------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/ncurses-6.1.20190525.txz Installing /packages/All/indexinfo-0.3.1.txz Installing /packages/All/readline-8.0.4.txz Installing /packages/All/sqlite3-3.31.1_1,1.txz Installing /packages/All/libffi-3.2.1_3.txz Installing /packages/All/expat-2.2.8.txz Installing /packages/All/gettext-runtime-0.20.2.txz Installing /packages/All/openssl-1.1.1g,1.txz Installing /packages/All/python37-3.7.7.txz ===== Message from python37-3.7.7: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py37-gdbm databases/py-gdbm@py37 py37-sqlite3 databases/py-sqlite3@py37 py37-tkinter x11-toolkits/py-tkinter@py37 Installing /packages/All/py37-setuptools-44.0.0.txz Installing /packages/All/py37-sqlite3-3.7.7_7.txz SUCCEEDED 00:00:05 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> py37-ruffus-2.8.3 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> py37-ruffus-2.8.3 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py37-ruffus-2.8.3 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> py37-ruffus-2.8.3 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py37-ruffus-2.8.3 for building => SHA256 Checksum OK for ruffus-2.8.3.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> py37-ruffus-2.8.3 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py37-ruffus-2.8.3 for building ===> Extracting for py37-ruffus-2.8.3 => SHA256 Checksum OK for ruffus-2.8.3.tar.gz. Extracted Memory Use: 15.40M SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for py37-ruffus-2.8.3 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> py37-ruffus-2.8.3 depends on package: py37-sqlite3>0 - found ===> py37-ruffus-2.8.3 depends on package: py37-setuptools>0 - found ===> py37-ruffus-2.8.3 depends on file: /usr/local/bin/python3.7 - found ===> py37-ruffus-2.8.3 depends on package: py37-setuptools>0 - found ===> py37-ruffus-2.8.3 depends on file: /usr/local/bin/python3.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> py37-ruffus-2.8.3 depends on package: py37-sqlite3>0 - found ===> py37-ruffus-2.8.3 depends on package: py37-setuptools>0 - found ===> py37-ruffus-2.8.3 depends on file: /usr/local/bin/python3.7 - found ===> py37-ruffus-2.8.3 depends on package: py37-setuptools>0 - found ===> py37-ruffus-2.8.3 depends on file: /usr/local/bin/python3.7 - found ===> Configuring for py37-ruffus-2.8.3 running config SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for py37-ruffus-2.8.3 running build running build_py creating build creating build/lib creating build/lib/ruffus copying ruffus/graph.py -> build/lib/ruffus copying ruffus/dbdict.py -> build/lib/ruffus copying ruffus/combinatorics.py -> build/lib/ruffus copying ruffus/cmdline.py -> build/lib/ruffus copying ruffus/__init__.py -> build/lib/ruffus copying ruffus/ruffus_version.py -> build/lib/ruffus copying ruffus/proxy_logger.py -> build/lib/ruffus copying ruffus/task.py -> build/lib/ruffus copying ruffus/ruffus_utility.py -> build/lib/ruffus copying ruffus/drmaa_wrapper.py -> build/lib/ruffus copying ruffus/adjacent_pairs_iterate.py -> build/lib/ruffus copying ruffus/print_dependencies.py -> build/lib/ruffus copying ruffus/ruffus_exceptions.py -> build/lib/ruffus copying ruffus/file_name_parameters.py -> build/lib/ruffus copying ruffus/parse_old_style_ruffus.py -> build/lib/ruffus running egg_info writing ruffus.egg-info/PKG-INFO writing dependency_links to ruffus.egg-info/dependency_links.txt writing top-level names to ruffus.egg-info/top_level.txt reading manifest file 'ruffus.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'ruffus.egg-info/SOURCES.txt' creating build/lib/ruffus/test copying ruffus/test/check_subpipeline_cmdline.py -> build/lib/ruffus/test copying ruffus/test/complicated_example.py -> build/lib/ruffus/test copying ruffus/test/create_test_script_from_dependency_tree.py -> build/lib/ruffus/test copying ruffus/test/draw_specified_dependency_tree.py -> build/lib/ruffus/test copying ruffus/test/five_second.py -> build/lib/ruffus/test copying ruffus/test/manual_test_ctrl_c_exceptions.py -> build/lib/ruffus/test copying ruffus/test/manual_test_ctrl_c_exceptions_drmaa.py -> build/lib/ruffus/test copying ruffus/test/manual_test_drmaa.py -> build/lib/ruffus/test copying ruffus/test/play_with_colours.py -> build/lib/ruffus/test copying ruffus/test/qrsh_workaround.py -> build/lib/ruffus/test copying ruffus/test/run_all_unit_tests.cmd -> build/lib/ruffus/test copying ruffus/test/run_all_unit_tests3.cmd -> build/lib/ruffus/test copying ruffus/test/simpler_with_shared_logging.py -> build/lib/ruffus/test copying ruffus/test/slow_process_for_testing.py -> build/lib/ruffus/test copying ruffus/test/test_N_x_M_and_collate.py -> build/lib/ruffus/test copying ruffus/test/test_active_if.py -> build/lib/ruffus/test copying ruffus/test/test_branching_dependencies.py -> build/lib/ruffus/test copying ruffus/test/test_check_if_uptodate.py -> build/lib/ruffus/test copying ruffus/test/test_cmdline.py -> build/lib/ruffus/test copying ruffus/test/test_collate.py -> build/lib/ruffus/test copying ruffus/test/test_combinatorics.py -> build/lib/ruffus/test copying ruffus/test/test_drmaa_wrapper_run_job_locally.py -> build/lib/ruffus/test copying ruffus/test/test_empty_files_decorator.py -> build/lib/ruffus/test copying ruffus/test/test_exceptions.py -> build/lib/ruffus/test copying ruffus/test/test_file_name_parameters.py -> build/lib/ruffus/test copying ruffus/test/test_files_decorator.py -> build/lib/ruffus/test copying ruffus/test/test_filesre_combine.py -> build/lib/ruffus/test copying ruffus/test/test_filesre_split_and_combine.py -> build/lib/ruffus/test copying ruffus/test/test_follows_mkdir.py -> build/lib/ruffus/test copying ruffus/test/test_graphviz.py -> build/lib/ruffus/test copying ruffus/test/test_inputs_with_multiple_args_raising_exception.py -> build/lib/ruffus/test copying ruffus/test/test_job_completion_checksums.py -> build/lib/ruffus/test copying ruffus/test/test_job_history_with_exceptions.py -> build/lib/ruffus/test copying ruffus/test/test_mkdir.py -> build/lib/ruffus/test copying ruffus/test/test_newstyle_combinatorics.py -> build/lib/ruffus/test copying ruffus/test/test_newstyle_proxy.py -> build/lib/ruffus/test copying ruffus/test/test_newstyle_regex_error_messages.py -> build/lib/ruffus/test copying ruffus/test/test_pausing.py -> build/lib/ruffus/test copying ruffus/test/test_pipeline_printout_graph.py -> build/lib/ruffus/test copying ruffus/test/test_pool_manager.py -> build/lib/ruffus/test copying ruffus/test/test_posttask_merge.py -> build/lib/ruffus/test copying ruffus/test/test_proxy_logger.py -> build/lib/ruffus/test copying ruffus/test/test_regex_error_messages.py -> build/lib/ruffus/test copying ruffus/test/test_ruffus_utility.py -> build/lib/ruffus/test copying ruffus/test/test_ruffus_utility_parse_task_arguments.py -> build/lib/ruffus/test copying ruffus/test/test_runtime_data.py -> build/lib/ruffus/test copying ruffus/test/test_softlink_uptodate.py -> build/lib/ruffus/test copying ruffus/test/test_split_and_combine.py -> build/lib/ruffus/test copying ruffus/test/test_split_regex_and_collate.py -> build/lib/ruffus/test copying ruffus/test/test_split_subdivide_checkpointing.py -> build/lib/ruffus/test copying ruffus/test/test_subpipeline.py -> build/lib/ruffus/test copying ruffus/test/test_suffix_output_dir.py -> build/lib/ruffus/test copying ruffus/test/test_task_file_dependencies.py -> build/lib/ruffus/test copying ruffus/test/test_task_misc.py -> build/lib/ruffus/test copying ruffus/test/test_transform_add_inputs.py -> build/lib/ruffus/test copying ruffus/test/test_transform_formatter.py -> build/lib/ruffus/test copying ruffus/test/test_transform_inputs.py -> build/lib/ruffus/test copying ruffus/test/test_transform_with_no_re_matches.py -> build/lib/ruffus/test copying ruffus/test/test_tutorial7.py -> build/lib/ruffus/test copying ruffus/test/test_unicode_filenames.py -> build/lib/ruffus/test copying ruffus/test/test_verbosity.py -> build/lib/ruffus/test copying ruffus/test/test_with_logger.py -> build/lib/ruffus/test SUCCEEDED 00:00:02 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> py37-ruffus-2.8.3 depends on package: py37-sqlite3>0 - found ===> py37-ruffus-2.8.3 depends on package: py37-setuptools>0 - found ===> py37-ruffus-2.8.3 depends on file: /usr/local/bin/python3.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for py37-ruffus-2.8.3 ===> py37-ruffus-2.8.3 depends on package: py37-sqlite3>0 - found ===> py37-ruffus-2.8.3 depends on package: py37-setuptools>0 - found ===> py37-ruffus-2.8.3 depends on file: /usr/local/bin/python3.7 - found ===> Generating temporary packing list running install running build running build_py running egg_info writing ruffus.egg-info/PKG-INFO writing dependency_links to ruffus.egg-info/dependency_links.txt writing top-level names to ruffus.egg-info/top_level.txt reading manifest file 'ruffus.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'ruffus.egg-info/SOURCES.txt' running install_lib creating /construction/science/py-ruffus/stage/usr/local/lib/python3.7 creating /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages creating /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/__init__.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/ruffus_exceptions.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/task.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/drmaa_wrapper.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/ruffus_version.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/file_name_parameters.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/graph.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/combinatorics.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus creating /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_job_completion_checksums.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_split_and_combine.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_inputs_with_multiple_args_raising_exception.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/manual_test_ctrl_c_exceptions_drmaa.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_job_history_with_exceptions.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_suffix_output_dir.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_proxy_logger.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_graphviz.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_transform_with_no_re_matches.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_newstyle_proxy.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/draw_specified_dependency_tree.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_unicode_filenames.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_transform_inputs.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/complicated_example.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_filesre_split_and_combine.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_split_regex_and_collate.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_mkdir.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_combinatorics.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_softlink_uptodate.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_verbosity.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_newstyle_regex_error_messages.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_exceptions.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_follows_mkdir.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/play_with_colours.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_files_decorator.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_active_if.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_runtime_data.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_transform_add_inputs.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_split_subdivide_checkpointing.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_branching_dependencies.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/run_all_unit_tests.cmd -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_empty_files_decorator.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/qrsh_workaround.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_ruffus_utility_parse_task_arguments.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/run_all_unit_tests3.cmd -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_ruffus_utility.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_with_logger.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_task_file_dependencies.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_transform_formatter.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_file_name_parameters.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/simpler_with_shared_logging.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_drmaa_wrapper_run_job_locally.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_posttask_merge.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_regex_error_messages.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/check_subpipeline_cmdline.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/manual_test_ctrl_c_exceptions.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_N_x_M_and_collate.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_filesre_combine.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_cmdline.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_tutorial7.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_task_misc.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_pipeline_printout_graph.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/five_second.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_collate.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_pool_manager.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/slow_process_for_testing.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_subpipeline.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_newstyle_combinatorics.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/create_test_script_from_dependency_tree.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_check_if_uptodate.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/manual_test_drmaa.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/test/test_pausing.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test copying build/lib/ruffus/parse_old_style_ruffus.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/print_dependencies.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/ruffus_utility.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/proxy_logger.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/cmdline.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/dbdict.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus copying build/lib/ruffus/adjacent_pairs_iterate.py -> /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/ruffus_exceptions.py to ruffus_exceptions.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/task.py to task.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/drmaa_wrapper.py to drmaa_wrapper.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/ruffus_version.py to ruffus_version.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/file_name_parameters.py to file_name_parameters.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/graph.py to graph.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/combinatorics.py to combinatorics.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_job_completion_checksums.py to test_job_completion_checksums.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_split_and_combine.py to test_split_and_combine.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_inputs_with_multiple_args_raising_exception.py to test_inputs_with_multiple_args_raising_exception.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/manual_test_ctrl_c_exceptions_drmaa.py to manual_test_ctrl_c_exceptions_drmaa.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_job_history_with_exceptions.py to test_job_history_with_exceptions.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_suffix_output_dir.py to test_suffix_output_dir.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_proxy_logger.py to test_proxy_logger.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_graphviz.py to test_graphviz.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_transform_with_no_re_matches.py to test_transform_with_no_re_matches.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_newstyle_proxy.py to test_newstyle_proxy.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/draw_specified_dependency_tree.py to draw_specified_dependency_tree.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_unicode_filenames.py to test_unicode_filenames.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_transform_inputs.py to test_transform_inputs.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/complicated_example.py to complicated_example.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_filesre_split_and_combine.py to test_filesre_split_and_combine.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_split_regex_and_collate.py to test_split_regex_and_collate.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_mkdir.py to test_mkdir.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_combinatorics.py to test_combinatorics.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_softlink_uptodate.py to test_softlink_uptodate.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_verbosity.py to test_verbosity.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_newstyle_regex_error_messages.py to test_newstyle_regex_error_messages.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_exceptions.py to test_exceptions.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_follows_mkdir.py to test_follows_mkdir.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/play_with_colours.py to play_with_colours.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_files_decorator.py to test_files_decorator.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_active_if.py to test_active_if.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_runtime_data.py to test_runtime_data.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_transform_add_inputs.py to test_transform_add_inputs.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_split_subdivide_checkpointing.py to test_split_subdivide_checkpointing.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_branching_dependencies.py to test_branching_dependencies.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_empty_files_decorator.py to test_empty_files_decorator.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/qrsh_workaround.py to qrsh_workaround.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_ruffus_utility_parse_task_arguments.py to test_ruffus_utility_parse_task_arguments.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_ruffus_utility.py to test_ruffus_utility.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_with_logger.py to test_with_logger.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_task_file_dependencies.py to test_task_file_dependencies.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_transform_formatter.py to test_transform_formatter.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_file_name_parameters.py to test_file_name_parameters.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/simpler_with_shared_logging.py to simpler_with_shared_logging.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_drmaa_wrapper_run_job_locally.py to test_drmaa_wrapper_run_job_locally.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_posttask_merge.py to test_posttask_merge.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_regex_error_messages.py to test_regex_error_messages.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/check_subpipeline_cmdline.py to check_subpipeline_cmdline.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/manual_test_ctrl_c_exceptions.py to manual_test_ctrl_c_exceptions.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_N_x_M_and_collate.py to test_N_x_M_and_collate.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_filesre_combine.py to test_filesre_combine.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_cmdline.py to test_cmdline.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_tutorial7.py to test_tutorial7.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_task_misc.py to test_task_misc.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_pipeline_printout_graph.py to test_pipeline_printout_graph.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/five_second.py to five_second.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_collate.py to test_collate.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_pool_manager.py to test_pool_manager.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/slow_process_for_testing.py to slow_process_for_testing.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_subpipeline.py to test_subpipeline.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_newstyle_combinatorics.py to test_newstyle_combinatorics.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/create_test_script_from_dependency_tree.py to create_test_script_from_dependency_tree.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_check_if_uptodate.py to test_check_if_uptodate.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/manual_test_drmaa.py to manual_test_drmaa.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/test/test_pausing.py to test_pausing.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/parse_old_style_ruffus.py to parse_old_style_ruffus.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/print_dependencies.py to print_dependencies.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/ruffus_utility.py to ruffus_utility.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/proxy_logger.py to proxy_logger.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/cmdline.py to cmdline.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/dbdict.py to dbdict.cpython-37.pyc byte-compiling /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus/adjacent_pairs_iterate.py to adjacent_pairs_iterate.cpython-37.pyc writing byte-compilation script '/tmp/tmp4jl8hxx5.py' /usr/local/bin/python3.7 /tmp/tmp4jl8hxx5.py removing /tmp/tmp4jl8hxx5.py running install_egg_info Copying ruffus.egg-info to /construction/science/py-ruffus/stage/usr/local/lib/python3.7/site-packages/ruffus-2.8.3-py3.7.egg-info running install_scripts writing list of installed files to '/construction/science/py-ruffus/.PLIST.pymodtmp' ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:03 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for py37-ruffus-2.8.3 file sizes/checksums [231]: 0% file sizes/checksums [231]: 43% file sizes/checksums [231]: 86% file sizes/checksums [231]: 100% packing files [231]: 0% packing files [231]: 43% packing files [231]: 86% packing files [231]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:02 TOTAL TIME 00:00:15