------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/perl5-5.30.2.txz ===== Message from perl5-5.30.2: -- The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. Installing /packages/All/p5-File-NFSLock-1.29.txz Installing /packages/All/p5-Heap-0.80_1.txz Installing /packages/All/p5-IO-String-1.08_1.txz Installing /packages/All/p5-TimeDate-2.30_2,1.txz Installing /packages/All/p5-Cache-2.11.txz Installing /packages/All/p5-Digest-SHA1-2.13_1.txz Installing /packages/All/p5-Error-0.17029.txz Installing /packages/All/p5-IPC-ShareLite-0.17_1.txz Installing /packages/All/p5-Cache-Cache-1.08.txz SUCCEEDED 00:00:06 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> p5-AcePerl-1.92_5 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> p5-AcePerl-1.92_5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by p5-AcePerl-1.92_5 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> p5-AcePerl-1.92_5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by p5-AcePerl-1.92_5 for building => SHA256 Checksum OK for AcePerl-1.92.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> p5-AcePerl-1.92_5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by p5-AcePerl-1.92_5 for building ===> Extracting for p5-AcePerl-1.92_5 ===> p5-AcePerl-1.92_5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by p5-AcePerl-1.92_5 for building => SHA256 Checksum OK for AcePerl-1.92.tar.gz. Extracted Memory Use: 1.50M SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for p5-AcePerl-1.92_5 ===> Applying ports patches for p5-AcePerl-1.92_5 ===> Cleanly applied ports patch(es) patch-Makefile.PL patch-RPC__RPC.xs patch-acelib_memsubs.c patch-acelib_wh_mydirent.h patch-acelib_wh_mystdlib.h ===> Applying dragonfly patches for p5-AcePerl-1.92_5 ===> Cleanly applied dragonfly patch(es) patch-acelib_wh_mydirent.h patch-acelib_wh_mystdlib.h /usr/bin/sed -e 's@FREEBSD@DRAGONFLY@g' -e 's@XX__CC__XX@cc -DPIC -fPIC @g' -e "s@/usr/X11R6/@/usr/local/@g" < /xports/biology/p5-AcePerl/files/FREEBSD_DEF > /construction/biology/p5-AcePerl/AcePerl-1.92/acelib/wmake/DRAGONFLY_DEF SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> p5-AcePerl-1.92_5 depends on package: p5-Cache-Cache>=0 - found ===> p5-AcePerl-1.92_5 depends on package: perl5>=5.30.r1<5.31 - found ===> p5-AcePerl-1.92_5 depends on package: perl5>=5.30.r1<5.31 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> p5-AcePerl-1.92_5 depends on package: p5-Cache-Cache>=0 - found ===> p5-AcePerl-1.92_5 depends on package: perl5>=5.30.r1<5.31 - found ===> p5-AcePerl-1.92_5 depends on package: perl5>=5.30.r1<5.31 - found ===> Configuring for p5-AcePerl-1.92_5 Checking if your kit is complete... Looks good Writing MYMETA.yml and MYMETA.json Using DRAGONFLY definitions to build ace library. Writing MYMETA.yml and MYMETA.json Generating a Unix-style Makefile Writing Makefile for Ace Writing MYMETA.yml and MYMETA.json SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for p5-AcePerl-1.92_5 cp Ace/Sequence/FeatureList.pm blib/lib/Ace/Sequence/FeatureList.pm cp Ace/Iterator.pm blib/lib/Ace/Iterator.pm cp Ace/Object.pm blib/lib/Ace/Object.pm AutoSplitting blib/lib/Ace/Object.pm (blib/lib/auto/Ace/Object) cp Ace/Sequence/Transcript.pm blib/lib/Ace/Sequence/Transcript.pm cp GFF/Filehandle.pm blib/lib/GFF/Filehandle.pm cp Ace/SocketServer.pm blib/lib/Ace/SocketServer.pm cp Ace/Graphics/Fk.pm blib/lib/Ace/Graphics/Fk.pm cp Ace/Graphics/Glyph/arrow.pm blib/lib/Ace/Graphics/Glyph/arrow.pm cp Ace/Local.pm blib/lib/Ace/Local.pm cp Ace/Graphics/Glyph/group.pm blib/lib/Ace/Graphics/Glyph/group.pm cp Ace/Graphics/Glyph/anchored_arrow.pm blib/lib/Ace/Graphics/Glyph/anchored_arrow.pm cp Ace/Sequence/Multi.pm blib/lib/Ace/Sequence/Multi.pm cp Ace/Graphics/Glyph/line.pm blib/lib/Ace/Graphics/Glyph/line.pm cp Ace/Graphics/Glyph/segments.pm blib/lib/Ace/Graphics/Glyph/segments.pm cp Ace/Browser/TreeSubs.pm blib/lib/Ace/Browser/TreeSubs.pm cp Ace/Sequence/Homol.pm blib/lib/Ace/Sequence/Homol.pm cp Ace/Browser/SearchSubs.pm blib/lib/Ace/Browser/SearchSubs.pm cp Ace/Graphics/Glyph/dot.pm blib/lib/Ace/Graphics/Glyph/dot.pm cp Ace/Object/Wormbase.pm blib/lib/Ace/Object/Wormbase.pm cp Ace/Graphics/Track.pm blib/lib/Ace/Graphics/Track.pm cp Ace/Graphics/Glyph/span.pm blib/lib/Ace/Graphics/Glyph/span.pm cp Ace/Sequence/Gene.pm blib/lib/Ace/Sequence/Gene.pm cp Ace.pm blib/lib/Ace.pm AutoSplitting blib/lib/Ace.pm (blib/lib/auto/Ace) cp Ace/Graphics/Glyph/triangle.pm blib/lib/Ace/Graphics/Glyph/triangle.pm cp Ace/Sequence/GappedAlignment.pm blib/lib/Ace/Sequence/GappedAlignment.pm cp Ace/Graphics/Panel.pm blib/lib/Ace/Graphics/Panel.pm cp Ace/Graphics/Glyph/toomany.pm blib/lib/Ace/Graphics/Glyph/toomany.pm cp Ace/Browser/AceSubs.pm blib/lib/Ace/Browser/AceSubs.pm cp Ace/Graphics/Glyph/crossbox.pm blib/lib/Ace/Graphics/Glyph/crossbox.pm cp Ace/Graphics/Glyph.pm blib/lib/Ace/Graphics/Glyph.pm cp Ace/Sequence/Feature.pm blib/lib/Ace/Sequence/Feature.pm AutoSplitting blib/lib/Ace/Sequence/Feature.pm (blib/lib/auto/Ace/Sequence/Feature) cp Ace/Sequence.pm blib/lib/Ace/Sequence.pm AutoSplitting blib/lib/Ace/Sequence.pm (blib/lib/auto/Ace/Sequence) cp Ace/Graphics/Glyph/ex.pm blib/lib/Ace/Graphics/Glyph/ex.pm cp Ace/Browser/GeneSubs.pm blib/lib/Ace/Browser/GeneSubs.pm cp Ace/Browser/SiteDefs.pm blib/lib/Ace/Browser/SiteDefs.pm cp Ace/Graphics/Glyph/box.pm blib/lib/Ace/Graphics/Glyph/box.pm cp Ace/Model.pm blib/lib/Ace/Model.pm cp Ace/Graphics/Glyph/graded_segments.pm blib/lib/Ace/Graphics/Glyph/graded_segments.pm cp Ace/Graphics/GlyphFactory.pm blib/lib/Ace/Graphics/GlyphFactory.pm cp Ace/Graphics/Glyph/transcript.pm blib/lib/Ace/Graphics/Glyph/transcript.pm cp Ace/Graphics/Glyph/primers.pm blib/lib/Ace/Graphics/Glyph/primers.pm cp Freesubs.pm ../blib/lib/Ace/Freesubs.pm Running Mkbootstrap for Freesubs () chmod 644 "Freesubs.bs" "/usr/local/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- Freesubs.bs ../blib/arch/auto/Ace/Freesubs/Freesubs.bs 644 "/usr/local/bin/perl" "/usr/local/lib/perl5/5.30/ExtUtils/xsubpp" -noprototypes -typemap '/usr/local/lib/perl5/5.30/ExtUtils/typemap' Freesubs.xs > Freesubs.xsc mv Freesubs.xsc Freesubs.c cc -c -I./acelib/wh -DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -DUSE_THREAD_SAFE_LOCALE -fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_FORTIFY_SOURCE=2 -pipe -O2 -fno-strict-aliasing -DVERSION=\"1.00\" -DXS_VERSION=\"1.00\" -DPIC -fPIC "-I/usr/local/lib/perl5/5.30/mach/CORE" Freesubs.c rm -f ../blib/arch/auto/Ace/Freesubs/Freesubs.so cc -shared -L/usr/local/lib/perl5/5.30/mach/CORE -lperl -L/usr/local/lib -fstack-protector-strong Freesubs.o -o ../blib/arch/auto/Ace/Freesubs/Freesubs.so -lc chmod 755 ../blib/arch/auto/Ace/Freesubs/Freesubs.so cp RPC.pm ../blib/lib/Ace/RPC.pm cd ../acelib && make ACEDB_MACHINE=DRAGONFLY all cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c freesubs.c freesubs.c: In function 'freecard': freesubs.c:195:10: warning: this 'while' clause does not guard... [-Wmisleading-indentation] { while ((ch = _FREECHAR) != '\n' && ch != (unsigned char)EOF) ; ^~~~~ freesubs.c:196:3: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' goto got_line ; ^~~~ freesubs.c: In function 'freeread': freesubs.c:324:8: warning: this 'while' clause does not guard... [-Wmisleading-indentation] { while (getc(fil) != '\n' && !feof(fil)) ; ^~~~~ freesubs.c:325:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while' ++*line ; ^~ In file included from freesubs.c:25: At top level: ./wh/version.h:111:20: warning: 'ut_copyright_string' defined but not used [-Wunused-variable] static const char *ut_copyright_string = \ ^~~~~~~~~~~~~~~~~~~ freesubs.c:38:1: note: in expansion of macro 'UT_COPYRIGHT_STRING' UT_COPYRIGHT_STRING(FREE_TITLE, FREE_VERSION, FREE_RELEASE, FREE_UPDATE, FREE_DESC) ^~~~~~~~~~~~~~~~~~~ cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c freeout.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c messubs.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c memsubs.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c arraysub.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c liste.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c filsubs.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c heap.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c timesubs.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c bump.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c randsubs.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c call.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c menu.c menu.c: In function 'menuAddItem': menu.c:123:7: warning: this 'for' clause does not guard... [-Wmisleading-indentation] { for (below = menu->items ; ^~~ menu.c:126:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' if (!below) ^~ cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c dict.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c helpsubs.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c texthelp.c texthelp.c: In function 'printTextSection': texthelp.c:213:16: warning: variable 'currentLink' set but not used [-Wunused-but-set-variable] static char *currentLink ; ^~~~~~~~~~~ texthelp.c:210:5: warning: variable 'MODE_HEADER' set but not used [-Wunused-but-set-variable] MODE_HEADER=FALSE, ^~~~~~~~~~~ texthelp.c:209:5: warning: variable 'MODE_HREF' set but not used [-Wunused-but-set-variable] MODE_HREF=FALSE, ^~~~~~~~~ rpcgen -b -I -K -1 rpcace.x cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -c aceclientlib.c aceclientlib.c: In function 'wakeUp': aceclientlib.c:44:14: warning: variable 'sig' set but not used [-Wunused-but-set-variable] static int sig = 0 ; ^~~ cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c rpcace_clnt.c cc -DPIC -fPIC -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -fPIC -I. -I./wh -DDRAGONFLY -c -pipe -O2 -fno-strict-aliasing -g -Wall -DACEDB4 -c rpcace_xdr.c ar rlu libaceperl.a freesubs.o freeout.o messubs.o memsubs.o arraysub.o liste.o filsubs.o heap.o timesubs.o bump.o randsubs.o call.o menu.o dict.o helpsubs.o texthelp.o aceclientlib.o rpcace_clnt.o rpcace_xdr.o /usr/libexec/binutils227/elf/ar: `u' modifier ignored since `D' is the default (see `U') /usr/libexec/binutils227/elf/ar: creating libaceperl.a if ( true ) then ranlib libaceperl.a; fi Running Mkbootstrap for RPC () chmod 644 "RPC.bs" "/usr/local/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- RPC.bs ../blib/arch/auto/Ace/RPC/RPC.bs 644 "/usr/local/bin/perl" "/usr/local/lib/perl5/5.30/ExtUtils/xsubpp" -noprototypes -typemap '/usr/local/lib/perl5/5.30/ExtUtils/typemap' RPC.xs > RPC.xsc mv RPC.xsc RPC.c cc -c -I./acelib/wh -I../acelib/wh -DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -DUSE_THREAD_SAFE_LOCALE -fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_FORTIFY_SOURCE=2 -pipe -O2 -fno-strict-aliasing -DVERSION=\"1.00\" -DXS_VERSION=\"1.00\" -DPIC -fPIC "-I/usr/local/lib/perl5/5.30/mach/CORE" RPC.c rm -f ../blib/arch/auto/Ace/RPC/RPC.so cc -shared -L/usr/local/lib/perl5/5.30/mach/CORE -lperl -L/usr/local/lib -fstack-protector-strong RPC.o -o ../blib/arch/auto/Ace/RPC/RPC.so ../acelib/libaceperl.a -lc filsubs.c:496: warning: warning: tempnam() possibly used unsafely; consider using mkstemp() chmod 755 ../blib/arch/auto/Ace/RPC/RPC.so "/usr/local/bin/perl" "-Iblib/arch" "-Iblib/lib" make_docs.PLS .docs Creating HTML documentation in docs... ....done! "/usr/local/bin/perl" "-Iblib/arch" "-Iblib/lib" util/ace.PLS util/ace.pl Extracting ace.pl (with variable substitutions) "/usr/local/bin/perl" "-Iblib/arch" "-Iblib/lib" util/install.PLS util/install.pl Extracting install.pl (with variable substitutions) cp util/ace.pl blib/script/ace.pl "/usr/local/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/ace.pl Manifying 1 pod document Manifying 35 pod documents SUCCEEDED 00:00:12 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> p5-AcePerl-1.92_5 depends on package: p5-Cache-Cache>=0 - found ===> p5-AcePerl-1.92_5 depends on package: perl5>=5.30.r1<5.31 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for p5-AcePerl-1.92_5 ===> p5-AcePerl-1.92_5 depends on package: p5-Cache-Cache>=0 - found ===> p5-AcePerl-1.92_5 depends on package: perl5>=5.30.r1<5.31 - found ===> Generating temporary packing list "/usr/local/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- Freesubs.bs ../blib/arch/auto/Ace/Freesubs/Freesubs.bs 644 "/usr/local/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- RPC.bs ../blib/arch/auto/Ace/RPC/RPC.bs 644 Manifying 1 pod document Manifying 35 pod documents Files found in blib/arch: installing files in blib/lib into architecture dependent library tree Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Freesubs/Freesubs.so Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/RPC/RPC.so Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace.pm Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/GFF/Filehandle.pm Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/class_count.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/version.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/_register_iterator.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/autosplit.ix Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/parse_file.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/status.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/classes.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/pick.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/date.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/find.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/_unregister_iterator.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/freeprotect.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/fetch_many.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/_save_iterator.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/ping.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/date_style.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/put.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/datetime.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/auto_save.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/title.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/debug.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/timestamps.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/parse_longtext.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/split.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/layout.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/parse.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/_restore_iterator.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/grep.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/new.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/autosplit.ix Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/asHTML.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/escapeXML.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/asAce.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/timestamp.al Installing 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/construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/commit.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/add_tree.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/_insert.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/asTable.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/_asHTML.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/asPeptide.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/_xmlNumber.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/_to_ace_date.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/asGif.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/replace.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Object/_asAce.al Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Sequence/autosplit.ix Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Sequence/Feature/autosplit.ix Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace/Freesubs.pm Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace/RPC.pm Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace/Model.pm Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace/Local.pm 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/construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace/Browser/SiteDefs.pm Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace/Browser/GeneSubs.pm Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace/Browser/SearchSubs.pm Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace/Browser/TreeSubs.pm Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace/Browser/AceSubs.pm Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace/Sequence/Gene.pm Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace/Sequence/Homol.pm Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/Ace/Sequence/FeatureList.pm Installing 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Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Browser::SiteDefs.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::ex.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Sequence::Homol.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::graded_segments.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Panel.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::dot.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::line.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::span.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Browser::AceSubs.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Model.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Sequence::FeatureList.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Sequence::Gene.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::box.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::primers.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::toomany.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::group.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Object.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::triangle.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Sequence::GappedAlignment.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Sequence::Multi.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Local.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::GlyphFactory.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Iterator.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Sequence::Feature.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Fk.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::anchored_arrow.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::arrow.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Browser::SearchSubs.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::transcript.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/man/man3/Ace::Graphics::Glyph::segments.3 Installing /construction/biology/p5-AcePerl/stage/usr/local/bin/ace.pl /usr/bin/strip /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/Freesubs/Freesubs.so /usr/bin/strip /construction/biology/p5-AcePerl/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/Ace/RPC/RPC.so ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Notice: You have some Perl modules as dependencies but you do not have devel/p5-Module-CoreList installed, the perlcore QA check gets better results when using it, especially with older Perl versions. Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:02 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for p5-AcePerl-1.92_5 file sizes/checksums [146]: 0% file sizes/checksums [146]: 68% file sizes/checksums [146]: 100% packing files [146]: 0% packing files [146]: 68% packing files [146]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:01 TOTAL TIME 00:00:22