------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/metis-5.1.0_8.txz Installing /packages/All/tbb-2020.2.txz Installing /packages/All/indexinfo-0.3.1.txz Installing /packages/All/gmp-6.2.0.txz Installing /packages/All/mpfr-4.0.2.txz Installing /packages/All/mpc-1.1.0_2.txz UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/gettext-runtime-0.20.2.txz Installing /packages/All/binutils-2.33.1_2,1.txz Installing /packages/All/gcc8-8.4.0.txz ===== Message from gcc8-8.4.0: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/openblas-0.3.9_2,1.txz Installing /packages/All/suitesparse-5.7.2_1.txz Installing /packages/All/libffi-3.2.1_3.txz Installing /packages/All/expat-2.2.8.txz Installing /packages/All/ncurses-6.1.20190525.txz Installing /packages/All/readline-8.0.4.txz Installing /packages/All/openssl-1.1.1g,1.txz Installing /packages/All/python37-3.7.7.txz ===== Message from python37-3.7.7: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py37-gdbm databases/py-gdbm@py37 py37-sqlite3 databases/py-sqlite3@py37 py37-tkinter x11-toolkits/py-tkinter@py37 Installing /packages/All/py37-setuptools-44.0.0.txz Installing /packages/All/py37-numpy-1.16.5_5,1.txz Installing /packages/All/py37-scipy-1.2.2_1.txz UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:00:48 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> py37-fastcluster-1.1.26 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> py37-fastcluster-1.1.26 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py37-fastcluster-1.1.26 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> py37-fastcluster-1.1.26 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py37-fastcluster-1.1.26 for building => SHA256 Checksum OK for fastcluster-1.1.26.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> py37-fastcluster-1.1.26 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py37-fastcluster-1.1.26 for building ===> Extracting for py37-fastcluster-1.1.26 => SHA256 Checksum OK for fastcluster-1.1.26.tar.gz. Extracted Memory Use: 0.37M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for py37-fastcluster-1.1.26 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> py37-fastcluster-1.1.26 depends on package: py37-numpy>=1.16,1<1.19,1 - found ===> py37-fastcluster-1.1.26 depends on package: py37-setuptools>0 - found ===> py37-fastcluster-1.1.26 depends on file: /usr/local/bin/python3.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> py37-fastcluster-1.1.26 depends on package: py37-numpy>=1.16,1<1.19,1 - found ===> py37-fastcluster-1.1.26 depends on package: py37-setuptools>0 - found ===> py37-fastcluster-1.1.26 depends on file: /usr/local/bin/python3.7 - found ===> Configuring for py37-fastcluster-1.1.26 Version: 1.1.26 running config SUCCEEDED 00:00:03 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for py37-fastcluster-1.1.26 Version: 1.1.26 running build running build_py creating build creating build/lib.dragonfly-5.9-x86_64-3.7 copying fastcluster.py -> build/lib.dragonfly-5.9-x86_64-3.7 running build_ext building '_fastcluster' extension creating build/temp.dragonfly-5.9-x86_64-3.7 creating build/temp.dragonfly-5.9-x86_64-3.7/src cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/lib/python3.7/site-packages/numpy/core/include -I/usr/local/include/python3.7m -c src/fastcluster_python.cpp -o build/temp.dragonfly-5.9-x86_64-3.7/src/fastcluster_python.o In file included from src/fastcluster_python.cpp:62: src/fastcluster.cpp:53:118: note: #pragma message: Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored. #pragma message("Use fenv header. If there is a warning about unknown #pragma STDC FENV_ACCESS, this can be ignored.") ^ c++ -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-3.7/src/fastcluster_python.o -L/usr/local/lib -lpython3.7m -o build/lib.dragonfly-5.9-x86_64-3.7/_fastcluster.so SUCCEEDED 00:00:11 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> py37-fastcluster-1.1.26 depends on package: py37-numpy>=1.16,1<1.19,1 - found ===> py37-fastcluster-1.1.26 depends on package: py37-scipy>=0 - found ===> py37-fastcluster-1.1.26 depends on package: py37-setuptools>0 - found ===> py37-fastcluster-1.1.26 depends on file: /usr/local/bin/python3.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for py37-fastcluster-1.1.26 ===> py37-fastcluster-1.1.26 depends on package: py37-numpy>=1.16,1<1.19,1 - found ===> py37-fastcluster-1.1.26 depends on package: py37-scipy>=0 - found ===> py37-fastcluster-1.1.26 depends on package: py37-setuptools>0 - found ===> py37-fastcluster-1.1.26 depends on file: /usr/local/bin/python3.7 - found ===> Generating temporary packing list Version: 1.1.26 running install running build running build_py running build_ext running install_lib creating /construction/math/py-fastcluster/stage/usr/local/lib/python3.7 creating /construction/math/py-fastcluster/stage/usr/local/lib/python3.7/site-packages copying build/lib.dragonfly-5.9-x86_64-3.7/_fastcluster.so -> /construction/math/py-fastcluster/stage/usr/local/lib/python3.7/site-packages copying build/lib.dragonfly-5.9-x86_64-3.7/fastcluster.py -> /construction/math/py-fastcluster/stage/usr/local/lib/python3.7/site-packages byte-compiling /construction/math/py-fastcluster/stage/usr/local/lib/python3.7/site-packages/fastcluster.py to fastcluster.cpython-37.pyc writing byte-compilation script '/tmp/tmpnn7ptiij.py' /usr/local/bin/python3.7 /tmp/tmpnn7ptiij.py removing /tmp/tmpnn7ptiij.py running install_egg_info running egg_info writing fastcluster.egg-info/PKG-INFO writing dependency_links to fastcluster.egg-info/dependency_links.txt writing requirements to fastcluster.egg-info/requires.txt writing top-level names to fastcluster.egg-info/top_level.txt reading manifest file 'fastcluster.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'fastcluster.egg-info/SOURCES.txt' Copying fastcluster.egg-info to /construction/math/py-fastcluster/stage/usr/local/lib/python3.7/site-packages/fastcluster-1.1.26-py3.7.egg-info running install_scripts writing list of installed files to '/construction/math/py-fastcluster/.PLIST.pymodtmp' /usr/bin/strip /construction/math/py-fastcluster/stage/usr/local/lib/python3.7/site-packages/_fastcluster.so cd /construction/math/py-fastcluster/fastcluster-1.1.26/ && install -m 0644 CITATION.txt INSTALL.txt NEWS.txt README.txt /construction/math/py-fastcluster/stage/usr/local/share/doc/py37-fastcluster ===> Creating unique files: Move MAN files needing SUFFIX ===> Creating unique files: Move files needing SUFFIX ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Error: /usr/local/lib/python3.7/site-packages/_fastcluster.so is linked to /usr/local/lib/libintl.so.8 from devel/gettext-runtime but it is not declared as a dependency Warning: you need USES+=gettext-runtime Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:04 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for py37-fastcluster-1.1.26 file sizes/checksums [13]: 0% file sizes/checksums [13]: 100% packing files [13]: 0% packing files [13]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:00 TOTAL TIME 00:01:07