configuration options are available for nlcglib-0.9.148_2: OPENMP=on: Parallel processing support via OpenMP ====> MPI (Message Passing Interface) support: you have to select exactly one of them MPICH=on: Parallel processing support via MPICH 3 OPENMPI=off: Parallel processing support via Open MPI ===> Use 'make config' to modify these settings SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ENV ------------------------------------------------------------------------------- PKG_CONFIG=pkgconf XDG_DATA_HOME=/construction/science/nlcglib XDG_CONFIG_HOME=/construction/science/nlcglib XDG_CACHE_HOME=/construction/science/nlcglib/.cache HOME=/construction/science/nlcglib TMPDIR="/tmp" PATH=/construction/science/nlcglib/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/science/nlcglib/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ARGS ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ENV ------------------------------------------------------------------------------- XDG_DATA_HOME=/construction/science/nlcglib XDG_CONFIG_HOME=/construction/science/nlcglib XDG_CACHE_HOME=/construction/science/nlcglib/.cache HOME=/construction/science/nlcglib TMPDIR="/tmp" PATH=/construction/science/nlcglib/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/science/nlcglib/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ARGS ------------------------------------------------------------------------------- DESTDIR=/construction/science/nlcglib/stage SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: PLIST_SUB ------------------------------------------------------------------------------- CMAKE_BUILD_TYPE="release" OSREL=6.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/nlcglib" EXAMPLESDIR="share/examples/nlcglib" DATADIR="share/nlcglib" WWWDIR="www/nlcglib" ETCDIR="etc/nlcglib" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: SUB_LIST ------------------------------------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/nlcglib DOCSDIR=/usr/local/share/doc/nlcglib EXAMPLESDIR=/usr/local/share/examples/nlcglib WWWDIR=/usr/local/www/nlcglib ETCDIR=/usr/local/etc/nlcglib SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: /etc/make.conf ------------------------------------------------------------------------------- DPORTS_BUILDER=yes DISABLE_LICENSES=yes DEFAULT_VERSIONS=ssl=openssl FORCE_PACKAGE=yes DEVELOPER=yes DFLY_STING_XFAIL=yes USE_PACKAGE_DEPENDS_ONLY=yes PORTSDIR=/xports PORT_DBDIR=/options PKG_DBDIR=/var/db/pkg PKG_CACHEDIR=/var/cache/pkg PKG_COMPRESSION_FORMAT=.tgz DEVELOPER=1 WITH_CCACHE_BUILD=yes CCACHE_DIR=/ccache UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=600503 OSVERSION=9999999 OSREL=6.5 _OSRELEASE=6.5-SYNTH DISTDIR=/distfiles WRKDIRPREFIX=/construction BATCH=yes PACKAGE_BUILDING=yes PKG_CREATE_VERBOSE=yes MAKE_JOBS_NUMBER=13 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/nlohmann-json-3.11.2.pkg Installing /packages/All/expat-2.5.0.pkg Installing /packages/All/libuv-1.46.0.pkg Installing /packages/All/indexinfo-0.3.1.pkg Installing /packages/All/gettext-runtime-0.21.1.pkg Installing /packages/All/openssl-1.1.1u,1.pkg Installing /packages/All/rhash-1.4.3.pkg Installing /packages/All/pkg-1.19.2.pkg Installing /packages/All/liblz4-1.9.4,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/zstd-1.5.5.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libarchive-3.6.2,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/ncurses-6.4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===== Message from ncurses-6.4: -- To get the terminfo database please install the terminfo-db package: pkg install terminfo-db Installing /packages/All/cmake-core-3.26.1_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/pkgconf-1.8.1,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/ccache-3.7.12_4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc create symlink for gcc (world) create symlink for g++ create symlink for g++ (world) ===== Message from ccache-3.7.12_4: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. Installing /packages/All/readline-8.2.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/bash-5.2.15.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/kokkos-3.7.01.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/gmp-6.2.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/mpfr-4.2.0_1,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/mpc-1.3.1_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/binutils-2.40_4,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/gcc12-12.2.0_6.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required create symlink for gcc12 create symlink for gcc12 (world) create symlink for g++12 create symlink for g++12 (world) create symlink for cpp12 create symlink for cpp12 (world) ===== Message from gcc12-12.2.0_6: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc12 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/openblas-0.3.20_1,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libpciaccess-0.17.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/level-zero-1.12.0.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libxml2-2.10.4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/hwloc2-2.8.0.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/json-c-0.16.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libsysinfo-0.0.3_2.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libgpg-error-1.47.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libgcrypt-1.10.2.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/munge-0.5.15.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libaec-1.0.6.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/hdf5-1.12.2_2,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libedit-3.1.20221030,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/lua54-5.4.6.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/slurm-wlm-20.02.7_3.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===> Creating groups. Creating group 'slurm' with gid '468'. ===> Creating users Creating user 'slurm' with uid '468'. ===== Message from slurm-wlm-20.02.7_3: -- ===> NOTICE: The slurm-wlm port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing Installing /packages/All/libepoll-shim-0.0.20230411.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/perl5-5.32.1_3.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/mpich-3.4.3_2.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===== Message from mpich-3.4.3_2: -- ===> NOTICE: The mpich port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:00:14 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> nlcglib-0.9.148_2 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> nlcglib-0.9.148_2 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by nlcglib-0.9.148_2 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> nlcglib-0.9.148_2 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by nlcglib-0.9.148_2 for building => SHA256 Checksum OK for simonpintarelli-nlcglib-v0.9-148-g9a1bca6_GH0.tar.gz. SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> nlcglib-0.9.148_2 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by nlcglib-0.9.148_2 for building ===> Extracting for nlcglib-0.9.148_2 => SHA256 Checksum OK for simonpintarelli-nlcglib-v0.9-148-g9a1bca6_GH0.tar.gz. Extracted Memory Use: 0.52M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for nlcglib-0.9.148_2 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> nlcglib-0.9.148_2 depends on package: nlohmann-json>0 - found ===> nlcglib-0.9.148_2 depends on file: /usr/local/bin/cmake - found ===> nlcglib-0.9.148_2 depends on package: pkgconf>=1.3.0_1 - found ===> nlcglib-0.9.148_2 depends on file: /usr/local/bin/ccache - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- ===> nlcglib-0.9.148_2 depends on shared library: libkokkoscore.so - found (/usr/local/lib/libkokkoscore.so) ===> nlcglib-0.9.148_2 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so) ===> nlcglib-0.9.148_2 depends on shared library: libmpich.so - found (/usr/local/lib/libmpich.so) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> nlcglib-0.9.148_2 depends on package: nlohmann-json>0 - found ===> nlcglib-0.9.148_2 depends on file: /usr/local/bin/cmake - found ===> nlcglib-0.9.148_2 depends on package: pkgconf>=1.3.0_1 - found ===> nlcglib-0.9.148_2 depends on file: /usr/local/bin/ccache - found ===> nlcglib-0.9.148_2 depends on shared library: libkokkoscore.so - found (/usr/local/lib/libkokkoscore.so) ===> nlcglib-0.9.148_2 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so) ===> nlcglib-0.9.148_2 depends on shared library: libmpich.so - found (/usr/local/lib/libmpich.so) ===> Configuring for nlcglib-0.9.148_2 ===> Performing out-of-source build /bin/mkdir -p /construction/science/nlcglib/.build -- The CXX compiler identification is GNU 8.3.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/libexec/ccache/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_CXX: /usr/local/lib/libmpicxx.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") found components: CXX -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Enabled Kokkos devices: OPENMP;SERIAL -- Found MPI: TRUE (found version "3.1") -- Found nlohmann_json: /usr/local/share/cmake/nlohmann_json/nlohmann_jsonConfig.cmake (found suitable version "3.11.2", minimum required is "3.2.0") CMake Warning (dev) at src/CMakeLists.txt:25 (install): Target nlcglib has PUBLIC_HEADER files but no PUBLIC_HEADER DESTINATION. This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done (1.5s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_COMPILER CMAKE_C_FLAGS CMAKE_C_FLAGS_DEBUG CMAKE_C_FLAGS_RELEASE CMAKE_MODULE_LINKER_FLAGS FETCHCONTENT_FULLY_DISCONNECTED THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /construction/science/nlcglib/.build SUCCEEDED 00:00:02 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for nlcglib-0.9.148_2 /usr/local/bin/cmake -S/construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6 -B/construction/science/nlcglib/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/science/nlcglib/.build/CMakeFiles /construction/science/nlcglib/.build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all --- src/CMakeFiles/nlcglib_internal.dir/all --- /usr/bin/make -f src/CMakeFiles/nlcglib_internal.dir/build.make src/CMakeFiles/nlcglib_internal.dir/depend --- src/CMakeFiles/nlcglib_internal.dir/depend --- cd /construction/science/nlcglib/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6 /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src /construction/science/nlcglib/.build /construction/science/nlcglib/.build/src /construction/science/nlcglib/.build/src/CMakeFiles/nlcglib_internal.dir/DependInfo.cmake /usr/bin/make -f src/CMakeFiles/nlcglib_internal.dir/build.make src/CMakeFiles/nlcglib_internal.dir/build --- src/CMakeFiles/nlcglib_internal.dir/la/cusolver.cpp.o --- --- src/CMakeFiles/nlcglib_internal.dir/gpu/acc.cpp.o --- --- src/CMakeFiles/nlcglib_internal.dir/la/cusolver.cpp.o --- [ 16%] Building CXX object src/CMakeFiles/nlcglib_internal.dir/la/cusolver.cpp.o cd /construction/science/nlcglib/.build/src && /usr/local/libexec/ccache/c++ -DKOKKOS_DEPENDENCE -I/construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src -I/construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/include -isystem /usr/local/include -pipe -O2 -fno-strict-aliasing -Wall -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fopenmp -MD -MT src/CMakeFiles/nlcglib_internal.dir/la/cusolver.cpp.o -MF CMakeFiles/nlcglib_internal.dir/la/cusolver.cpp.o.d -o CMakeFiles/nlcglib_internal.dir/la/cusolver.cpp.o -c /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/la/cusolver.cpp --- src/CMakeFiles/nlcglib_internal.dir/gpu/acc.cpp.o --- [ 33%] Building CXX object src/CMakeFiles/nlcglib_internal.dir/gpu/acc.cpp.o cd /construction/science/nlcglib/.build/src && /usr/local/libexec/ccache/c++ -DKOKKOS_DEPENDENCE -I/construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src -I/construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/include -isystem /usr/local/include -pipe -O2 -fno-strict-aliasing -Wall -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fopenmp -MD -MT src/CMakeFiles/nlcglib_internal.dir/gpu/acc.cpp.o -MF CMakeFiles/nlcglib_internal.dir/gpu/acc.cpp.o.d -o CMakeFiles/nlcglib_internal.dir/gpu/acc.cpp.o -c /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/gpu/acc.cpp --- src/libnlcglib_internal.a --- [ 50%] Linking CXX static library libnlcglib_internal.a cd /construction/science/nlcglib/.build/src && /usr/local/bin/cmake -P CMakeFiles/nlcglib_internal.dir/cmake_clean_target.cmake cd /construction/science/nlcglib/.build/src && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/nlcglib_internal.dir/link.txt --verbose=1 /usr/bin/ar qc libnlcglib_internal.a CMakeFiles/nlcglib_internal.dir/la/cusolver.cpp.o CMakeFiles/nlcglib_internal.dir/gpu/acc.cpp.o /usr/bin/ranlib libnlcglib_internal.a [ 50%] Built target nlcglib_internal --- src/CMakeFiles/nlcglib.dir/all --- /usr/bin/make -f src/CMakeFiles/nlcglib.dir/build.make src/CMakeFiles/nlcglib.dir/depend --- src/CMakeFiles/nlcglib.dir/depend --- cd /construction/science/nlcglib/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6 /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src /construction/science/nlcglib/.build /construction/science/nlcglib/.build/src /construction/science/nlcglib/.build/src/CMakeFiles/nlcglib.dir/DependInfo.cmake /usr/bin/make -f src/CMakeFiles/nlcglib.dir/build.make src/CMakeFiles/nlcglib.dir/build --- src/CMakeFiles/nlcglib.dir/nlcglib.cpp.o --- [ 66%] Building CXX object src/CMakeFiles/nlcglib.dir/nlcglib.cpp.o cd /construction/science/nlcglib/.build/src && /usr/local/libexec/ccache/c++ -DKOKKOS_DEPENDENCE -D__USE_OPENMP -Dnlcglib_EXPORTS -I/construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/include -I/construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src -isystem /usr/local/include -pipe -O2 -fno-strict-aliasing -Wall -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fopenmp -MD -MT src/CMakeFiles/nlcglib.dir/nlcglib.cpp.o -MF CMakeFiles/nlcglib.dir/nlcglib.cpp.o.d -o CMakeFiles/nlcglib.dir/nlcglib.cpp.o -c /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp In file included from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/traits.hpp:3, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/la/mvector.hpp:8, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:10, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/free_energy.hpp:6, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp:10: /usr/local/include/Kokkos_View.hpp:51:79: note: #pragma message: "Including non-public Kokkos header files is not allowed." KOKKOS_IMPL_WARNING("Including non-public Kokkos header files is not allowed.") ^ In file included from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/la/dvector.hpp:4, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/la/mvector.hpp:15, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:10, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/free_energy.hpp:6, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp:10: /usr/local/include/Kokkos_View.hpp:51:79: note: #pragma message: "Including non-public Kokkos header files is not allowed." KOKKOS_IMPL_WARNING("Including non-public Kokkos header files is not allowed.") ^ In file included from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/la/lapack_cpu.hpp:11, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/la/lapack.hpp:6, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/geodesic.hpp:6, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp:11: /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/la/cblas.hpp: In static member function 'static void nlcglib::cblas::geam >::call(CBLAS_ORDER, CBLAS_TRANSPOSE, CBLAS_TRANSPOSE, int, int, Kokkos::complex, const Kokkos::complex*, int, Kokkos::complex, const Kokkos::complex*, int, Kokkos::complex*, int)': /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/la/cblas.hpp:376:28: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'const int' [-Wsign-compare] for (auto j = 0ul; j < N; ++j) { ~~^~~ /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/la/cblas.hpp:377:30: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'const int' [-Wsign-compare] for (auto i = 0ul; i < M; ++i) { ~~^~~ /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp: In function 'void nlcglib::initialize()': /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp:38:25: warning: 'Kokkos::InitArguments::InitArguments(int, int, int, bool, bool)' is deprecated: Use InitializationSettings instead! [-Wdeprecated-declarations] Kokkos::InitArguments args; ^~~~ In file included from /usr/local/include/Kokkos_OpenMP.hpp:76, from /usr/local/include/decl/Kokkos_Declare_OPENMP.hpp:49, from /usr/local/include/KokkosCore_Config_DeclareBackend.hpp:47, from /usr/local/include/Kokkos_Core.hpp:57, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp:2: /usr/local/include/impl/Kokkos_InitializationSettings.hpp:69:3: note: declared here InitArguments(int nt = -1, int nn = -1, int dv = -1, bool dw = false, ^~~~~~~~~~~~~ In file included from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/free_energy.hpp:6, from /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp:10: /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp: In instantiation of 'auto nlcglib::occupation_from_mvector_newton(double, const nlcglib::mvector&, double, double, int, const scalar_vec_t&, double) [with SMEARING = nlcglib::fermi_dirac; X = Kokkos::View; scalar_vec_t = nlcglib::mvector]': /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:540:54: required from 'auto nlcglib::occupation_from_mvector1(double, const nlcglib::mvector&, double, int, const scalar_vec_t&, double) [with smearing_t = nlcglib::fermi_dirac; X = Kokkos::View; scalar_vec_t = nlcglib::mvector]' /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:601:57: required from 'auto nlcglib::Smearing::fn(const nlcglib::mvector&) [with X = Kokkos::View]' /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp:255:30: required from here /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:476:5: warning: catching polymorphic type 'struct nlcglib::failed_to_converge' by value [-Wcatch-value=] } catch (failed_to_converge) { ^~~~~ /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp: In instantiation of 'auto nlcglib::occupation_from_mvector_newton(double, const nlcglib::mvector&, double, double, int, const scalar_vec_t&, double) [with SMEARING = nlcglib::gaussian_spline; X = Kokkos::View; scalar_vec_t = nlcglib::mvector]': /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:540:54: required from 'auto nlcglib::occupation_from_mvector1(double, const nlcglib::mvector&, double, int, const scalar_vec_t&, double) [with smearing_t = nlcglib::gaussian_spline; X = Kokkos::View; scalar_vec_t = nlcglib::mvector]' /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:606:61: required from 'auto nlcglib::Smearing::fn(const nlcglib::mvector&) [with X = Kokkos::View]' /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp:255:30: required from here /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:476:5: warning: catching polymorphic type 'struct nlcglib::failed_to_converge' by value [-Wcatch-value=] /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp: In instantiation of 'auto nlcglib::occupation_from_mvector_newton(double, const nlcglib::mvector&, double, double, int, const scalar_vec_t&, double) [with SMEARING = nlcglib::gauss_smearing; X = Kokkos::View; scalar_vec_t = nlcglib::mvector]': /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:540:54: required from 'auto nlcglib::occupation_from_mvector1(double, const nlcglib::mvector&, double, int, const scalar_vec_t&, double) [with smearing_t = nlcglib::gauss_smearing; X = Kokkos::View; scalar_vec_t = nlcglib::mvector]' /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:611:60: required from 'auto nlcglib::Smearing::fn(const nlcglib::mvector&) [with X = Kokkos::View]' /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp:255:30: required from here /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:476:5: warning: catching polymorphic type 'struct nlcglib::failed_to_converge' by value [-Wcatch-value=] /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp: In instantiation of 'auto nlcglib::occupation_from_mvector_newton(double, const nlcglib::mvector&, double, double, int, const scalar_vec_t&, double) [with SMEARING = nlcglib::methfessel_paxton_smearing; X = Kokkos::View; scalar_vec_t = nlcglib::mvector]': /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:540:54: required from 'auto nlcglib::occupation_from_mvector1(double, const nlcglib::mvector&, double, int, const scalar_vec_t&, double) [with smearing_t = nlcglib::methfessel_paxton_smearing; X = Kokkos::View; scalar_vec_t = nlcglib::mvector]' /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:616:72: required from 'auto nlcglib::Smearing::fn(const nlcglib::mvector&) [with X = Kokkos::View]' /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp:255:30: required from here /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:476:5: warning: catching polymorphic type 'struct nlcglib::failed_to_converge' by value [-Wcatch-value=] /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp: In instantiation of 'auto nlcglib::occupation_from_mvector_newton(double, const nlcglib::mvector&, double, double, int, const scalar_vec_t&, double) [with SMEARING = nlcglib::cold_smearing; X = Kokkos::View; scalar_vec_t = nlcglib::mvector]': /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:540:54: required from 'auto nlcglib::occupation_from_mvector1(double, const nlcglib::mvector&, double, int, const scalar_vec_t&, double) [with smearing_t = nlcglib::cold_smearing; X = Kokkos::View; scalar_vec_t = nlcglib::mvector]' /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:621:59: required from 'auto nlcglib::Smearing::fn(const nlcglib::mvector&) [with X = Kokkos::View]' /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/nlcglib.cpp:255:30: required from here /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src/smearing.hpp:476:5: warning: catching polymorphic type 'struct nlcglib::failed_to_converge' by value [-Wcatch-value=] --- src/libnlcglib.so --- [ 83%] Linking CXX shared library libnlcglib.so cd /construction/science/nlcglib/.build/src && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/nlcglib.dir/link.txt --verbose=1 /usr/local/libexec/ccache/c++ -fPIC -pipe -O2 -fno-strict-aliasing -Wall -pipe -O2 -fno-strict-aliasing -DNDEBUG -DKOKKOS_DEPENDENCE -fopenmp -Wl,-rpath=/usr/local/lib/gcc12 -Wl,-rpath -Wl,/usr/local/lib -L/usr/local/lib/gcc12 -shared -Wl,-soname,libnlcglib.so -o libnlcglib.so CMakeFiles/nlcglib.dir/nlcglib.cpp.o -Wl,-z,origin,-rpath,/usr/local/lib libnlcglib_internal.a /usr/local/lib/libkokkoscontainers.so.3.7.01 /usr/local/lib/libkokkoscore.so.3.7.01 /usr/local/lib/libmpicxx.so /usr/local/lib/libmpi.so /usr/lib/gcc80/libgomp.so /usr/lib/libpthread.so /usr/local/lib/libopenblas.so [100%] Built target nlcglib /usr/local/bin/cmake -E cmake_progress_start /construction/science/nlcglib/.build/CMakeFiles 0 SUCCEEDED 00:00:54 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for nlcglib-0.9.148_2 ===> Generating temporary packing list /usr/local/bin/cmake -S/construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6 -B/construction/science/nlcglib/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/science/nlcglib/.build/CMakeFiles /construction/science/nlcglib/.build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f src/CMakeFiles/nlcglib_internal.dir/build.make src/CMakeFiles/nlcglib_internal.dir/depend cd /construction/science/nlcglib/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6 /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src /construction/science/nlcglib/.build /construction/science/nlcglib/.build/src /construction/science/nlcglib/.build/src/CMakeFiles/nlcglib_internal.dir/DependInfo.cmake /usr/bin/make -f src/CMakeFiles/nlcglib_internal.dir/build.make src/CMakeFiles/nlcglib_internal.dir/build [ 50%] Built target nlcglib_internal /usr/bin/make -f src/CMakeFiles/nlcglib.dir/build.make src/CMakeFiles/nlcglib.dir/depend cd /construction/science/nlcglib/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6 /construction/science/nlcglib/nlcglib-0.9-148-g9a1bca6/src /construction/science/nlcglib/.build /construction/science/nlcglib/.build/src /construction/science/nlcglib/.build/src/CMakeFiles/nlcglib.dir/DependInfo.cmake /usr/bin/make -f src/CMakeFiles/nlcglib.dir/build.make src/CMakeFiles/nlcglib.dir/build [100%] Built target nlcglib /usr/local/bin/cmake -E cmake_progress_start /construction/science/nlcglib/.build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall /usr/bin/make -f src/CMakeFiles/nlcglib.dir/build.make src/CMakeFiles/nlcglib.dir/preinstall Linking CXX shared library CMakeFiles/CMakeRelink.dir/libnlcglib.so cd /construction/science/nlcglib/.build/src && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/nlcglib.dir/relink.txt --verbose=1 /usr/local/libexec/ccache/c++ -fPIC -pipe -O2 -fno-strict-aliasing -Wall -pipe -O2 -fno-strict-aliasing -DNDEBUG -DKOKKOS_DEPENDENCE -fopenmp -Wl,-rpath=/usr/local/lib/gcc12 -Wl,-rpath -Wl,/usr/local/lib -L/usr/local/lib/gcc12 -shared -Wl,-soname,libnlcglib.so -o CMakeFiles/CMakeRelink.dir/libnlcglib.so CMakeFiles/nlcglib.dir/nlcglib.cpp.o -Wl,-z,origin,-rpath,/usr/local/lib libnlcglib_internal.a /usr/local/lib/libkokkoscontainers.so.3.7.01 /usr/local/lib/libkokkoscore.so.3.7.01 /usr/local/lib/libmpicxx.so /usr/local/lib/libmpi.so /usr/lib/gcc80/libgomp.so /usr/lib/libpthread.so /usr/local/lib/libopenblas.so Installing the project stripped... /usr/local/bin/cmake -DCMAKE_INSTALL_DO_STRIP=1 -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /construction/science/nlcglib/stage/usr/local/lib/libnlcglib.so -- Installing: /construction/science/nlcglib/stage/usr/local/lib/cmake/nlcglib/nlcglib-targets.cmake -- Installing: /construction/science/nlcglib/stage/usr/local/lib/cmake/nlcglib/nlcglib-targets-release.cmake -- Installing: /construction/science/nlcglib/stage/usr/local/lib/cmake/nlcglib/nlcglib-config.cmake -- Installing: /construction/science/nlcglib/stage/usr/local/lib/cmake/nlcglib/nlcglibConfigVersion.cmake -- Installing: /construction/science/nlcglib/stage/usr/local/include/nlcglib/nlcglib.hpp -- Installing: /construction/science/nlcglib/stage/usr/local/include/nlcglib/interface.hpp ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Error: /usr/local/lib/libnlcglib.so is linked to /usr/local/lib/libhwloc.so.15 from devel/hwloc2 but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libhwloc.so:devel/hwloc2 Error: /usr/local/lib/libnlcglib.so is linked to /usr/local/lib/libepoll-shim.so.0 from devel/libepoll-shim but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libepoll-shim.so:devel/libepoll-shim Error: /usr/local/lib/libnlcglib.so is linked to /usr/local/lib/libjson-c.so.5 from devel/json-c but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libjson-c.so:devel/json-c Error: /usr/local/lib/libnlcglib.so is linked to /usr/local/lib/gcc12/libgfortran.so.5 from lang/gcc12 but it is not declared as a dependency Error: /usr/local/lib/libnlcglib.so is linked to /usr/local/lib/libpciaccess.so.0 from devel/libpciaccess but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libpciaccess.so:devel/libpciaccess Error: /usr/local/lib/libnlcglib.so is linked to /usr/local/lib/libze_loader.so.1 from devel/level-zero but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libze_loader.so:devel/level-zero Error: /usr/local/lib/libnlcglib.so is linked to /usr/local/lib/libxml2.so.2 from textproc/libxml2 but it is not declared as a dependency Warning: you need USE_GNOME+=libxml2 Error: /usr/local/lib/libnlcglib.so is linked to /usr/local/lib/gcc12/libquadmath.so.0 from lang/gcc12 but it is not declared as a dependency Error: /usr/local/lib/libnlcglib.so is linked to /usr/local/lib/gcc12/libgcc_s.so.1 from lang/gcc12 but it is not declared as a dependency Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: check-plist ------------------------------------------------------------------------------- ====> Checking for pkg-plist issues (check-plist) ===> Parsing plist ===> Checking for items in STAGEDIR missing from pkg-plist ===> Checking for items in pkg-plist which are not in STAGEDIR ===> No pkg-plist issues found (check-plist) SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for nlcglib-0.9.148_2 file sizes/checksums [7]: 0% file sizes/checksums [7]: 100% Service unavailablepacking files [7]: 0% packing files [7]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:00 TOTAL TIME 00:01:14