------------------------------------------------------------------------------- -- Phase: Environment ------------------------------------------------------------------------------- NO_DEPENDS=1 FLAVOR=py39 UNAME_r=6.5 UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=unknown UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 LANG=C HOME=/root USER=root TERM=dumb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: showconfig ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ENV ------------------------------------------------------------------------------- PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/construction/databases/py-tiledb XDG_CONFIG_HOME=/construction/databases/py-tiledb XDG_CACHE_HOME=/construction/databases/py-tiledb/.cache HOME=/construction/databases/py-tiledb TMPDIR="/tmp" PATH=/construction/databases/py-tiledb/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/databases/py-tiledb/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 CMAKE_PREFIX_PATH="/usr/local" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ARGS ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ENV ------------------------------------------------------------------------------- TILEDB_PATH=/usr/local XDG_DATA_HOME=/construction/databases/py-tiledb XDG_CONFIG_HOME=/construction/databases/py-tiledb XDG_CACHE_HOME=/construction/databases/py-tiledb/.cache HOME=/construction/databases/py-tiledb TMPDIR="/tmp" PATH=/construction/databases/py-tiledb/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/databases/py-tiledb/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" " LIBS="-L/usr/local/lib" CXX="c++" CXXFLAGS=" -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ARGS ------------------------------------------------------------------------------- DESTDIR=/construction/databases/py-tiledb/stage SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: PLIST_SUB ------------------------------------------------------------------------------- PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=dragonfly6 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=6.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/py39-tiledb" EXAMPLESDIR="share/examples/py39-tiledb" DATADIR="share/py39-tiledb" WWWDIR="www/py39-tiledb" ETCDIR="etc/py39-tiledb" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: SUB_LIST ------------------------------------------------------------------------------- PYTHON_INCLUDEDIR=/usr/local/include/python3.9 PYTHON_LIBDIR=/usr/local/lib/python3.9 PYTHON_PLATFORM=dragonfly6 PYTHON_SITELIBDIR=/usr/local/lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/py39-tiledb DOCSDIR=/usr/local/share/doc/py39-tiledb EXAMPLESDIR=/usr/local/share/examples/py39-tiledb WWWDIR=/usr/local/www/py39-tiledb ETCDIR=/usr/local/etc/py39-tiledb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: /etc/make.conf ------------------------------------------------------------------------------- DPORTS_BUILDER=yes DISABLE_LICENSES=yes DEFAULT_VERSIONS=ssl=openssl FORCE_PACKAGE=yes DEVELOPER=yes DFLY_STING_XFAIL=yes USE_PACKAGE_DEPENDS_ONLY=yes PORTSDIR=/xports PORT_DBDIR=/options PKG_DBDIR=/var/db/pkg PKG_CACHEDIR=/var/cache/pkg PKG_COMPRESSION_FORMAT=.tgz DEVELOPER=1 WITH_CCACHE_BUILD=yes CCACHE_DIR=/ccache UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=600503 OSVERSION=9999999 OSREL=6.5 _OSRELEASE=6.5-SYNTH DISTDIR=/distfiles WRKDIRPREFIX=/construction BATCH=yes PACKAGE_BUILDING=yes PKG_CREATE_VERBOSE=yes MAKE_JOBS_NUMBER=13 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/indexinfo-0.3.1.pkg Installing /packages/All/libffi-3.4.4.pkg Installing /packages/All/expat-2.5.0.pkg Installing /packages/All/mpdecimal-2.5.1.pkg Installing /packages/All/ncurses-6.4.pkg ===== Message from ncurses-6.4: -- To get the terminfo database please install the terminfo-db package: pkg install terminfo-db Installing /packages/All/readline-8.2.1.pkg Installing /packages/All/gettext-runtime-0.21.1.pkg Installing /packages/All/openssl-1.1.1u,1.pkg Installing /packages/All/python39-3.9.17.pkg ===== Message from python39-3.9.17: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py39-gdbm databases/py-gdbm@py39 py39-sqlite3 databases/py-sqlite3@py39 py39-tkinter x11-toolkits/py-tkinter@py39 Installing /packages/All/py39-setuptools-63.1.0_1.pkg Installing /packages/All/py39-cython-0.29.35.pkg Installing /packages/All/metis-5.1.0_9.pkg ===== Message from metis-5.1.0_9: -- ===> NOTICE: The metis port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing Installing /packages/All/gmp-6.2.1.pkg Installing /packages/All/mpfr-4.2.0_1,1.pkg Installing /packages/All/mpc-1.3.1_1.pkg UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/liblz4-1.9.4,1.pkg Installing /packages/All/zstd-1.5.5.pkg Installing /packages/All/binutils-2.40_4,1.pkg Installing /packages/All/gcc12-12.2.0_6.pkg ===== Message from gcc12-12.2.0_6: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc12 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/openblas-0.3.20_1,1.pkg Installing /packages/All/suitesparse-config-7.0.1_1.pkg Installing /packages/All/suitesparse-amd-3.0.3_1.pkg Installing /packages/All/suitesparse-camd-3.0.3_1.pkg Installing /packages/All/suitesparse-colamd-3.0.3_1.pkg Installing /packages/All/suitesparse-ccolamd-3.0.3_1.pkg Installing /packages/All/suitesparse-cholmod-4.0.3_1.pkg Installing /packages/All/suitesparse-umfpack-6.1.0_1.pkg Installing /packages/All/py39-numpy-1.24.1_4,1.pkg Installing /packages/All/py39-pybind11-2.10.4.pkg Installing /packages/All/py39-packaging-23.1.pkg Installing /packages/All/py39-tomli-2.0.1_2.pkg Installing /packages/All/py39-setuptools_scm-6.4.2.pkg Installing /packages/All/py39-wheel-0.40.0_1.pkg Installing /packages/All/capnproto080-0.8.0.pkg Installing /packages/All/libnghttp2-1.53.0.pkg Installing /packages/All/libssh2-1.11.0,3.pkg Installing /packages/All/libunistring-1.1.pkg Installing /packages/All/libidn2-2.3.4.pkg Installing /packages/All/libpsl-0.21.2_3.pkg Installing /packages/All/ca_root_nss-3.89.1.pkg ===== Message from ca_root_nss-3.89.1: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem Installing /packages/All/curl-8.1.2.pkg Installing /packages/All/libfmt-9.1.0.pkg Installing /packages/All/catch2-3.3.2.pkg Installing /packages/All/clipp-1.2.3.pkg Installing /packages/All/spdlog-1.11.0_1.pkg Installing /packages/All/tiledb-2.15.4.pkg Installing /packages/All/cmake-doc-3.26.1.pkg Installing /packages/All/cmake-man-3.26.1.pkg Installing /packages/All/libuv-1.46.0.pkg Installing /packages/All/rhash-1.4.3.pkg Installing /packages/All/pkg-1.19.2.pkg Installing /packages/All/libarchive-3.6.2,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/cmake-core-3.26.1_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/cmake-3.26.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/py39-pyproject_hooks-1.0.0_2.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/py39-build-0.10.0_2.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/py39-installer-0.7.0.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/ccache-3.7.12_4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc create symlink for gcc (world) create symlink for g++ create symlink for g++ (world) create symlink for gcc12 create symlink for gcc12 (world) create symlink for g++12 create symlink for g++12 (world) create symlink for cpp12 create symlink for cpp12 (world) ===== Message from ccache-3.7.12_4: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:00:21 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> py39-tiledb-0.21.5 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> py39-tiledb-0.21.5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-tiledb-0.21.5 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> py39-tiledb-0.21.5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-tiledb-0.21.5 for building => SHA256 Checksum OK for tiledb-0.21.5.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> py39-tiledb-0.21.5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-tiledb-0.21.5 for building ===> Extracting for py39-tiledb-0.21.5 ===> py39-tiledb-0.21.5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-tiledb-0.21.5 for building => SHA256 Checksum OK for tiledb-0.21.5.tar.gz. Extracted Memory Use: 1.80M SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for py39-tiledb-0.21.5 ===> Applying ports patches for py39-tiledb-0.21.5 from /xports/databases/py-tiledb/files /usr/bin/env WRKSRC=/construction/databases/py-tiledb/tiledb-0.21.5 REWARNFILE=/construction/databases/py-tiledb/reinplace_warnings.txt /bin/sh /xports/Mk/Scripts/sed_checked.sh -e 's@=c++11@=gnu++17@g' /construction/databases/py-tiledb/tiledb-0.21.5/setup.py SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> py39-tiledb-0.21.5 depends on package: py39-cython>=0.27 - found ===> py39-tiledb-0.21.5 depends on package: py39-numpy>=1.23.2,1 - found ===> py39-tiledb-0.21.5 depends on package: py39-pybind11>=2.6.2 - found ===> py39-tiledb-0.21.5 depends on package: py39-setuptools>=42 - found ===> py39-tiledb-0.21.5 depends on package: py39-setuptools_scm>=1.5.4 - found ===> py39-tiledb-0.21.5 depends on package: py39-wheel>=0 - found ===> py39-tiledb-0.21.5 depends on package: tiledb>=2.15.4 - found ===> py39-tiledb-0.21.5 depends on executable: cmake - found ===> py39-tiledb-0.21.5 depends on executable: cython-3.9 - found ===> py39-tiledb-0.21.5 depends on file: /usr/local/bin/python3.9 - found ===> py39-tiledb-0.21.5 depends on package: py39-build>=0 - found ===> py39-tiledb-0.21.5 depends on package: py39-installer>=0 - found ===> py39-tiledb-0.21.5 depends on file: /usr/local/bin/ccache - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- ===> py39-tiledb-0.21.5 depends on shared library: libtiledb.so - found (/usr/local/lib/libtiledb.so) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> py39-tiledb-0.21.5 depends on package: py39-cython>=0.27 - found ===> py39-tiledb-0.21.5 depends on package: py39-numpy>=1.23.2,1 - found ===> py39-tiledb-0.21.5 depends on package: py39-pybind11>=2.6.2 - found ===> py39-tiledb-0.21.5 depends on package: py39-setuptools>=42 - found ===> py39-tiledb-0.21.5 depends on package: py39-setuptools_scm>=1.5.4 - found ===> py39-tiledb-0.21.5 depends on package: py39-wheel>=0 - found ===> py39-tiledb-0.21.5 depends on package: tiledb>=2.15.4 - found ===> py39-tiledb-0.21.5 depends on executable: cmake - found ===> py39-tiledb-0.21.5 depends on executable: cython-3.9 - found ===> py39-tiledb-0.21.5 depends on file: /usr/local/bin/python3.9 - found ===> py39-tiledb-0.21.5 depends on package: py39-build>=0 - found ===> py39-tiledb-0.21.5 depends on package: py39-installer>=0 - found ===> py39-tiledb-0.21.5 depends on file: /usr/local/bin/ccache - found ===> py39-tiledb-0.21.5 depends on shared library: libtiledb.so - found (/usr/local/lib/libtiledb.so) ===> Configuring for py39-tiledb-0.21.5 SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for py39-tiledb-0.21.5 * Getting build dependencies for wheel... TILEDB_PATH from env: '/usr/local' TILEDB_PATH in block before: '/usr/local' TILEDB_PATH in block after: '/usr/local' * Building wheel... TILEDB_PATH from env: '/usr/local' TILEDB_PATH in block before: '/usr/local' TILEDB_PATH in block after: '/usr/local' running bdist_wheel ext_modules: [, , ] tiledb_ext: main_ext: tiledb_cc_ext: tiledb_ext.library_dirs: ['/usr/local/lib'] libtiledb_exists checking 'library_dirs': ['/usr/local/lib'] libtiledb_exists found: '/usr/local/lib/libtiledb.so' prefix_dir: /usr/local do_install: False running build running build_py creating build creating build/lib.dragonfly-6.5-x86_64-cpython-39 creating build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/__init__.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/_generated_version.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/array_schema.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/attribute.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/ctx.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/data_order.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/dataframe_.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/datatypes.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/dimension.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/dimension_label.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/dimension_label_schema.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/domain.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/filestore.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/filter.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/fragment.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/group.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/highlevel.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/multirange_indexing.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/object.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/parquet_.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/query.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/query_condition.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/schema_evolution.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/subarray.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/version_helper.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb copying tiledb/vfs.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb creating build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/__init__.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/check_csv_dir.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/common.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/conftest.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/datatypes.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/strategies.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_array_schema.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_attribute.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_compat.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_context_and_config.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_core.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_dask.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_dimension.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_dimension_label.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_domain.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_domain_index.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_examples.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_filestore.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_filters.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_fixes.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_fragments.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_group.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_hypothesis.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_libtiledb.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_metadata.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_multi_index-hp.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_multi_index.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_pandas_dataframe.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_query.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_query_condition.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_schema_evolution.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_serialization.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_stats.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_subarray.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_util.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_vfs.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests copying tiledb/tests/test_webp.py -> build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/tests running build_ext ext_modules: [, , ] tiledb_ext: main_ext: tiledb_cc_ext: tiledb_ext.library_dirs: ['/usr/local/lib'] libtiledb_exists checking 'library_dirs': ['/usr/local/lib'] libtiledb_exists found: '/usr/local/lib/libtiledb.so' prefix_dir: /usr/local do_install: False cythoning tiledb/libtiledb.pyx to tiledb/libtiledb.cpp /usr/local/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /construction/databases/py-tiledb/tiledb-0.21.5/tiledb/libtiledb.pxd tree = Parsing.p_module(s, pxd, full_module_name) building 'tiledb.libtiledb' extension creating build/temp.dragonfly-6.5-x86_64-cpython-39 creating build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/libtiledb.cpp -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/libtiledb.o -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations In file included from /usr/local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1940, from /usr/local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, from tiledb/libtiledb.cpp:773: /usr/local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ c++ -shared -L/usr/local/lib -Wl,-rpath=/usr/local/lib -L/usr/local/lib -Wl,-rpath,/usr/local/lib -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/libtiledb.o -L/usr/local/lib -L/usr/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -ltiledb -o build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/libtiledb.cpython-39.so building 'tiledb.main' extension creating build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/tests cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/core.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/core.o -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/fragment.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/fragment.o -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/main.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/main.o -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/npbuffer.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/npbuffer.o -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/schema_evolution.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/schema_evolution.o -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/tests/test_metadata.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/tests/test_metadata.o -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/tests/test_webp.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/tests/test_webp.o -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/util.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/util.o -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden c++ -shared -L/usr/local/lib -Wl,-rpath=/usr/local/lib -L/usr/local/lib -Wl,-rpath,/usr/local/lib -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/core.o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/fragment.o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/main.o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/npbuffer.o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/schema_evolution.o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/tests/test_metadata.o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/tests/test_webp.o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/util.o -L/usr/local/lib -L/usr/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -ltiledb -o build/lib.dragonfly-6.5-x86_64-cpython-39/tiledb/main.cpython-39.so building 'tiledb.cc' extension creating build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/array.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/array.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/attribute.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/attribute.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/common.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/common.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/context.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/context.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/dimension_label.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/dimension_label.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/domain.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/domain.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/enum.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/enum.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/filestore.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/filestore.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/filter.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/filter.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/group.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/group.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/object.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/object.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/query.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/query.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c tiledb/cc/schema.cc -o build/temp.dragonfly-6.5-x86_64-cpython-39/tiledb/cc/schema.o -fvisibility=hidden -g0 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++17 -Wno-deprecated-declarations -fvisibility=hidden In file included from /usr/include/c++/8.0/bits/move.h:55, from /usr/include/c++/8.0/bits/stl_function.h:60, from /usr/include/c++/8.0/functional:49, from /usr/local/include/tiledb/core_interface.h:39, from /usr/local/include/tiledb/exception.h:37, from /usr/local/include/tiledb/utils.h:36, from /usr/local/include/tiledb/config.h:39, from /usr/local/include/tiledb/context.h:38, from /usr/local/include/tiledb/attribute.h:38, from /usr/local/include/tiledb/array_schema.h:38, from /usr/local/include/tiledb/array.h:38, from /usr/local/include/tiledb/tiledb:49, from tiledb/cc/schema.cc:1: /usr/include/c++/8.0/type_traits: In instantiation of 'struct std::is_base_of': /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:1404:56: recursively required by substitution of 'template class pybind11::detail::type_caster::type>::value, void>::type> [with T = __FILE]' /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:1404:56: required from 'constexpr const auto pybind11::detail::argument_loader::arg_names' /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:1404:27: required from 'class pybind11::detail::argument_loader' /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:219:52: required from 'void pybind11::cpp_function::initialize(Func&&, Return (*)(Args ...), const Extra& ...) [with Func = pybind11::cpp_function::cpp_function(Return (Class::*)(Arg ...) const, const Extra& ...) [with Return = void; Class = tiledb::ArraySchema; Arg = {__FILE*}; Extra = {pybind11::name, pybind11::is_method, pybind11::sibling}]::; Return = void; Args = {const tiledb::ArraySchema*, __FILE*}; Extra = {pybind11::name, pybind11::is_method, pybind11::sibling}]' /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:131:9: required from 'pybind11::cpp_function::cpp_function(Return (Class::*)(Arg ...) const, const Extra& ...) [with Return = void; Class = tiledb::ArraySchema; Arg = {__FILE*}; Extra = {pybind11::name, pybind11::is_method, pybind11::sibling}]' /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1568:22: required from 'pybind11::class_& pybind11::class_::def(const char*, Func&&, const Extra& ...) [with Func = void (tiledb::ArraySchema::*)(__FILE*) const; Extra = {}; type_ = tiledb::ArraySchema; options = {}]' tiledb/cc/schema.cc:183:39: required from here /usr/include/c++/8.0/type_traits:1337:12: error: invalid use of incomplete type 'struct __FILE' struct is_base_of ^~~~~~~~~~ In file included from /usr/local/include/tiledb/tiledb.h:74, from /usr/local/include/tiledb/config.h:38, from /usr/local/include/tiledb/context.h:38, from /usr/local/include/tiledb/attribute.h:38, from /usr/local/include/tiledb/array_schema.h:38, from /usr/local/include/tiledb/array.h:38, from /usr/local/include/tiledb/tiledb:49, from tiledb/cc/schema.cc:1: /usr/include/stdio.h:110:16: note: forward declaration of 'struct __FILE' typedef struct __FILE FILE; ^~~~~~ In file included from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:14, from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:14, from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12, from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13, from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/numpy.h:12, from tiledb/cc/schema.cc:4: /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/descr.h: In instantiation of 'static constexpr std::array pybind11::detail::descr::types() [with long unsigned int N = 18; Ts = {tiledb::ArraySchema, __FILE}]': /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:292:73: required from 'void pybind11::cpp_function::initialize(Func&&, Return (*)(Args ...), const Extra& ...) [with Func = pybind11::cpp_function::cpp_function(Return (Class::*)(Arg ...) const, const Extra& ...) [with Return = void; Class = tiledb::ArraySchema; Arg = {__FILE*}; Extra = {pybind11::name, pybind11::is_method, pybind11::sibling}]::; Return = void; Args = {const tiledb::ArraySchema*, __FILE*}; Extra = {pybind11::name, pybind11::is_method, pybind11::sibling}]' /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:131:9: required from 'pybind11::cpp_function::cpp_function(Return (Class::*)(Arg ...) const, const Extra& ...) [with Return = void; Class = tiledb::ArraySchema; Arg = {__FILE*}; Extra = {pybind11::name, pybind11::is_method, pybind11::sibling}]' /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1568:22: required from 'pybind11::class_& pybind11::class_::def(const char*, Func&&, const Extra& ...) [with Func = void (tiledb::ArraySchema::*)(__FILE*) const; Extra = {}; type_ = tiledb::ArraySchema; options = {}]' tiledb/cc/schema.cc:183:39: required from here /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/descr.h:40:19: error: invalid use of incomplete type 'struct __FILE' return {{&typeid(Ts)..., nullptr}}; ^~~~~~~~~~ In file included from /usr/local/include/tiledb/tiledb.h:74, from /usr/local/include/tiledb/config.h:38, from /usr/local/include/tiledb/context.h:38, from /usr/local/include/tiledb/attribute.h:38, from /usr/local/include/tiledb/array_schema.h:38, from /usr/local/include/tiledb/array.h:38, from /usr/local/include/tiledb/tiledb:49, from tiledb/cc/schema.cc:1: /usr/include/stdio.h:110:16: note: forward declaration of 'struct __FILE' typedef struct __FILE FILE; ^~~~~~ In file included from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:14, from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:14, from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12, from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13, from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/numpy.h:12, from tiledb/cc/schema.cc:4: /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/descr.h:40:42: error: could not convert '{{, nullptr}}' from '' to 'std::array' return {{&typeid(Ts)..., nullptr}}; ^ In file included from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/numpy.h:12, from tiledb/cc/schema.cc:4: /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In instantiation of 'void pybind11::cpp_function::initialize(Func&&, Return (*)(Args ...), const Extra& ...) [with Func = pybind11::cpp_function::cpp_function(Return (Class::*)(Arg ...) const, const Extra& ...) [with Return = void; Class = tiledb::ArraySchema; Arg = {__FILE*}; Extra = {pybind11::name, pybind11::is_method, pybind11::sibling}]::; Return = void; Args = {const tiledb::ArraySchema*, __FILE*}; Extra = {pybind11::name, pybind11::is_method, pybind11::sibling}]': /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:131:9: required from 'pybind11::cpp_function::cpp_function(Return (Class::*)(Arg ...) const, const Extra& ...) [with Return = void; Class = tiledb::ArraySchema; Arg = {__FILE*}; Extra = {pybind11::name, pybind11::is_method, pybind11::sibling}]' /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1568:22: required from 'pybind11::class_& pybind11::class_::def(const char*, Func&&, const Extra& ...) [with Func = void (tiledb::ArraySchema::*)(__FILE*) const; Extra = {}; type_ = tiledb::ArraySchema; options = {}]' tiledb/cc/schema.cc:183:39: required from here /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:292:73: in 'constexpr' expansion of 'pybind11::detail::descr<18, tiledb::ArraySchema, __FILE>::types()' /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:292:39: error: 'constexpr' call flows off the end of the function PYBIND11_DESCR_CONSTEXPR auto types = decltype(signature)::types(); ^~~~~ In file included from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:14, from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12, from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13, from /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/numpy.h:12, from tiledb/cc/schema.cc:4: /usr/local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:1416:57: error: 'std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::cpp_function::cpp_function(Return (Class::*)(Arg ...) const, const Extra& ...) [with Return = void; Class = tiledb::ArraySchema; Arg = {__FILE*}; Extra = {pybind11::name, pybind11::is_method, pybind11::sibling}]::&; Args = {const tiledb::ArraySchema*, __FILE*}; std::enable_if_t::value, pybind11::detail::void_type> = pybind11::detail::void_type]', declared using local type 'pybind11::cpp_function::cpp_function(Return (Class::*)(Arg ...) const, const Extra& ...) [with Return = void; Class = tiledb::ArraySchema; Arg = {__FILE*}; Extra = {pybind11::name, pybind11::is_method, pybind11::sibling}]::', is used but never defined [-fpermissive] enable_if_t::value, void_type> call(Func &&f) && { ^~~~ error: command '/usr/local/libexec/ccache/cc' failed with exit code 1 ERROR Backend subprocess exited when trying to invoke build_wheel *** Error code 1 Stop. make[1]: stopped in /xports/databases/py-tiledb *** Error code 1 Stop. make: stopped in /xports/databases/py-tiledb FAILED 00:01:00