------------------------------------------------------------------------------- -- Phase: Environment ------------------------------------------------------------------------------- NO_DEPENDS=1 UNAME_r=6.5 UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=unknown UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 LANG=C HOME=/root USER=root TERM=dumb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: showconfig ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ENV ------------------------------------------------------------------------------- F77="gfortran12" F90="gfortran12" FC="gfortran12" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc12" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc12" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc12" XDG_DATA_HOME=/construction/math/R-cran-sp XDG_CONFIG_HOME=/construction/math/R-cran-sp XDG_CACHE_HOME=/construction/math/R-cran-sp/.cache HOME=/construction/math/R-cran-sp TMPDIR="/tmp" PATH=/construction/math/R-cran-sp/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/math/R-cran-sp/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ARGS ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ENV ------------------------------------------------------------------------------- F77="gfortran12" F90="gfortran12" FC="gfortran12" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc12" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc12" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc12" XDG_DATA_HOME=/construction/math/R-cran-sp XDG_CONFIG_HOME=/construction/math/R-cran-sp XDG_CACHE_HOME=/construction/math/R-cran-sp/.cache HOME=/construction/math/R-cran-sp TMPDIR="/tmp" PATH=/construction/math/R-cran-sp/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/math/R-cran-sp/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ARGS ------------------------------------------------------------------------------- DESTDIR=/construction/math/R-cran-sp/stage SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: PLIST_SUB ------------------------------------------------------------------------------- R_MOD_DIR=lib/R/library/sp OSREL=6.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/sp" EXAMPLESDIR="share/examples/sp" DATADIR="share/sp" WWWDIR="www/sp" ETCDIR="etc/sp" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: SUB_LIST ------------------------------------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/sp DOCSDIR=/usr/local/share/doc/sp EXAMPLESDIR=/usr/local/share/examples/sp WWWDIR=/usr/local/www/sp ETCDIR=/usr/local/etc/sp SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: /etc/make.conf ------------------------------------------------------------------------------- DPORTS_BUILDER=yes DISABLE_LICENSES=yes DEFAULT_VERSIONS=ssl=openssl FORCE_PACKAGE=yes DEVELOPER=yes DFLY_STING_XFAIL=yes USE_PACKAGE_DEPENDS_ONLY=yes PORTSDIR=/xports PORT_DBDIR=/options PKG_DBDIR=/var/db/pkg PKG_CACHEDIR=/var/cache/pkg PKG_COMPRESSION_FORMAT=.tgz DEVELOPER=1 WITH_CCACHE_BUILD=yes CCACHE_DIR=/ccache UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=600503 OSVERSION=9999999 OSREL=6.5 _OSRELEASE=6.5-SYNTH DISTDIR=/distfiles WRKDIRPREFIX=/construction BATCH=yes PACKAGE_BUILDING=yes PKG_CREATE_VERBOSE=yes MAKE_JOBS_NUMBER=13 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/libnghttp2-1.53.0.pkg Installing /packages/All/openssl-1.1.1u,1.pkg Installing /packages/All/libssh2-1.11.0,3.pkg Installing /packages/All/indexinfo-0.3.1.pkg Installing /packages/All/libunistring-1.1.pkg Installing /packages/All/libidn2-2.3.4.pkg Installing /packages/All/libpsl-0.21.2_3.pkg Installing /packages/All/ca_root_nss-3.89.1.pkg ===== Message from ca_root_nss-3.89.1: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem Installing /packages/All/curl-8.1.2.pkg Installing /packages/All/pcre2-10.42.pkg Installing /packages/All/brotli-1.0.9,1.pkg Installing /packages/All/png-1.6.39.pkg Installing /packages/All/freetype2-2.12.1_2.pkg ===== Message from freetype2-2.12.1_2: -- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. If LONG_PCF_NAMES port's option was enabled, the PCF family names may include the foundry and information whether they contain wide characters. For example, "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at run time with using pcf:no-long-family-names property, if needed. Example: FREETYPE_PROPERTIES=pcf:no-long-family-names=1 How to recreate fontconfig cache with using such environment variable, if needed: # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed). Installing /packages/All/graphite2-1.3.14.pkg Installing /packages/All/libffi-3.4.4.pkg Installing /packages/All/gettext-runtime-0.21.1.pkg Installing /packages/All/ncurses-6.4.pkg ===== Message from ncurses-6.4: -- To get the terminfo database please install the terminfo-db package: pkg install terminfo-db Installing /packages/All/readline-8.2.1.pkg Installing /packages/All/libxml2-2.10.4.pkg Installing /packages/All/libiconv-1.17.pkg Installing /packages/All/expat-2.5.0.pkg Installing /packages/All/mpdecimal-2.5.1.pkg Installing /packages/All/python39-3.9.17.pkg ===== Message from python39-3.9.17: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py39-gdbm databases/py-gdbm@py39 py39-sqlite3 databases/py-sqlite3@py39 py39-tkinter x11-toolkits/py-tkinter@py39 Installing /packages/All/glib-2.76.4,2.pkg Generating GIO modules cache Compiling glib schemas No schema files found: doing nothing. Installing /packages/All/harfbuzz-7.3.0.pkg Installing /packages/All/icu-73.2,1.pkg Installing /packages/All/libdeflate-1.18.pkg Installing /packages/All/jbigkit-2.1_1.pkg Installing /packages/All/liblz4-1.9.4,1.pkg Installing /packages/All/zstd-1.5.5.pkg Installing /packages/All/jpeg-turbo-2.1.5.1.pkg Installing /packages/All/tiff-4.4.0_1.pkg Installing /packages/All/fontconfig-2.14.2,1.pkg Running fc-cache to build fontconfig cache... Installing /packages/All/libXau-1.0.9.pkg Installing /packages/All/xorgproto-2022.1_1.pkg Installing /packages/All/libXdmcp-1.1.3.pkg Installing /packages/All/libxcb-1.15_1.pkg Installing /packages/All/libX11-1.8.6,1.pkg Installing /packages/All/libXext-1.3.4,1.pkg Installing /packages/All/libglvnd-1.6.0.pkg Installing /packages/All/pixman-0.42.2.pkg Installing /packages/All/libXrender-0.9.10_2.pkg Installing /packages/All/cairo-1.17.4_2,3.pkg Installing /packages/All/fribidi-1.0.13.pkg Installing /packages/All/libdatrie-0.2.13_1.pkg Installing /packages/All/libthai-0.1.29.pkg ===== Message from libthai-0.1.29: -- ===> NOTICE: The libthai port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing Installing /packages/All/libfontenc-1.1.4.pkg Installing /packages/All/mkfontscale-1.2.1.pkg Installing /packages/All/font-bh-ttf-1.0.3_4.pkg Running fc-cache to build fontconfig cache... Installing /packages/All/font-misc-meltho-1.0.3_4.pkg Installing /packages/All/font-misc-ethiopic-1.0.4.pkg Installing /packages/All/encodings-1.0.5,1.pkg Installing /packages/All/dejavu-2.37_1.pkg Running fc-cache to build fontconfig cache... ===== Message from dejavu-2.37_1: -- Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. Installing /packages/All/xorg-fonts-truetype-7.7_1.pkg Installing /packages/All/libXft-2.3.7.pkg Installing /packages/All/pango-1.50.14.pkg Installing /packages/All/tcl86-8.6.13.pkg Installing /packages/All/libXScrnSaver-1.2.4.pkg Installing /packages/All/tk86-8.6.13.pkg Installing /packages/All/libuv-1.46.0.pkg Installing /packages/All/rhash-1.4.3.pkg Installing /packages/All/pkg-1.19.2.pkg Installing /packages/All/libarchive-3.6.2,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/cmake-core-3.26.1_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/gmake-4.3_2.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/gmp-6.2.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/mpfr-4.2.0_1,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/mpc-1.3.1_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/binutils-2.40_4,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/gcc12-12.2.0_6.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===== Message from gcc12-12.2.0_6: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc12 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/libidn-1.38.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/jbig2dec-0.19.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/lcms2-2.15_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/openjpeg-2.5.0.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libpaper-1.1.28.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libdaemon-0.14_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libICE-1.1.0_1,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libSM-1.2.3,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/dbus-1.14.6,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===> Creating groups. Creating group 'messagebus' with gid '556'. ===> Creating users Creating user 'messagebus' with uid '556'. Installing /packages/All/dbus-glib-0.112.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/gdbm-1.23.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libevent-2.1.12.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/gnome_subr-1.0.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/avahi-app-0.8_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===> Creating groups. Creating group 'avahi' with gid '558'. ===> Creating users Creating user 'avahi' with uid '558'. Installing /packages/All/nettle-3.9.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libtasn1-4.19.0.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/p11-kit-0.24.1_2.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/gnutls-3.7.9.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/cups-2.4.6.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===> Creating groups. Creating group 'cups' with gid '193'. ===> Creating users Creating user 'cups' with uid '193'. Installing /packages/All/poppler-data-0.4.12.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/ghostscript9-agpl-base-9.56.1_11.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===== Message from ghostscript9-agpl-base-9.56.1_11: -- This package installs a script named dvipdf that depends on dvips. If you want to use this script you need to install print/tex-dvipsk. Installing /packages/All/libXt-1.2.1,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libXmu-1.1.3,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/R-4.3.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:00:37 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> R-cran-sp-2.0.0 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> R-cran-sp-2.0.0 depends on file: /usr/local/sbin/pkg - found => sp_2.0-0.tar.gz doesn't seem to exist in /distfiles/. => Attempting to fetch https://cloud.r-project.org/src/contrib/sp_2.0-0.tar.gz sp_2.0-0.tar.gz 0% of 1134 kB 0 Bps sp_2.0-0.tar.gz 1134 kB 4452 kBps 00s ===> Fetching all distfiles required by R-cran-sp-2.0.0 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> R-cran-sp-2.0.0 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by R-cran-sp-2.0.0 for building => SHA256 Checksum OK for sp_2.0-0.tar.gz. SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> R-cran-sp-2.0.0 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by R-cran-sp-2.0.0 for building ===> Extracting for R-cran-sp-2.0.0 => SHA256 Checksum OK for sp_2.0-0.tar.gz. Extracted Memory Use: 3.38M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for R-cran-sp-2.0.0 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> R-cran-sp-2.0.0 depends on file: /usr/local/bin/R - found ===> R-cran-sp-2.0.0 depends on executable: gfortran12 - found ===> R-cran-sp-2.0.0 depends on file: /usr/local/bin/as - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> R-cran-sp-2.0.0 depends on file: /usr/local/bin/R - found ===> R-cran-sp-2.0.0 depends on executable: gfortran12 - found ===> R-cran-sp-2.0.0 depends on file: /usr/local/bin/as - found ===> Configuring for R-cran-sp-2.0.0 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> R-cran-sp-2.0.0 depends on file: /usr/local/bin/R - found ===> R-cran-sp-2.0.0 depends on executable: gfortran12 - found SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for R-cran-sp-2.0.0 ===> R-cran-sp-2.0.0 depends on file: /usr/local/bin/R - found ===> R-cran-sp-2.0.0 depends on executable: gfortran12 - found ===> Generating temporary packing list * installing *source* package 'sp' ... ** package 'sp' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'cc 8.3 [DragonFly] Release/2019-02-22' gmake[1]: Entering directory '/construction/math/R-cran-sp/sp/src' cc -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -isystem /usr/local/include -fno-strict-aliasing -c Rcentroid.c -o Rcentroid.o cc -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -isystem /usr/local/include -fno-strict-aliasing -c gcdist.c -o gcdist.o cc -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -isystem /usr/local/include -fno-strict-aliasing -c init.c -o init.o cc -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -isystem /usr/local/include -fno-strict-aliasing -c pip.c -o pip.o cc -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -isystem /usr/local/include -fno-strict-aliasing -c pip2.c -o pip2.o cc -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -isystem /usr/local/include -fno-strict-aliasing -c sp_xports.c -o sp_xports.o cc -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -isystem /usr/local/include -fno-strict-aliasing -c surfaceArea.c -o surfaceArea.o cc -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -pipe -DLIBICONV_PLUG -O2 -isystem /usr/local/include -fno-strict-aliasing -c zerodist.c -o zerodist.o cc -shared -L/usr/local/lib/R/lib -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -L/usr/local/lib -o sp.so Rcentroid.o gcdist.o init.o pip.o pip2.o sp_xports.o surfaceArea.o zerodist.o -L/usr/local/lib/R/lib -lR gmake[1]: Leaving directory '/construction/math/R-cran-sp/sp/src' installing to /construction/math/R-cran-sp/stage/usr/local/lib/R/library/00LOCK-sp/00new/sp/libs ** R ** data ** demo ** inst ** tests ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sp) /usr/bin/find /construction/math/R-cran-sp/stage/usr/local/lib/R/library/sp -name '*.so' -exec /usr/bin/strip {} + ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Error: /usr/local/lib/R/library/sp/libs/sp.so is linked to /usr/local/lib/libintl.so.8 from devel/gettext-runtime but it is not declared as a dependency Warning: you need USES+=gettext-runtime Error: /usr/local/lib/R/library/sp/libs/sp.so is linked to /usr/local/lib/libreadline.so.8 from devel/readline but it is not declared as a dependency Warning: you need USES+=readline Error: /usr/local/lib/R/library/sp/libs/sp.so is linked to /usr/local/lib/libpcre2-8.so.0 from devel/pcre2 but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libpcre2-8.so:devel/pcre2 Error: /usr/local/lib/R/library/sp/libs/sp.so is linked to /usr/local/lib/libicuuc.so.73 from devel/icu but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libicuuc.so:devel/icu Error: /usr/local/lib/R/library/sp/libs/sp.so is linked to /usr/local/lib/libicui18n.so.73 from devel/icu but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libicui18n.so:devel/icu Error: /usr/local/lib/R/library/sp/libs/sp.so is linked to /usr/local/lib/libncurses.so.6 from devel/ncurses but it is not declared as a dependency Warning: you need USES+=ncurses Error: /usr/local/lib/R/library/sp/libs/sp.so is linked to /usr/local/lib/libtinfo.so.6 from devel/ncurses but it is not declared as a dependency Warning: you need USES+=ncurses Error: /usr/local/lib/R/library/sp/libs/sp.so is linked to /usr/local/lib/libicudata.so.73 from devel/icu but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libicudata.so:devel/icu Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:40 ------------------------------------------------------------------------------- -- Phase: check-plist ------------------------------------------------------------------------------- ====> Checking for pkg-plist issues (check-plist) ===> Parsing plist ===> Checking for items in STAGEDIR missing from pkg-plist ===> Checking for items in pkg-plist which are not in STAGEDIR ===> No pkg-plist issues found (check-plist) SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for R-cran-sp-2.0.0 file sizes/checksums [83]: 0% file sizes/checksums [83]: 100% Service unavailablepacking files [83]: 0% packing files [83]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:00 TOTAL TIME 00:01:22