------------------------------------------------------------------------------- -- Phase: Environment ------------------------------------------------------------------------------- NO_DEPENDS=1 UNAME_r=6.5 UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=unknown UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 LANG=C HOME=/root USER=root TERM=dumb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: showconfig ------------------------------------------------------------------------------- ===> The following configuration options are available for chemtool-devel-1.7.20050716_12: EXAMPLES=on: Build and/or install examples ===> Use 'make config' to modify these settings SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ENV ------------------------------------------------------------------------------- MAKE=gmake PKG_CONFIG=pkgconf XDG_DATA_HOME=/construction/science/chemtool-devel XDG_CONFIG_HOME=/construction/science/chemtool-devel XDG_CACHE_HOME=/construction/science/chemtool-devel/.cache HOME=/construction/science/chemtool-devel TMPDIR="/tmp" PATH=/construction/science/chemtool-devel/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/science/chemtool-devel/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 LANG=en_US.UTF-8 LC_ALL=en_US.UTF-8 CONFIG_SITE=/xports/Templates/config.site lt_cv_sys_max_cmd_len=262144 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ARGS ------------------------------------------------------------------------------- --enable-emf=yes --x-libraries=/usr/local/lib --x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ENV ------------------------------------------------------------------------------- XDG_DATA_HOME=/construction/science/chemtool-devel XDG_CONFIG_HOME=/construction/science/chemtool-devel XDG_CACHE_HOME=/construction/science/chemtool-devel/.cache HOME=/construction/science/chemtool-devel TMPDIR="/tmp" PATH=/construction/science/chemtool-devel/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/science/chemtool-devel/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 LANG=en_US.UTF-8 LC_ALL=en_US.UTF-8 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -fcommon -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-I/usr/local/include -I/usr/local/include/libEMF" LDFLAGS=" " LIBS="-L/usr/local/lib" CXX="c++" CXXFLAGS=" -pipe -fcommon -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ARGS ------------------------------------------------------------------------------- MAKE=gmake DESTDIR=/construction/science/chemtool-devel/stage SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: PLIST_SUB ------------------------------------------------------------------------------- PORTEXAMPLES="" GTK2_VERSION="2.10.0" GTK3_VERSION="3.0.0" GTK4_VERSION="4.0.0" OSREL=6.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/chemtool" EXAMPLESDIR="share/examples/chemtool" DATADIR="share/chemtool" WWWDIR="www/chemtool" ETCDIR="etc/chemtool" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: SUB_LIST ------------------------------------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/chemtool DOCSDIR=/usr/local/share/doc/chemtool EXAMPLESDIR=/usr/local/share/examples/chemtool WWWDIR=/usr/local/www/chemtool ETCDIR=/usr/local/etc/chemtool SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: /etc/make.conf ------------------------------------------------------------------------------- DPORTS_BUILDER=yes DISABLE_LICENSES=yes DEFAULT_VERSIONS=ssl=openssl FORCE_PACKAGE=yes DEVELOPER=yes DFLY_STING_XFAIL=yes USE_PACKAGE_DEPENDS_ONLY=yes PORTSDIR=/xports PORT_DBDIR=/options PKG_DBDIR=/var/db/pkg PKG_CACHEDIR=/var/cache/pkg PKG_COMPRESSION_FORMAT=.tgz DEVELOPER=1 WITH_CCACHE_BUILD=yes CCACHE_DIR=/ccache UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=600503 OSVERSION=9999999 OSREL=6.5 _OSRELEASE=6.5-SYNTH DISTDIR=/distfiles WRKDIRPREFIX=/construction BATCH=yes PACKAGE_BUILDING=yes PKG_CREATE_VERBOSE=yes MAKE_JOBS_NUMBER=13 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/ncurses-6.4.pkg ===== Message from ncurses-6.4: -- To get the terminfo database please install the terminfo-db package: pkg install terminfo-db Installing /packages/All/indexinfo-0.3.1.pkg Installing /packages/All/libtextstyle-0.21.1.pkg Installing /packages/All/gettext-runtime-0.21.1.pkg Installing /packages/All/gettext-tools-0.21.1.pkg Installing /packages/All/gmake-4.3_2.pkg Installing /packages/All/pkgconf-1.8.1,1.pkg Installing /packages/All/libXau-1.0.9.pkg Installing /packages/All/xorgproto-2022.1_1.pkg Installing /packages/All/libXdmcp-1.1.3.pkg Installing /packages/All/libxcb-1.15_1.pkg Installing /packages/All/libX11-1.8.6,1.pkg Installing /packages/All/ccache-3.7.12_4.pkg Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc create symlink for gcc (world) create symlink for g++ create symlink for g++ (world) ===== Message from ccache-3.7.12_4: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. Installing /packages/All/libEMF-1.0.13.pkg Installing /packages/All/brotli-1.0.9,1.pkg Installing /packages/All/png-1.6.39.pkg Installing /packages/All/freetype2-2.12.1_2.pkg ===== Message from freetype2-2.12.1_2: -- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. If LONG_PCF_NAMES port's option was enabled, the PCF family names may include the foundry and information whether they contain wide characters. For example, "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at run time with using pcf:no-long-family-names property, if needed. Example: FREETYPE_PROPERTIES=pcf:no-long-family-names=1 How to recreate fontconfig cache with using such environment variable, if needed: # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed). Installing /packages/All/expat-2.5.0.pkg Installing /packages/All/fontconfig-2.14.2,1.pkg Running fc-cache to build fontconfig cache... Installing /packages/All/graphite2-1.3.14.pkg Installing /packages/All/libffi-3.4.4.pkg Installing /packages/All/pcre2-10.42.pkg Installing /packages/All/readline-8.2.1.pkg Installing /packages/All/libxml2-2.10.4.pkg Installing /packages/All/libiconv-1.17.pkg Installing /packages/All/mpdecimal-2.5.1.pkg Installing /packages/All/openssl-1.1.1u,1.pkg Installing /packages/All/python39-3.9.17.pkg ===== Message from python39-3.9.17: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py39-gdbm databases/py-gdbm@py39 py39-sqlite3 databases/py-sqlite3@py39 py39-tkinter x11-toolkits/py-tkinter@py39 Installing /packages/All/glib-2.76.4,2.pkg Generating GIO modules cache Compiling glib schemas No schema files found: doing nothing. Installing /packages/All/harfbuzz-7.3.0.pkg Installing /packages/All/libepoll-shim-0.0.20230411.pkg Installing /packages/All/wayland-1.22.0.pkg ===== Message from wayland-1.22.0: -- Wayland requires XDG_RUNTIME_DIR to be defined to a path that will contain "wayland-%d" unix(4) sockets. This is usually handled by consolekit2 (via ck-launch-session) or pam_xdg (via login). Installing /packages/All/xkeyboard-config-2.34_2.pkg Installing /packages/All/libxkbcommon-1.5.0.pkg ===== Message from libxkbcommon-1.5.0: -- If arrow keys don't work under X11 switch to legacy rules e.g., For sh/bash/ksh/zsh run and (optionally) add into ~/.profile: export XKB_DEFAULT_RULES=xorg For csh/tcsh run and (optionally) add into ~/.login: setenv XKB_DEFAULT_RULES xorg Installing /packages/All/libICE-1.1.0_1,1.pkg Installing /packages/All/libSM-1.2.3,1.pkg Installing /packages/All/dbus-1.14.6,1.pkg ===> Creating groups. Creating group 'messagebus' with gid '556'. ===> Creating users Creating user 'messagebus' with uid '556'. Installing /packages/All/libXext-1.3.4,1.pkg Installing /packages/All/libXfixes-6.0.0.pkg Installing /packages/All/libXi-1.8,1.pkg Installing /packages/All/libXtst-1.2.3_2.pkg Installing /packages/All/at-spi2-core-2.48.0.pkg Installing /packages/All/libglvnd-1.6.0.pkg Installing /packages/All/pixman-0.42.2.pkg Installing /packages/All/libXrender-0.9.10_2.pkg Installing /packages/All/cairo-1.17.4_2,3.pkg Installing /packages/All/libdeflate-1.18.pkg Installing /packages/All/jbigkit-2.1_1.pkg Installing /packages/All/liblz4-1.9.4,1.pkg Installing /packages/All/zstd-1.5.5.pkg Installing /packages/All/jpeg-turbo-2.1.5.1.pkg Installing /packages/All/tiff-4.4.0_1.pkg Installing /packages/All/shared-mime-info-2.2_1.pkg Building the Shared MIME-Info database cache Installing /packages/All/gdk-pixbuf2-2.42.10.pkg Generating gdk-pixbuf modules cache Installing /packages/All/libdaemon-0.14_1.pkg Installing /packages/All/dbus-glib-0.112.pkg Installing /packages/All/gdbm-1.23.pkg Installing /packages/All/libevent-2.1.12.pkg Installing /packages/All/gnome_subr-1.0.pkg Installing /packages/All/avahi-app-0.8_1.pkg ===> Creating groups. Creating group 'avahi' with gid '558'. ===> Creating users Creating user 'avahi' with uid '558'. Installing /packages/All/gmp-6.2.1.pkg Installing /packages/All/nettle-3.9.1.pkg Installing /packages/All/libtasn1-4.19.0.pkg Installing /packages/All/libunistring-1.1.pkg Installing /packages/All/libidn2-2.3.4.pkg Installing /packages/All/p11-kit-0.24.1_2.pkg Installing /packages/All/gnutls-3.7.9.pkg Installing /packages/All/libpaper-1.1.28.pkg Installing /packages/All/cups-2.4.6.pkg ===> Creating groups. Creating group 'cups' with gid '193'. ===> Creating users Creating user 'cups' with uid '193'. Installing /packages/All/fribidi-1.0.13.pkg Installing /packages/All/libdatrie-0.2.13_1.pkg Installing /packages/All/libthai-0.1.29.pkg ===== Message from libthai-0.1.29: -- ===> NOTICE: The libthai port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing Installing /packages/All/libfontenc-1.1.4.pkg Installing /packages/All/mkfontscale-1.2.1.pkg Installing /packages/All/font-bh-ttf-1.0.3_4.pkg Running fc-cache to build fontconfig cache... Installing /packages/All/font-misc-meltho-1.0.3_4.pkg Installing /packages/All/font-misc-ethiopic-1.0.4.pkg Installing /packages/All/encodings-1.0.5,1.pkg Installing /packages/All/dejavu-2.37_1.pkg Running fc-cache to build fontconfig cache... ===== Message from dejavu-2.37_1: -- Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. Installing /packages/All/xorg-fonts-truetype-7.7_1.pkg Installing /packages/All/libXft-2.3.7.pkg Installing /packages/All/pango-1.50.14.pkg Installing /packages/All/hicolor-icon-theme-0.17.pkg Installing /packages/All/gtk-update-icon-cache-3.24.31.pkg Installing /packages/All/libXinerama-1.1.4_2,1.pkg Installing /packages/All/libXrandr-1.5.2.pkg Installing /packages/All/libXcursor-1.2.0.pkg Installing /packages/All/libXdamage-1.1.6.pkg Installing /packages/All/libXcomposite-0.4.6,1.pkg Installing /packages/All/gtk2-2.24.33_1.pkg Installing /packages/All/jasper-4.0.0.pkg Installing /packages/All/perl5-5.32.1_3.pkg Installing /packages/All/netpbm-10.91.01_2.pkg Installing /packages/All/libidn-1.38.pkg Installing /packages/All/jbig2dec-0.19.pkg Installing /packages/All/lcms2-2.15_1.pkg Installing /packages/All/openjpeg-2.5.0.pkg Installing /packages/All/poppler-data-0.4.12.pkg Installing /packages/All/ghostscript9-agpl-base-9.56.1_11.pkg ===== Message from ghostscript9-agpl-base-9.56.1_11: -- This package installs a script named dvipdf that depends on dvips. If you want to use this script you need to install print/tex-dvipsk. Installing /packages/All/libXt-1.2.1,1.pkg Installing /packages/All/libXpm-3.5.15.pkg Installing /packages/All/fig2dev-3.2.8a.pkg SUCCEEDED 00:00:45 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> chemtool-devel-1.7.20050716_12 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> chemtool-devel-1.7.20050716_12 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by chemtool-devel-1.7.20050716_12 for building SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> chemtool-devel-1.7.20050716_12 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by chemtool-devel-1.7.20050716_12 for building => SHA256 Checksum OK for ct17a15.tgz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> chemtool-devel-1.7.20050716_12 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by chemtool-devel-1.7.20050716_12 for building ===> Extracting for chemtool-devel-1.7.20050716_12 => SHA256 Checksum OK for ct17a15.tgz. Extracted Memory Use: 2.53M SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for chemtool-devel-1.7.20050716_12 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> chemtool-devel-1.7.20050716_12 depends on executable: msgfmt - found ===> chemtool-devel-1.7.20050716_12 depends on package: gmake>=4.3 - found ===> chemtool-devel-1.7.20050716_12 depends on package: pkgconf>=1.3.0_1 - found ===> chemtool-devel-1.7.20050716_12 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found ===> chemtool-devel-1.7.20050716_12 depends on file: /usr/local/bin/ccache - found SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- ===> chemtool-devel-1.7.20050716_12 depends on shared library: libEMF.so - found (/usr/local/lib/libEMF.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libfontconfig.so - found (/usr/local/lib/libfontconfig.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libfreetype.so - found (/usr/local/lib/libfreetype.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libharfbuzz.so - found (/usr/local/lib/libharfbuzz.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libintl.so - found (/usr/local/lib/libintl.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libatk-1.0.so - found (/usr/local/lib/libatk-1.0.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libcairo.so - found (/usr/local/lib/libcairo.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libgdk_pixbuf-2.0.so - found (/usr/local/lib/libgdk_pixbuf-2.0.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libglib-2.0.so - found (/usr/local/lib/libglib-2.0.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libintl.so - found (/usr/local/lib/libintl.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libgtk-x11-2.0.so - found (/usr/local/lib/libgtk-x11-2.0.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libpango-1.0.so - found (/usr/local/lib/libpango-1.0.so) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> chemtool-devel-1.7.20050716_12 depends on executable: msgfmt - found ===> chemtool-devel-1.7.20050716_12 depends on package: gmake>=4.3 - found ===> chemtool-devel-1.7.20050716_12 depends on package: pkgconf>=1.3.0_1 - found ===> chemtool-devel-1.7.20050716_12 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found ===> chemtool-devel-1.7.20050716_12 depends on file: /usr/local/bin/ccache - found ===> chemtool-devel-1.7.20050716_12 depends on shared library: libEMF.so - found (/usr/local/lib/libEMF.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libfontconfig.so - found (/usr/local/lib/libfontconfig.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libfreetype.so - found (/usr/local/lib/libfreetype.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libharfbuzz.so - found (/usr/local/lib/libharfbuzz.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libintl.so - found (/usr/local/lib/libintl.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libatk-1.0.so - found (/usr/local/lib/libatk-1.0.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libcairo.so - found (/usr/local/lib/libcairo.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libgdk_pixbuf-2.0.so - found (/usr/local/lib/libgdk_pixbuf-2.0.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libglib-2.0.so - found (/usr/local/lib/libglib-2.0.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libintl.so - found (/usr/local/lib/libintl.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libgtk-x11-2.0.so - found (/usr/local/lib/libgtk-x11-2.0.so) ===> chemtool-devel-1.7.20050716_12 depends on shared library: libpango-1.0.so - found (/usr/local/lib/libpango-1.0.so) ===> Configuring for chemtool-devel-1.7.20050716_12 configure: loading site script /xports/Templates/config.site checking for gcc... cc checking for C compiler default output... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ANSI C... none needed checking whether gmake sets ${MAKE}... yes checking for a BSD-compatible install... /usr/bin/install -c checking for cp... /bin/cp checking for rm... /bin/rm checking for main in -libs... no checking for acos in -lm... yes checking for pkg-config... /usr/local/bin/pkg-config checking for GTK version and compile options ... -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/harfbuzz -I/usr/local/include/freetype2 -I/usr/local/include/libpng16 -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -D_THREAD_SAFE -pthread -D_THREAD_SAFE -D_THREAD_SAFE checking how to run the C preprocessor... cpp checking for X... libraries /usr/local/lib, headers /usr/local/include checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for egrep... grep -E checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking libintl.h usability... yes checking libintl.h presence... yes checking for libintl.h... yes checking for an ANSI C-conforming const... yes checking for size_t... (cached) yes checking whether struct tm is in sys/time.h or time.h... time.h checking for working POSIX fnmatch... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for getpagesize... (cached) yes checking for working mmap... yes checking for getcwd... (cached) yes checking for getwd... (cached) yes checking for mkdir... yes checking for strtod... (cached) yes checking for strtol... (cached) yes checking for KDE ... no checking for GNOME ... no checking for MySQL support... no checking whether to enable locales... yes checking whether to enable libundo... yes checking whether to use pull-down menus... yes checking whether to enable emf output... yes checking whether standard GTK dialogs should be used instead of our own... yes configure: creating ./config.status config.status: creating Makefile config.status: creating src-cht/Makefile config.status: creating config.h SUCCEEDED 00:00:06 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for chemtool-devel-1.7.20050716_12 gmake[1]: Entering directory '/construction/science/chemtool-devel/chemtool-1.7alpha15' cc -O2 -Wall -Wunused -Wuninitialized -pipe -fcommon -O2 -fno-strict-aliasing -I/usr/local/include -I/usr/local/include/libEMF -I. -DGTK2 -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/harfbuzz -I/usr/local/include/freetype2 -I/usr/local/include/libpng16 -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -D_THREAD_SAFE -pthread -D_THREAD_SAFE -D_THREAD_SAFE -DHAVE_CONFIG_H -DLOCALEDIR=\"/usr/local/share/locale\" -c -o main.o main.c cc -O2 -Wall -Wunused -Wuninitialized -pipe -fcommon -O2 -fno-strict-aliasing -I/usr/local/include -I/usr/local/include/libEMF -I. -DGTK2 -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/harfbuzz -I/usr/local/include/freetype2 -I/usr/local/include/libpng16 -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -D_THREAD_SAFE -pthread -D_THREAD_SAFE -D_THREAD_SAFE -DHAVE_CONFIG_H -DLOCALEDIR=\"/usr/local/share/locale\" -c -o chemproc.o chemproc.c cc -O2 -Wall -Wunused -Wuninitialized -pipe -fcommon -O2 -fno-strict-aliasing -I/usr/local/include -I/usr/local/include/libEMF -I. -DGTK2 -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/harfbuzz -I/usr/local/include/freetype2 -I/usr/local/include/libpng16 -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -D_THREAD_SAFE -pthread -D_THREAD_SAFE -D_THREAD_SAFE -DHAVE_CONFIG_H -DLOCALEDIR=\"/usr/local/share/locale\" -c -o graph.o graph.c cc -O2 -Wall -Wunused -Wuninitialized -pipe -fcommon -O2 -fno-strict-aliasing -I/usr/local/include -I/usr/local/include/libEMF -I. -DGTK2 -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/harfbuzz -I/usr/local/include/freetype2 -I/usr/local/include/libpng16 -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -D_THREAD_SAFE -pthread -D_THREAD_SAFE -D_THREAD_SAFE -DHAVE_CONFIG_H -DLOCALEDIR=\"/usr/local/share/locale\" -c -o draw.o draw.c cc -O2 -Wall -Wunused -Wuninitialized -pipe -fcommon -O2 -fno-strict-aliasing -I/usr/local/include -I/usr/local/include/libEMF -I. -DGTK2 -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/harfbuzz -I/usr/local/include/freetype2 -I/usr/local/include/libpng16 -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -D_THREAD_SAFE -pthread -D_THREAD_SAFE -D_THREAD_SAFE -DHAVE_CONFIG_H -DLOCALEDIR=\"/usr/local/share/locale\" -c -o inout.o inout.c cc -O2 -Wall -Wunused -Wuninitialized -pipe -fcommon -O2 -fno-strict-aliasing -I/usr/local/include -I/usr/local/include/libEMF -I. -DGTK2 -I/usr/local/include/gtk-2.0 -I/usr/local/include/pango-1.0 -I/usr/local/include -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/harfbuzz -I/usr/local/include/freetype2 -I/usr/local/include/libpng16 -I/usr/local/include/fribidi -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -D_THREAD_SAFE -I/usr/local/include/gdk-pixbuf-2.0 -I/usr/local/include/atk-1.0 -D_THREAD_SAFE -pthread -D_THREAD_SAFE -D_THREAD_SAFE -DHAVE_CONFIG_H -DLOCALEDIR=\"/usr/local/share/locale\" -c -o undo.o undo.c cd src-cht;gmake gmake[2]: Entering directory '/construction/science/chemtool-devel/chemtool-1.7alpha15/src-cht' cc -pipe -fcommon -O2 -fno-strict-aliasing cht-2.5.c -o cht cht-2.5.c:2921:1: warning: return type defaults to 'int' [-Wimplicit-int] main(argc, argv) ^~~~ In file included from /usr/local/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/local/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/local/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/local/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/local/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/local/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/local/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:33, from ct1.h:9, from draw.c:7: /usr/local/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] void gtk_type_init (GTypeDebugFlags debug_flags); ^~~~ In file included from /usr/local/include/glib-2.0/gobject/gobject.h:26, from /usr/local/include/glib-2.0/gobject/gbinding.h:31, from /usr/local/include/glib-2.0/glib-object.h:24, from /usr/local/include/glib-2.0/gio/gioenums.h:30, from /usr/local/include/glib-2.0/gio/giotypes.h:30, from /usr/local/include/glib-2.0/gio/gio.h:28, from /usr/local/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/local/include/gtk-2.0/gdk/gdk.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:32, from ct1.h:9, from draw.c:7: /usr/local/include/glib-2.0/gobject/gtype.h:723:1: note: declared here { ^ In file included from /usr/local/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/local/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/local/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/local/include/gtk-2.0/gtk/gtk.h:126, from ct1.h:9, from draw.c:7: /usr/local/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] GTimeVal last_popdown; ^~~~~~~~ In file included from /usr/local/include/glib-2.0/glib/galloca.h:34, from /usr/local/include/glib-2.0/glib.h:32, from /usr/local/include/glib-2.0/gobject/gbinding.h:30, from /usr/local/include/glib-2.0/glib-object.h:24, from /usr/local/include/glib-2.0/gio/gioenums.h:30, from /usr/local/include/glib-2.0/gio/giotypes.h:30, from /usr/local/include/glib-2.0/gio/gio.h:28, from /usr/local/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/local/include/gtk-2.0/gdk/gdk.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:32, from ct1.h:9, from draw.c:7: /usr/local/include/glib-2.0/glib/gtypes.h:580:8: note: declared here struct _GTimeVal ^~~~~~~~~ draw.c: In function 'Add_ring': draw.c:134:10: warning: variable 'a' set but not used [-Wunused-but-set-variable] double a; /* temp angle used for aromates */ ^ draw.c: In function 'Add_double': draw.c:385:11: warning: variable 'dy' set but not used [-Wunused-but-set-variable] int dx, dy; ^~ draw.c:385:7: warning: variable 'dx' set but not used [-Wunused-but-set-variable] int dx, dy; ^~ draw.c: In function 'Add_number': draw.c:1092:17: warning: variable 'coord' set but not used [-Wunused-but-set-variable] struct xy_co *coord; ^~~~~ draw.c:1096:20: warning: '%d' directive output may be truncated writing between 1 and 11 bytes into a region of size 9 [-Wformat-truncation=] snprintf(name,9,"%d",++atnum); ^~ draw.c:1096:19: note: directive argument in the range [-2147483647, 2147483647] snprintf(name,9,"%d",++atnum); ^~~~ draw.c:1096:3: note: 'snprintf' output between 2 and 12 bytes into a destination of size 9 snprintf(name,9,"%d",++atnum); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/local/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/local/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/local/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/local/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/local/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/local/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:33, from ct1.h:9, from chemproc.c:7: /usr/local/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] void gtk_type_init (GTypeDebugFlags debug_flags); ^~~~ In file included from /usr/local/include/glib-2.0/gobject/gobject.h:26, from /usr/local/include/glib-2.0/gobject/gbinding.h:31, from /usr/local/include/glib-2.0/glib-object.h:24, from /usr/local/include/glib-2.0/gio/gioenums.h:30, from /usr/local/include/glib-2.0/gio/giotypes.h:30, from /usr/local/include/glib-2.0/gio/gio.h:28, from /usr/local/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/local/include/gtk-2.0/gdk/gdk.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:32, from ct1.h:9, from chemproc.c:7: /usr/local/include/glib-2.0/gobject/gtype.h:723:1: note: declared here { ^ In file included from /usr/local/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/local/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/local/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/local/include/gtk-2.0/gtk/gtk.h:126, from ct1.h:9, from chemproc.c:7: /usr/local/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] GTimeVal last_popdown; ^~~~~~~~ In file included from /usr/local/include/glib-2.0/glib/galloca.h:34, from /usr/local/include/glib-2.0/glib.h:32, from /usr/local/include/glib-2.0/gobject/gbinding.h:30, from /usr/local/include/glib-2.0/glib-object.h:24, from /usr/local/include/glib-2.0/gio/gioenums.h:30, from /usr/local/include/glib-2.0/gio/giotypes.h:30, from /usr/local/include/glib-2.0/gio/gio.h:28, from /usr/local/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/local/include/gtk-2.0/gdk/gdk.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:32, from ct1.h:9, from chemproc.c:7: /usr/local/include/glib-2.0/glib/gtypes.h:580:8: note: declared here struct _GTimeVal ^~~~~~~~~ chemproc.c: In function 'tidy_mol': chemproc.c:1754:7: warning: variable 'r' set but not used [-Wunused-but-set-variable] int r = 0; ^ In file included from /usr/local/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/local/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/local/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/local/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/local/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/local/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/local/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:33, from ct1.h:9, from graph.c:7: /usr/local/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] void gtk_type_init (GTypeDebugFlags debug_flags); ^~~~ In file included from /usr/local/include/glib-2.0/gobject/gobject.h:26, from /usr/local/include/glib-2.0/gobject/gbinding.h:31, from /usr/local/include/glib-2.0/glib-object.h:24, from /usr/local/include/glib-2.0/gio/gioenums.h:30, from /usr/local/include/glib-2.0/gio/giotypes.h:30, from /usr/local/include/glib-2.0/gio/gio.h:28, from /usr/local/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/local/include/gtk-2.0/gdk/gdk.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:32, from ct1.h:9, from graph.c:7: /usr/local/include/glib-2.0/gobject/gtype.h:723:1: note: declared here { ^ In file included from /usr/local/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/local/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/local/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/local/include/gtk-2.0/gtk/gtk.h:126, from ct1.h:9, from graph.c:7: /usr/local/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] GTimeVal last_popdown; ^~~~~~~~ In file included from /usr/local/include/glib-2.0/glib/galloca.h:34, from /usr/local/include/glib-2.0/glib.h:32, from /usr/local/include/glib-2.0/gobject/gbinding.h:30, from /usr/local/include/glib-2.0/glib-object.h:24, from /usr/local/include/glib-2.0/gio/gioenums.h:30, from /usr/local/include/glib-2.0/gio/giotypes.h:30, from /usr/local/include/glib-2.0/gio/gio.h:28, from /usr/local/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/local/include/gtk-2.0/gdk/gdk.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:32, from ct1.h:9, from graph.c:7: /usr/local/include/glib-2.0/glib/gtypes.h:580:8: note: declared here struct _GTimeVal ^~~~~~~~~ graph.c: In function 'CopyPlane': graph.c:92:16: warning: variable 'update_rect' set but not used [-Wunused-but-set-variable] GdkRectangle update_rect; ^~~~~~~~~~~ graph.c: In function 'Drawstring': graph.c:1530:19: warning: argument to 'sizeof' in 'memset' call is the same expression as the destination; did you mean to provide an explicit length? [-Wsizeof-pointer-memaccess] memset(l,0,sizeof(l)); ^ In file included from /usr/local/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/local/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/local/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/local/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/local/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/local/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/local/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:33, from ct.h:9, from main.c:31: /usr/local/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] void gtk_type_init (GTypeDebugFlags debug_flags); ^~~~ In file included from /usr/local/include/glib-2.0/gobject/gobject.h:26, from /usr/local/include/glib-2.0/gobject/gbinding.h:31, from /usr/local/include/glib-2.0/glib-object.h:24, from /usr/local/include/glib-2.0/gio/gioenums.h:30, from /usr/local/include/glib-2.0/gio/giotypes.h:30, from /usr/local/include/glib-2.0/gio/gio.h:28, from /usr/local/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/local/include/gtk-2.0/gdk/gdk.h:32, from /usr/local/include/gtk-2.0/gdk/gdkprivate.h:30, from /usr/local/include/gtk-2.0/gdk/gdkx.h:30, from main.c:18: /usr/local/include/glib-2.0/gobject/gtype.h:723:1: note: declared here { ^ In file included from /usr/local/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/local/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/local/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/local/include/gtk-2.0/gtk/gtk.h:126, from ct.h:9, from main.c:31: /usr/local/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] GTimeVal last_popdown; ^~~~~~~~ In file included from /usr/local/include/glib-2.0/glib/galloca.h:34, from /usr/local/include/glib-2.0/glib.h:32, from /usr/local/include/glib-2.0/gobject/gbinding.h:30, from /usr/local/include/glib-2.0/glib-object.h:24, from /usr/local/include/glib-2.0/gio/gioenums.h:30, from /usr/local/include/glib-2.0/gio/giotypes.h:30, from /usr/local/include/glib-2.0/gio/gio.h:28, from /usr/local/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/local/include/gtk-2.0/gdk/gdk.h:32, from /usr/local/include/gtk-2.0/gdk/gdkprivate.h:30, from /usr/local/include/gtk-2.0/gdk/gdkx.h:30, from main.c:18: /usr/local/include/glib-2.0/glib/gtypes.h:580:8: note: declared here struct _GTimeVal ^~~~~~~~~ main.c: In function 'key_press_event': main.c:982:2: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ main.c:984:3: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' gtk_signal_emit_stop_by_name (GTK_OBJECT(mainw), ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.c:992:2: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ main.c:994:3: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' gtk_signal_emit_stop_by_name (GTK_OBJECT(mainw), ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.c:1002:2: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ main.c:1004:3: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' gtk_signal_emit_stop_by_name (GTK_OBJECT(mainw), ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.c: In function 'Zoom': main.c:1233:22: warning: comparison with string literal results in unspecified behavior [-Waddress] if ((char *) inout != "0") ^~ main.c: In function 'do_query': main.c:1753:13: warning: Deprecated pre-processor symbol: replace with "g_main_context_iteration" while (g_main_iteration (FALSE)); ^~~~~~~~~~~~~~~~~~~~~~~~~~~ main.c: In function 'Load': main.c:2846:7: warning: the address of 'datamask' will always evaluate as 'true' [-Waddress] if (datamask && (int)strlen (datamask)) ^~~~~~~~ main.c: In function 'Add': main.c:3020:7: warning: the address of 'datamask' will always evaluate as 'true' [-Waddress] if (datamask && (int)strlen (datamask)) ^~~~~~~~ main.c: In function 'main': main.c:6641:7: warning: the address of 'datadir' will always evaluate as 'true' [-Waddress] if (datadir && (int)strlen (datadir) > 1) ^~~~~~~ main.c: In function 'reallysave': main.c:3779:44: warning: '%s' directive output may be truncated writing up to 511 bytes into a region of size 238 [-Wformat-truncation=] snprintf (errtext,255, "Chemtool 1.7a15 (%s)", filename); ^~ ~~~~~~~~ main.c:3779:3: note: 'snprintf' output between 19 and 530 bytes into a destination of size 255 snprintf (errtext,255, "Chemtool 1.7a15 (%s)", filename); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.c: In function 'file_ok_sel': main.c:3710:45: warning: '%s' directive output may be truncated writing up to 511 bytes into a region of size 238 [-Wformat-truncation=] snprintf (errtext,255, "Chemtool 1.7a15 (%s)", filename); ^~ ~~~~~~~~ main.c:3710:4: note: 'snprintf' output between 19 and 530 bytes into a destination of size 255 snprintf (errtext,255, "Chemtool 1.7a15 (%s)", filename); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.c:3675:46: warning: '%s' directive output may be truncated writing up to 511 bytes into a region of size 238 [-Wformat-truncation=] snprintf (errtext, 255, "Chemtool 1.7a15 (%s)", filename); ^~ ~~~~~~~~ main.c:3675:4: note: 'snprintf' output between 19 and 530 bytes into a destination of size 255 snprintf (errtext, 255, "Chemtool 1.7a15 (%s)", filename); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.c:3632:45: warning: '%s' directive output may be truncated writing up to 511 bytes into a region of size 238 [-Wformat-truncation=] snprintf (errtext,255, "Chemtool 1.7a15 (%s)", filename); ^~ ~~~~~~~~ main.c:3632:4: note: 'snprintf' output between 19 and 530 bytes into a destination of size 255 snprintf (errtext,255, "Chemtool 1.7a15 (%s)", filename); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.c:3548:45: warning: '%s' directive output may be truncated writing up to 511 bytes into a region of size 238 [-Wformat-truncation=] snprintf (errtext,255, "Chemtool 1.7a15 (%s)", filename); ^~ ~~~~~~~~ main.c:3548:4: note: 'snprintf' output between 19 and 530 bytes into a destination of size 255 snprintf (errtext,255, "Chemtool 1.7a15 (%s)", filename); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.c:3519:45: warning: '%s' directive output may be truncated writing up to 511 bytes into a region of size 238 [-Wformat-truncation=] snprintf (errtext,255, "Chemtool 1.7a15 (%s)", filename); ^~ ~~~~~~~~ main.c:3519:4: note: 'snprintf' output between 19 and 530 bytes into a destination of size 255 snprintf (errtext,255, "Chemtool 1.7a15 (%s)", filename); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.c:3508:7: warning: 'strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=] strncpy (datadir, filename, strlen (filename) - strlen (tempstr) + 1); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.c:3508:35: note: length computed here strncpy (datadir, filename, strlen (filename) - strlen (tempstr) + 1); ^~~~~~~~~~~~~~~~~ main.c: In function 'do_query': main.c:1758:3: warning: '__builtin_memcpy' forming offset [52, 53] is out of the bounds [0, 51] of object 'formula' with type 'char[51]' [-Warray-bounds] strcpy (formula, "program checkmol not available or unable to write to"); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from main.c:31: ct.h:257:6: note: 'formula' declared here char formula[51],weight[21],eweight[21],compos[65]; ^~~~~~~ main.c: In function 'main': main.c:5911:33: warning: '%d' directive output may be truncated writing between 1 and 10 bytes into a region of size 3 [-Wformat-truncation=] snprintf (bondnums[i],3, "%d", ii); ^~ main.c:5911:32: note: directive argument in the range [0, 2147483647] snprintf (bondnums[i],3, "%d", ii); ^~~~ main.c:5911:7: note: 'snprintf' output between 2 and 11 bytes into a destination of size 3 snprintf (bondnums[i],3, "%d", ii); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/construction/science/chemtool-devel/chemtool-1.7alpha15/src-cht' In file included from /usr/local/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/local/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/local/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/local/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/local/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/local/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/local/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:33, from ct1.h:9, from inout.c:6: /usr/local/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] void gtk_type_init (GTypeDebugFlags debug_flags); ^~~~ In file included from /usr/local/include/glib-2.0/gobject/gobject.h:26, from /usr/local/include/glib-2.0/gobject/gbinding.h:31, from /usr/local/include/glib-2.0/glib-object.h:24, from /usr/local/include/glib-2.0/gio/gioenums.h:30, from /usr/local/include/glib-2.0/gio/giotypes.h:30, from /usr/local/include/glib-2.0/gio/gio.h:28, from /usr/local/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/local/include/gtk-2.0/gdk/gdk.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:32, from ct1.h:9, from inout.c:6: /usr/local/include/glib-2.0/gobject/gtype.h:723:1: note: declared here { ^ In file included from /usr/local/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/local/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/local/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/local/include/gtk-2.0/gtk/gtk.h:126, from ct1.h:9, from inout.c:6: /usr/local/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] GTimeVal last_popdown; ^~~~~~~~ In file included from /usr/local/include/glib-2.0/glib/galloca.h:34, from /usr/local/include/glib-2.0/glib.h:32, from /usr/local/include/glib-2.0/gobject/gbinding.h:30, from /usr/local/include/glib-2.0/glib-object.h:24, from /usr/local/include/glib-2.0/gio/gioenums.h:30, from /usr/local/include/glib-2.0/gio/giotypes.h:30, from /usr/local/include/glib-2.0/gio/gio.h:28, from /usr/local/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/local/include/gtk-2.0/gdk/gdk.h:32, from /usr/local/include/gtk-2.0/gtk/gtk.h:32, from ct1.h:9, from inout.c:6: /usr/local/include/glib-2.0/glib/gtypes.h:580:8: note: declared here struct _GTimeVal ^~~~~~~~~ inout.c: In function 'import_mdl_mol': inout.c:981:22: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] sprintf(atcode[pdbn],"%sH_%d",atcode[pdbn],hhh-1); ~~~~~~^~~~~~ ~~~~~~~~~~~~ inout.c:982:27: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] if (hhh==2)sprintf(atcode[pdbn],"%sH",atcode[pdbn]); ~~~~~~^~~~~~ ~~~~~~~~~~~~ inout.c: In function 'export_emf': inout.c:2787:35: warning: variable 'rval' set but not used [-Wunused-but-set-variable] int ha,fzoom,xpos,chl,nsub,nsup,rval,l; ^~~~ inout.c: In function 'check_babel': inout.c:5589:15: warning: variable 'stop' set but not used [-Wunused-but-set-variable] int start=0,stop=0; ^~~~ inout.c: In function 'export_fw': inout.c:5182:31: warning: '%s' directive output may be truncated writing up to 511 bytes into a region of size 251 [-Wformat-truncation=] snprintf (com,255, "cht %s", xfile); ^~ ~~~~~ inout.c:5182:7: note: 'snprintf' output between 5 and 516 bytes into a destination of size 255 snprintf (com,255, "cht %s", xfile); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ inout.c: In function 'export_checkmol': inout.c:5325:39: warning: '%s' directive output may be truncated writing up to 511 bytes into a region of size 243 [-Wformat-truncation=] snprintf (com,255, "matchmol -s %s %s", xfile,candidate); ^~ ~~~~~ inout.c:5325:7: note: 'snprintf' output between 14 and 644 bytes into a destination of size 255 snprintf (com,255, "matchmol -s %s %s", xfile,candidate); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cc main.o chemproc.o graph.o draw.o inout.o undo.o -L/usr/local/lib -lgtk-x11-2.0 -lgdk-x11-2.0 -lpangocairo-1.0 -latk-1.0 -lcairo -lgdk_pixbuf-2.0 -lgio-2.0 -lpangoft2-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lintl -lharfbuzz -lfontconfig -lfreetype -lEMF -lstdc++ -lm -L/usr/local/lib -lX11 -o chemtool gmake[1]: Leaving directory '/construction/science/chemtool-devel/chemtool-1.7alpha15' SUCCEEDED 00:00:07 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> chemtool-devel-1.7.20050716_12 depends on executable: fig2dev - found ===> chemtool-devel-1.7.20050716_12 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for chemtool-devel-1.7.20050716_12 ===> chemtool-devel-1.7.20050716_12 depends on executable: fig2dev - found ===> chemtool-devel-1.7.20050716_12 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found ===> Generating temporary packing list gmake[1]: Entering directory '/construction/science/chemtool-devel/chemtool-1.7alpha15' /usr/bin/install -c -d /construction/science/chemtool-devel/stage/usr/local/bin /construction/science/chemtool-devel/stage/usr/local/man/man1 /usr/bin/install -c chemtool src-cht/cht /construction/science/chemtool-devel/stage/usr/local/bin /usr/bin/install -c chemtool.1 /construction/science/chemtool-devel/stage/usr/local/man/man1 /usr/bin/install -c cht.1 /construction/science/chemtool-devel/stage/usr/local/man/man1 for L in `ls locales`; do /usr/bin/install -c -d /construction/science/chemtool-devel/stage/usr/local/share/locale/$L/LC_MESSAGES; /usr/bin/install -c -m664 locales/$L/chemtool.mo /construction/science/chemtool-devel/stage/usr/local/share/locale/$L/LC_MESSAGES;done gmake[1]: Leaving directory '/construction/science/chemtool-devel/chemtool-1.7alpha15' /usr/bin/strip /construction/science/chemtool-devel/stage/usr/local/bin/chemtool /usr/bin/strip /construction/science/chemtool-devel/stage/usr/local/bin/cht /bin/mkdir -p /construction/science/chemtool-devel/stage/usr/local/share/examples/chemtool (cd /construction/science/chemtool-devel/chemtool-1.7alpha15//examples && /bin/sh -c '(/usr/bin/find -Ed $1 $3 | /usr/bin/cpio -dumpl $2 >/dev/null 2>&1) && /usr/bin/find -Ed $1 $3 \( -type d -exec /bin/sh -c '\''cd '\''$2'\'' && chmod 755 "$@"'\'' . {} + -o -type f -exec /bin/sh -c '\''cd '\''$2'\'' && chmod 0644 "$@"'\'' . {} + \)' COPYTREE_SHARE . /construction/science/chemtool-devel/stage/usr/local/share/examples/chemtool) ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:02 ------------------------------------------------------------------------------- -- Phase: check-plist ------------------------------------------------------------------------------- ====> Checking for pkg-plist issues (check-plist) ===> Parsing plist ===> Checking for items in STAGEDIR missing from pkg-plist ===> Checking for items in pkg-plist which are not in STAGEDIR ===> No pkg-plist issues found (check-plist) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for chemtool-devel-1.7.20050716_12 file sizes/checksums [50]: 0% file sizes/checksums [50]: 100% Service unavailablepacking files [50]: 0% packing files [50]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:01 TOTAL TIME 00:01:04