------------------------------------------------------------------------------- -- Phase: Environment ------------------------------------------------------------------------------- NO_DEPENDS=1 UNAME_r=6.5 UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=unknown UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 LANG=C HOME=/root USER=root TERM=dumb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: showconfig ------------------------------------------------------------------------------- ===> The following configuration options are available for gemmi-0.6.2: FORTRAN=off: Fortran language support ===> Use 'make config' to modify these settings SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ENV ------------------------------------------------------------------------------- XDG_DATA_HOME=/construction/science/gemmi XDG_CONFIG_HOME=/construction/science/gemmi XDG_CACHE_HOME=/construction/science/gemmi/.cache HOME=/construction/science/gemmi TMPDIR="/tmp" PATH=/construction/science/gemmi/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/science/gemmi/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ARGS ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ENV ------------------------------------------------------------------------------- XDG_DATA_HOME=/construction/science/gemmi XDG_CONFIG_HOME=/construction/science/gemmi XDG_CACHE_HOME=/construction/science/gemmi/.cache HOME=/construction/science/gemmi TMPDIR="/tmp" PATH=/construction/science/gemmi/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/science/gemmi/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="gcc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="g++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ARGS ------------------------------------------------------------------------------- DESTDIR=/construction/science/gemmi/stage SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: PLIST_SUB ------------------------------------------------------------------------------- CMAKE_BUILD_TYPE="release" OSREL=6.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/gemmi" EXAMPLESDIR="share/examples/gemmi" DATADIR="share/gemmi" WWWDIR="www/gemmi" ETCDIR="etc/gemmi" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: SUB_LIST ------------------------------------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/gemmi DOCSDIR=/usr/local/share/doc/gemmi EXAMPLESDIR=/usr/local/share/examples/gemmi WWWDIR=/usr/local/www/gemmi ETCDIR=/usr/local/etc/gemmi SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: /etc/make.conf ------------------------------------------------------------------------------- DPORTS_BUILDER=yes DISABLE_LICENSES=yes DEFAULT_VERSIONS=ssl=openssl FORCE_PACKAGE=yes DEVELOPER=yes DFLY_STING_XFAIL=yes USE_PACKAGE_DEPENDS_ONLY=yes PORTSDIR=/xports PORT_DBDIR=/options PKG_DBDIR=/var/db/pkg PKG_CACHEDIR=/var/cache/pkg PKG_COMPRESSION_FORMAT=.tgz DEVELOPER=1 WITH_CCACHE_BUILD=yes CCACHE_DIR=/ccache UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=600503 OSVERSION=9999999 OSREL=6.5 _OSRELEASE=6.5-SYNTH DISTDIR=/distfiles WRKDIRPREFIX=/construction BATCH=yes PACKAGE_BUILDING=yes PKG_CREATE_VERBOSE=yes MAKE_JOBS_NUMBER=13 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/expat-2.5.0.pkg Installing /packages/All/libuv-1.46.0.pkg Installing /packages/All/indexinfo-0.3.1.pkg Installing /packages/All/gettext-runtime-0.21.1.pkg Installing /packages/All/openssl-1.1.1u,1.pkg Installing /packages/All/rhash-1.4.3.pkg Installing /packages/All/pkg-1.19.2.pkg Installing /packages/All/liblz4-1.9.4,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/zstd-1.5.5.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libarchive-3.6.2,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/ncurses-6.4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===== Message from ncurses-6.4: -- To get the terminfo database please install the terminfo-db package: pkg install terminfo-db Installing /packages/All/cmake-core-3.26.1_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/ccache-3.7.12_4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc create symlink for gcc (world) create symlink for g++ create symlink for g++ (world) ===== Message from ccache-3.7.12_4: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. SUCCEEDED 00:00:07 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> gemmi-0.6.2 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> gemmi-0.6.2 depends on file: /usr/local/sbin/pkg - found => project-gemmi-gemmi-v0.6.2_GH0.tar.gz doesn't seem to exist in /distfiles/. => Attempting to fetch https://codeload.github.com/project-gemmi/gemmi/tar.gz/v0.6.2?dummy=/project-gemmi-gemmi-v0.6.2_GH0.tar.gz fetch: https://codeload.github.com/project-gemmi/gemmi/tar.gz/v0.6.2?dummy=/project-gemmi-gemmi-v0.6.2_GH0.tar.gz: size unknown fetch: https://codeload.github.com/project-gemmi/gemmi/tar.gz/v0.6.2?dummy=/project-gemmi-gemmi-v0.6.2_GH0.tar.gz: size of remote file is not known project-gemmi-gemmi-v0.6.2_GH0.tar.gz 0 B 0 Bps project-gemmi-gemmi-v0.6.2_GH0.tar.gz 512 kB 950 kBps project-gemmi-gemmi-v0.6.2_GH0.tar.gz 1692 kB 1571 kBps 01s ===> Fetching all distfiles required by gemmi-0.6.2 for building SUCCEEDED 00:00:02 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> gemmi-0.6.2 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by gemmi-0.6.2 for building => SHA256 Checksum OK for project-gemmi-gemmi-v0.6.2_GH0.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> gemmi-0.6.2 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by gemmi-0.6.2 for building ===> Extracting for gemmi-0.6.2 => SHA256 Checksum OK for project-gemmi-gemmi-v0.6.2_GH0.tar.gz. Extracted Memory Use: 6.47M SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for gemmi-0.6.2 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> gemmi-0.6.2 depends on file: /usr/local/bin/cmake - found ===> gemmi-0.6.2 depends on file: /usr/local/bin/ccache - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> gemmi-0.6.2 depends on file: /usr/local/bin/cmake - found ===> gemmi-0.6.2 depends on file: /usr/local/bin/ccache - found ===> Configuring for gemmi-0.6.2 ===> Performing out-of-source build /bin/mkdir -p /construction/science/gemmi/.build -- The C compiler identification is GNU 8.3.0 -- The CXX compiler identification is GNU 8.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/libexec/ccache/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/libexec/ccache/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Gemmi version 0.6.2 -- Interprocedural optimization not supported: -- Compiling with C++ standard: 20 -- Found ZLIB: /usr/lib/libz.so (found version "1.2.11") -- Benchmarks not configured. -- Skipping Python module. Add -D USE_PYTHON=1 to build it. -- Configuring done (2.6s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_MODULE_LINKER_FLAGS FETCHCONTENT_FULLY_DISCONNECTED THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /construction/science/gemmi/.build SUCCEEDED 00:00:03 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for gemmi-0.6.2 /usr/local/bin/cmake -S/construction/science/gemmi/gemmi-0.6.2 -B/construction/science/gemmi/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/science/gemmi/.build/CMakeFiles /construction/science/gemmi/.build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all --- CMakeFiles/options.dir/all --- --- CMakeFiles/gemmi_cpp.dir/all --- --- CMakeFiles/options.dir/all --- /usr/bin/make -f CMakeFiles/options.dir/build.make CMakeFiles/options.dir/depend --- CMakeFiles/gemmi_cpp.dir/all --- /usr/bin/make -f CMakeFiles/gemmi_cpp.dir/build.make CMakeFiles/gemmi_cpp.dir/depend --- CMakeFiles/options.dir/all --- --- CMakeFiles/options.dir/depend --- cd /construction/science/gemmi/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/gemmi/gemmi-0.6.2 /construction/science/gemmi/gemmi-0.6.2 /construction/science/gemmi/.build /construction/science/gemmi/.build /construction/science/gemmi/.build/CMakeFiles/options.dir/DependInfo.cmake --- CMakeFiles/gemmi_cpp.dir/all --- --- CMakeFiles/gemmi_cpp.dir/depend --- cd /construction/science/gemmi/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/gemmi/gemmi-0.6.2 /construction/science/gemmi/gemmi-0.6.2 /construction/science/gemmi/.build /construction/science/gemmi/.build /construction/science/gemmi/.build/CMakeFiles/gemmi_cpp.dir/DependInfo.cmake --- CMakeFiles/options.dir/all --- /usr/bin/make -f CMakeFiles/options.dir/build.make CMakeFiles/options.dir/build --- CMakeFiles/gemmi_cpp.dir/all --- /usr/bin/make -f CMakeFiles/gemmi_cpp.dir/build.make CMakeFiles/gemmi_cpp.dir/build --- CMakeFiles/options.dir/all --- --- CMakeFiles/options.dir/prog/options.cpp.o --- [ 0%] Building CXX object CMakeFiles/options.dir/prog/options.cpp.o /usr/local/libexec/ccache/g++ -I/construction/science/gemmi/gemmi-0.6.2/include -I/construction/science/gemmi/gemmi-0.6.2/third_party -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=c++2a -fvisibility-inlines-hidden -MD -MT CMakeFiles/options.dir/prog/options.cpp.o -MF CMakeFiles/options.dir/prog/options.cpp.o.d -o CMakeFiles/options.dir/prog/options.cpp.o -c /construction/science/gemmi/gemmi-0.6.2/prog/options.cpp --- CMakeFiles/gemmi_cpp.dir/all --- --- CMakeFiles/gemmi_cpp.dir/src/assembly.cpp.o --- --- CMakeFiles/gemmi_cpp.dir/src/calculate.cpp.o --- --- CMakeFiles/gemmi_cpp.dir/src/crd.cpp.o --- --- CMakeFiles/gemmi_cpp.dir/src/eig3.cpp.o --- --- CMakeFiles/gemmi_cpp.dir/src/mmcif.cpp.o --- --- CMakeFiles/gemmi_cpp.dir/src/mmread_gz.cpp.o --- --- CMakeFiles/gemmi_cpp.dir/src/mtz.cpp.o --- --- CMakeFiles/gemmi_cpp.dir/src/mtz2cif.cpp.o --- --- CMakeFiles/gemmi_cpp.dir/src/polyheur.cpp.o --- --- CMakeFiles/gemmi_cpp.dir/src/read_cif.cpp.o --- --- CMakeFiles/gemmi_cpp.dir/src/resinfo.cpp.o --- --- CMakeFiles/gemmi_cpp.dir/src/riding_h.cpp.o --- --- CMakeFiles/gemmi_cpp.dir/src/assembly.cpp.o --- [ 2%] Building CXX object CMakeFiles/gemmi_cpp.dir/src/assembly.cpp.o /usr/local/libexec/ccache/g++ -DGEMMI_BUILD -DGEMMI_SHARED -Dgemmi_cpp_EXPORTS -I/construction/science/gemmi/gemmi-0.6.2/include -I/construction/science/gemmi/gemmi-0.6.2/third_party -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=c++2a -fPIC -fvisibility-inlines-hidden -MD -MT CMakeFiles/gemmi_cpp.dir/src/assembly.cpp.o -MF CMakeFiles/gemmi_cpp.dir/src/assembly.cpp.o.d -o CMakeFiles/gemmi_cpp.dir/src/assembly.cpp.o -c /construction/science/gemmi/gemmi-0.6.2/src/assembly.cpp --- CMakeFiles/gemmi_cpp.dir/src/calculate.cpp.o --- [ 5%] Building CXX object CMakeFiles/gemmi_cpp.dir/src/calculate.cpp.o /usr/local/libexec/ccache/g++ -DGEMMI_BUILD -DGEMMI_SHARED -Dgemmi_cpp_EXPORTS -I/construction/science/gemmi/gemmi-0.6.2/include -I/construction/science/gemmi/gemmi-0.6.2/third_party -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=c++2a -fPIC -fvisibility-inlines-hidden -MD -MT CMakeFiles/gemmi_cpp.dir/src/calculate.cpp.o -MF CMakeFiles/gemmi_cpp.dir/src/calculate.cpp.o.d -o CMakeFiles/gemmi_cpp.dir/src/calculate.cpp.o -c /construction/science/gemmi/gemmi-0.6.2/src/calculate.cpp --- CMakeFiles/gemmi_cpp.dir/src/crd.cpp.o --- [ 5%] Building CXX object CMakeFiles/gemmi_cpp.dir/src/crd.cpp.o /usr/local/libexec/ccache/g++ -DGEMMI_BUILD -DGEMMI_SHARED -Dgemmi_cpp_EXPORTS -I/construction/science/gemmi/gemmi-0.6.2/include -I/construction/science/gemmi/gemmi-0.6.2/third_party -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=c++2a -fPIC -fvisibility-inlines-hidden -MD -MT CMakeFiles/gemmi_cpp.dir/src/crd.cpp.o -MF CMakeFiles/gemmi_cpp.dir/src/crd.cpp.o.d -o CMakeFiles/gemmi_cpp.dir/src/crd.cpp.o -c /construction/science/gemmi/gemmi-0.6.2/src/crd.cpp --- CMakeFiles/gemmi_cpp.dir/src/mmcif.cpp.o --- [ 8%] Building CXX object CMakeFiles/gemmi_cpp.dir/src/mmcif.cpp.o /usr/local/libexec/ccache/g++ -DGEMMI_BUILD -DGEMMI_SHARED -Dgemmi_cpp_EXPORTS -I/construction/science/gemmi/gemmi-0.6.2/include -I/construction/science/gemmi/gemmi-0.6.2/third_party -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=c++2a -fPIC -fvisibility-inlines-hidden -MD -MT CMakeFiles/gemmi_cpp.dir/src/mmcif.cpp.o -MF CMakeFiles/gemmi_cpp.dir/src/mmcif.cpp.o.d -o CMakeFiles/gemmi_cpp.dir/src/mmcif.cpp.o -c /construction/science/gemmi/gemmi-0.6.2/src/mmcif.cpp --- CMakeFiles/gemmi_cpp.dir/src/polyheur.cpp.o --- [ 10%] Building CXX object CMakeFiles/gemmi_cpp.dir/src/polyheur.cpp.o --- CMakeFiles/gemmi_cpp.dir/src/mtz2cif.cpp.o --- [ 13%] Building CXX object CMakeFiles/gemmi_cpp.dir/src/mtz2cif.cpp.o --- CMakeFiles/gemmi_cpp.dir/src/polyheur.cpp.o --- /usr/local/libexec/ccache/g++ -DGEMMI_BUILD -DGEMMI_SHARED -Dgemmi_cpp_EXPORTS -I/construction/science/gemmi/gemmi-0.6.2/include -I/construction/science/gemmi/gemmi-0.6.2/third_party -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=c++2a -fPIC -fvisibility-inlines-hidden -MD -MT CMakeFiles/gemmi_cpp.dir/src/polyheur.cpp.o -MF CMakeFiles/gemmi_cpp.dir/src/polyheur.cpp.o.d -o CMakeFiles/gemmi_cpp.dir/src/polyheur.cpp.o -c /construction/science/gemmi/gemmi-0.6.2/src/polyheur.cpp --- CMakeFiles/gemmi_cpp.dir/src/mtz2cif.cpp.o --- /usr/local/libexec/ccache/g++ -DGEMMI_BUILD -DGEMMI_SHARED -Dgemmi_cpp_EXPORTS -I/construction/science/gemmi/gemmi-0.6.2/include -I/construction/science/gemmi/gemmi-0.6.2/third_party -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=c++2a -fPIC -fvisibility-inlines-hidden -MD -MT CMakeFiles/gemmi_cpp.dir/src/mtz2cif.cpp.o -MF CMakeFiles/gemmi_cpp.dir/src/mtz2cif.cpp.o.d -o CMakeFiles/gemmi_cpp.dir/src/mtz2cif.cpp.o -c /construction/science/gemmi/gemmi-0.6.2/src/mtz2cif.cpp --- CMakeFiles/gemmi_cpp.dir/src/mtz.cpp.o --- [ 13%] Building CXX object CMakeFiles/gemmi_cpp.dir/src/mtz.cpp.o /usr/local/libexec/ccache/g++ -DGEMMI_BUILD -DGEMMI_SHARED -Dgemmi_cpp_EXPORTS -I/construction/science/gemmi/gemmi-0.6.2/include -I/construction/science/gemmi/gemmi-0.6.2/third_party -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=c++2a -fPIC -fvisibility-inlines-hidden -MD -MT CMakeFiles/gemmi_cpp.dir/src/mtz.cpp.o -MF CMakeFiles/gemmi_cpp.dir/src/mtz.cpp.o.d -o CMakeFiles/gemmi_cpp.dir/src/mtz.cpp.o -c 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/construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/normal.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/nothing.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/parse.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/parse_error.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/position.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/read_input.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/rewind_mode.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/rules.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/string_input.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/tracking_mode.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/utf16.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/utf32.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/utf8.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tao/pegtl/version.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/third_party/tinydir.h -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/to_chemcomp.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/to_cif.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/to_json.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/to_mmcif.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/to_pdb.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/topo.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/twin.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/unitcell.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/utf.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/util.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/version.hpp -- Installing: /construction/science/gemmi/stage/usr/local/include/gemmi/xds_ascii.hpp -- Installing: /construction/science/gemmi/stage/usr/local/bin/gemmi -- Installing: /construction/science/gemmi/stage/usr/local/lib/libgemmi_cpp.so -- Installing: /construction/science/gemmi/stage/usr/local/lib/cmake/gemmi/gemmi-targets.cmake -- Installing: /construction/science/gemmi/stage/usr/local/lib/cmake/gemmi/gemmi-targets-release.cmake -- Installing: /construction/science/gemmi/stage/usr/local/lib/cmake/gemmi/gemmi-config.cmake -- Installing: /construction/science/gemmi/stage/usr/local/lib/cmake/gemmi/gemmi-config-version.cmake ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:02 ------------------------------------------------------------------------------- -- Phase: check-plist ------------------------------------------------------------------------------- ====> Checking for pkg-plist issues (check-plist) ===> Parsing plist ===> Checking for items in STAGEDIR missing from pkg-plist ===> Checking for items in pkg-plist which are not in STAGEDIR ===> No pkg-plist issues found (check-plist) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for gemmi-0.6.2 file sizes/checksums [237]: 0% file sizes/checksums [237]: 42% file sizes/checksums [237]: 84% file sizes/checksums [237]: 100% Service unavailablepacking files [237]: 0% packing files [237]: 42% packing files [237]: 84% packing files [237]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:02 TOTAL TIME 00:04:00