------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/indexinfo-0.3.1.txz Installing /packages/All/gettext-runtime-0.20.2.txz Installing /packages/All/gmake-4.3.txz Installing /packages/All/gmp-6.2.0.txz Installing /packages/All/mpfr-4.0.2.txz Installing /packages/All/mpc-1.1.0_2.txz UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/binutils-2.33.1_2,1.txz Installing /packages/All/gcc8-8.4.0.txz ===== Message from gcc8-8.4.0: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/m4-1.4.18_1,1.txz Installing /packages/All/autoconf-wrapper-20131203.txz Installing /packages/All/perl5-5.30.2.txz ===== Message from perl5-5.30.2: -- The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. Installing /packages/All/autoconf-2.69_3.txz Installing /packages/All/automake-1.16.2.txz Installing /packages/All/openblas-0.3.9_2,1.txz Installing /packages/All/ncurses-6.1.20190525.txz Installing /packages/All/bash-5.0.17.txz UNFLAVORED devel/binutils -> use devel/binutils@native UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:00:18 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> multiwfn-3.4.1.0.14_5 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> multiwfn-3.4.1.0.14_5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by multiwfn-3.4.1.0.14_5 for building SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> multiwfn-3.4.1.0.14_5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by multiwfn-3.4.1.0.14_5 for building => SHA256 Checksum OK for stecue-gMultiwfn-v3.4.1-0-14-ge873677_GH0.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> multiwfn-3.4.1.0.14_5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by multiwfn-3.4.1.0.14_5 for building ===> Extracting for multiwfn-3.4.1.0.14_5 ===> multiwfn-3.4.1.0.14_5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by multiwfn-3.4.1.0.14_5 for building => SHA256 Checksum OK for stecue-gMultiwfn-v3.4.1-0-14-ge873677_GH0.tar.gz. Extracted Memory Use: 44.44M SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for multiwfn-3.4.1.0.14_5 ===> Applying ports patches for multiwfn-3.4.1.0.14_5 ===> Cleanly applied ports patch(es) patch-init_Multiwfn.02 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> multiwfn-3.4.1.0.14_5 depends on package: gmake>=4.3 - found ===> multiwfn-3.4.1.0.14_5 depends on executable: gfortran8 - found ===> multiwfn-3.4.1.0.14_5 depends on file: /usr/local/bin/as - found ===> multiwfn-3.4.1.0.14_5 depends on package: autoconf>=2.69 - found ===> multiwfn-3.4.1.0.14_5 depends on package: automake>=1.16.1 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- ===> multiwfn-3.4.1.0.14_5 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> multiwfn-3.4.1.0.14_5 depends on package: gmake>=4.3 - found ===> multiwfn-3.4.1.0.14_5 depends on executable: gfortran8 - found ===> multiwfn-3.4.1.0.14_5 depends on file: /usr/local/bin/as - found ===> multiwfn-3.4.1.0.14_5 depends on package: autoconf>=2.69 - found ===> multiwfn-3.4.1.0.14_5 depends on package: automake>=1.16.1 - found ===> multiwfn-3.4.1.0.14_5 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so) ===> Configuring for multiwfn-3.4.1.0.14_5 configure.ac:14: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.ac:14: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.ac:14: installing 'config/install-sh' configure.ac:14: installing 'config/missing' configure: loading site script /xports/Templates/config.site checking whether the Fortran 77 compiler works... yes checking for Fortran 77 compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran8 accepts -g... yes checking whether we are using the GNU Fortran compiler... yes checking whether gfortran8 accepts -g... yes checking for Fortran flag to compile .F files... none checking for Fortran flag to compile .f90 files... none checking build system type... x86_64-portbld-dragonfly5.9 checking host system type... x86_64-portbld-dragonfly5.9 checking how to get verbose linking output from gfortran8... -v checking for Fortran 77 libraries of gfortran8... -L/usr/local/lib/gcc8 -L/usr/local/lib -L/usr/local/bin -L/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0 -L/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../../../x86_64-portbld-dragonfly5.9/lib -L/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../.. -lgfortran -lm -lquadmath checking for gcc... cc checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking whether cc understands -c and -o together... yes checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... yes checking for cheev_... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) /usr/bin/awk checking whether gmake sets $(MAKE)... yes checking whether gmake supports the include directive... yes (GNU style) checking whether gmake supports nested variables... yes checking dependency style of cc... none checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: executing depfiles commands SUCCEEDED 00:00:09 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for multiwfn-3.4.1.0.14_5 gmake[2]: Entering directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677' Making all in src gmake[3]: Entering directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677/src' gfortran8 -DPACKAGE_NAME=\"gMultiwfn\" -DPACKAGE_TARNAME=\"gmultiwfn\" -DPACKAGE_VERSION=\"3.4.99.20180110\" -DPACKAGE_STRING=\"gMultiwfn\ 3.4.99.20180110\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_BLAS=1 -DHAVE_LAPACK=1 -DPACKAGE=\"gMultiwfn\" -DVERSION=\"3.4.99.20180110\" -I. -isystem /usr/local/include -O3 -std=legacy -fopenmp -O -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-Lebedev-Laikov.o `test -f 'Lebedev-Laikov.F' || echo './'`Lebedev-Laikov.F gfortran8 -DPACKAGE_NAME=\"gMultiwfn\" -DPACKAGE_TARNAME=\"gmultiwfn\" -DPACKAGE_VERSION=\"3.4.99.20180110\" -DPACKAGE_STRING=\"gMultiwfn\ 3.4.99.20180110\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_BLAS=1 -DHAVE_LAPACK=1 -DPACKAGE=\"gMultiwfn\" -DVERSION=\"3.4.99.20180110\" -I. -isystem /usr/local/include -O3 -std=legacy -fopenmp -O -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-DFTxclib.o `test -f 'DFTxclib.F' || echo './'`DFTxclib.F gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-edflib.o `test -f 'edflib.f90' || echo './'`edflib.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-define.o `test -f 'define.f90' || echo './'`define.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-atmraddens.o `test -f 'atmraddens.f90' || echo './'`atmraddens.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-util.o `test -f 'util.f90' || echo './'`util.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-function.o `test -f 'function.f90' || echo './'`function.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-fileIO.o `test -f 'fileIO.f90' || echo './'`fileIO.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-spectrum.o `test -f 'spectrum.f90' || echo './'`spectrum.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-bondana.o `test -f 'bondana.f90' || echo './'`bondana.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-procgriddata.o `test -f 'procgriddata.f90' || echo './'`procgriddata.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-AdNDP.o `test -f 'AdNDP.f90' || echo './'`AdNDP.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-CDA.o `test -f 'CDA.f90' || echo './'`CDA.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-sub.o `test -f 'sub.f90' || echo './'`sub.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-DOS.o `test -f 'DOS.f90' || echo './'`DOS.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-wfn.o `test -f 'wfn.f90' || echo './'`wfn.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-population.o `test -f 'population.f90' || echo './'`population.f90 population.f90:310:143: if (wfntype==1.or.wfntype==2.or.wfntype==4) write(10,"(a4,4f12.6)") a(i)%name,a(i)%x*b2a,a(i)%y*b2a,a(i)%z*b2a,a(i)%charge-atmelea(i)--atmeleb(i) 1 Warning: Extension: Unary operator following arithmetic operator (use parentheses) at (1) gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-compana.o `test -f 'compana.f90' || echo './'`compana.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-topology.o `test -f 'topology.f90' || echo './'`topology.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-excittransana.o `test -f 'excittransana.f90' || echo './'`excittransana.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-otherfunc.o `test -f 'otherfunc.f90' || echo './'`otherfunc.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-otherfunc2.o `test -f 'otherfunc2.f90' || echo './'`otherfunc2.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-surfana.o `test -f 'surfana.f90' || echo './'`surfana.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-LSB.o `test -f 'LSB.f90' || echo './'`LSB.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-basinana.o `test -f 'basinana.f90' || echo './'`basinana.f90 gfortran8 -O3 -ffree-line-length-0 -std=legacy -fopenmp -Wl,-rpath=/usr/local/lib/gcc8 -c -o Multiwfn-fuzzyana.o `test -f 'fuzzyana.f90' || echo './'`fuzzyana.f90 gfortran8 -O3 -std=legacy -fopenmp -O -Wl,-rpath=/usr/local/lib/gcc8 -Wl,-rpath=/usr/local/lib/gcc8 -L/usr/local/lib/gcc8 -B/usr/local/bin -o Multiwfn Multiwfn-Lebedev-Laikov.o Multiwfn-DFTxclib.o Multiwfn-edflib.o Multiwfn-define.o Multiwfn-util.o Multiwfn-function.o Multiwfn-sub.o Multiwfn-fileIO.o Multiwfn-spectrum.o Multiwfn-DOS.o Multiwfn-wfn.o Multiwfn-population.o Multiwfn-compana.o Multiwfn-bondana.o Multiwfn-topology.o Multiwfn-excittransana.o Multiwfn-otherfunc.o Multiwfn-otherfunc2.o Multiwfn-surfana.o Multiwfn-procgriddata.o Multiwfn-AdNDP.o Multiwfn-fuzzyana.o Multiwfn-CDA.o Multiwfn-basinana.o Multiwfn-atmraddens.o Multiwfn-LSB.o -lopenblas -L/usr/local/lib -L/usr/local/lib/gcc8 -L/usr/local/lib -L/usr/local/bin -L/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0 -L/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../../../x86_64-portbld-dragonfly5.9/lib -L/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../.. -lgfortran -lm -lquadmath -L/usr/local/lib /usr/local/bin/ld: /usr/lib/libc.so: .dynsym local symbol at index 8 (>= sh_info of 6) gmake[3]: Leaving directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677/src' gmake[3]: Entering directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677' cp ./init/settings.ini ./ cp ./init/Multiwfn.01 ./ cp ./init/Multiwfn.02 ./ ( sed -e 's,[@]pkglibdir[@],/usr/local/lib/gMultiwfn,g' ) < Multiwfn.01 > Multiwfn cat settings.ini >> Multiwfn cat Multiwfn.02 >> Multiwfn chmod +x Multiwfn gmake[3]: Leaving directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677' gmake[2]: Leaving directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677' SUCCEEDED 00:01:15 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> multiwfn-3.4.1.0.14_5 depends on executable: bash - found ===> multiwfn-3.4.1.0.14_5 depends on executable: gfortran8 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for multiwfn-3.4.1.0.14_5 ===> multiwfn-3.4.1.0.14_5 depends on executable: bash - found ===> multiwfn-3.4.1.0.14_5 depends on executable: gfortran8 - found ===> Generating temporary packing list gmake[2]: Entering directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677' Making install in src gmake[3]: Entering directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677/src' gmake[4]: Entering directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677/src' gmake[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/construction/science/multiwfn/stage/usr/local/lib/gMultiwfn' install -s -m 555 Multiwfn '/construction/science/multiwfn/stage/usr/local/lib/gMultiwfn' gmake[4]: Leaving directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677/src' gmake[3]: Leaving directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677/src' gmake[3]: Entering directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677' gmake[4]: Entering directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677' /bin/mkdir -p '/construction/science/multiwfn/stage/usr/local/bin' install -m 555 Multiwfn '/construction/science/multiwfn/stage/usr/local/bin' gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677' gmake[3]: Leaving directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677' gmake[2]: Leaving directory '/construction/science/multiwfn/gMultiwfn-3.4.1-0-14-ge873677' ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for multiwfn-3.4.1.0.14_5 file sizes/checksums [2]: 0% file sizes/checksums [2]: 100% packing files [2]: 0% packing files [2]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:04 TOTAL TIME 00:01:49