------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/metis-5.1.0_8.txz Installing /packages/All/tbb-2020.1.txz Installing /packages/All/indexinfo-0.3.1.txz Installing /packages/All/gmp-6.2.0.txz Installing /packages/All/mpfr-4.0.2.txz Installing /packages/All/mpc-1.1.0_2.txz UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/gettext-runtime-0.20.1.txz Installing /packages/All/binutils-2.33.1_2,1.txz Installing /packages/All/gcc8-8.4.0.txz ===== Message from gcc8-8.4.0: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/openblas-0.3.7_2,1.txz Installing /packages/All/suitesparse-5.4.0_5.txz Installing /packages/All/expat-2.2.8.txz Installing /packages/All/libffi-3.2.1_3.txz Installing /packages/All/ncurses-6.1.20190525.txz Installing /packages/All/readline-8.0.4.txz Installing /packages/All/openssl-1.1.1d,1.txz Installing /packages/All/python27-2.7.17_1.txz ===== Message from python27-2.7.17_1: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter Installing /packages/All/py27-setuptools-44.0.0.txz ===== Message from py27-setuptools-44.0.0: -- Only /usr/local/bin/easy_install-2.7 script has been installed since Python 2.7 is not the default Python version. Installing /packages/All/py27-numpy-1.16.5_4,1.txz Installing /packages/All/hdf-szip-2.1.1.txz Installing /packages/All/hdf5-1.10.6.txz Installing /packages/All/py27-six-1.14.0.txz Installing /packages/All/py27-h5py-2.10.0.txz Installing /packages/All/freetype2-2.10.1.txz ===== Message from freetype2-2.10.1: -- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. If LONG_PCF_NAMES port's option was enabled, the PCF family names may include the foundry and information whether they contain wide characters. For example, "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at run time with using pcf:no-long-family-names property, if needed. Example: FREETYPE_PROPERTIES=pcf:no-long-family-names=1 How to recreate fontconfig cache with using such environment variable, if needed: # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/site/index.html, if documentation was installed). Installing /packages/All/png-1.6.37.txz Installing /packages/All/fontconfig-2.12.6,1.txz Running fc-cache to build fontconfig cache... /usr/local/share/fonts: skipping, no such directory /usr/local/lib/X11/fonts: skipping, no such directory /var/db/fontconfig: cleaning cache directory fc-cache: succeeded Installing /packages/All/tcl86-8.6.10.txz Installing /packages/All/pcre-8.43_2.txz Installing /packages/All/libxml2-2.9.10.txz Installing /packages/All/libiconv-1.14_11.txz Installing /packages/All/python37-3.7.6.txz ===== Message from python37-3.7.6: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py37-gdbm databases/py-gdbm@py37 py37-sqlite3 databases/py-sqlite3@py37 py37-tkinter x11-toolkits/py-tkinter@py37 Installing /packages/All/glib-2.56.3_7,1.txz No schema files found: doing nothing. Installing /packages/All/atk-2.28.1.txz Installing /packages/All/wayland-1.16.0.txz Installing /packages/All/pciids-20200222.txz Installing /packages/All/libpciaccess-0.16.txz Installing /packages/All/libdrm-2.4.100.txz Installing /packages/All/libelf-0.8.13_3.txz Installing /packages/All/libXau-1.0.9.txz Installing /packages/All/libpthread-stubs-0.4.txz Installing /packages/All/xorgproto-2019.2.txz Installing /packages/All/libXdmcp-1.1.3.txz Installing /packages/All/libxcb-1.13.1.txz Installing /packages/All/libX11-1.6.9,1.txz Installing /packages/All/libXfixes-5.0.3_2.txz Installing /packages/All/libXdamage-1.1.5.txz Installing /packages/All/libXext-1.3.4,1.txz Installing /packages/All/libXrender-0.9.10_2.txz Installing /packages/All/libXrandr-1.5.2.txz Installing /packages/All/libxshmfence-1.3.txz Installing /packages/All/libXxf86vm-1.1.4_3.txz Installing /packages/All/mesa-libs-18.3.2_4.txz Installing /packages/All/pixman-0.38.4.txz Installing /packages/All/cairo-1.16.0,2.txz Installing /packages/All/jbigkit-2.1_1.txz Installing /packages/All/jpeg-turbo-2.0.4.txz Installing /packages/All/tiff-4.1.0.txz Installing /packages/All/shared-mime-info-1.10_2.txz Installing /packages/All/gdk-pixbuf2-2.40.0.txz Installing /packages/All/libdaemon-0.14_1.txz Installing /packages/All/libICE-1.0.10,1.txz Installing /packages/All/libSM-1.2.3,1.txz Installing /packages/All/dbus-1.12.16.txz ===> Creating groups. Creating group 'messagebus' with gid '556'. ===> Creating users Creating user 'messagebus' with uid '556'. Installing /packages/All/dbus-glib-0.110.txz Installing /packages/All/gdbm-1.18.1_1.txz Installing /packages/All/gobject-introspection-1.56.1,1.txz Installing /packages/All/gnome_subr-1.0.txz Installing /packages/All/avahi-app-0.7_2.txz ===> Creating groups. Creating group 'avahi' with gid '558'. ===> Creating users Creating user 'avahi' with uid '558'. Installing /packages/All/nettle-3.5.1_1.txz Installing /packages/All/libtasn1-4.15.0.txz Installing /packages/All/libunistring-0.9.10_1.txz Installing /packages/All/libidn2-2.3.0_1.txz Installing /packages/All/ca_root_nss-3.51.txz ===== Message from ca_root_nss-3.51: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem Installing /packages/All/p11-kit-0.23.18.1.txz Installing /packages/All/tpm-emulator-0.7.4_2.txz ===> Creating groups. Creating group '_tss' with gid '601'. ===> Creating users Creating user '_tss' with uid '601'. Installing /packages/All/trousers-0.3.14_2.txz ===> Creating groups. Using existing group '_tss'. ===> Creating users Using existing user '_tss'. ===== Message from trousers-0.3.14_2: -- To run tcsd automatically, add the following line to /etc/rc.conf: tcsd_enable="YES" You might want to edit /usr/local/etc/tcsd.conf to reflect your setup. If you want to use tcsd with software TPM emulator, use the following configuration in /etc/rc.conf: tcsd_enable="YES" tcsd_mode="emulator" tpmd_enable="YES" To use TPM, add your_account to '_tss' group like following: # pw groupmod _tss -m your_account Installing /packages/All/gnutls-3.6.12.txz Installing /packages/All/libpaper-1.1.24.4.txz Installing /packages/All/cups-2.2.13.txz ===> Creating groups. Creating group 'cups' with gid '193'. ===> Creating users Creating user 'cups' with uid '193'. Installing /packages/All/graphite2-1.3.13_1.txz Installing /packages/All/harfbuzz-2.6.4.txz Installing /packages/All/fribidi-0.19.7.txz Installing /packages/All/libfontenc-1.1.4.txz Installing /packages/All/mkfontscale-1.2.1.txz Installing /packages/All/font-bh-ttf-1.0.3_4.txz Installing /packages/All/font-misc-meltho-1.0.3_4.txz Installing /packages/All/font-misc-ethiopic-1.0.3_4.txz Installing /packages/All/encodings-1.0.5,1.txz Installing /packages/All/dejavu-2.37_1.txz ===== Message from dejavu-2.37_1: -- Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. Installing /packages/All/xorg-fonts-truetype-7.7_1.txz Installing /packages/All/libXft-2.3.3.txz Installing /packages/All/pango-1.42.4_3.txz Installing /packages/All/hicolor-icon-theme-0.17.txz Installing /packages/All/libXinerama-1.1.4_2,1.txz Installing /packages/All/libXi-1.7.10,1.txz Installing /packages/All/libXcursor-1.2.0.txz Installing /packages/All/libXcomposite-0.4.5,1.txz Installing /packages/All/gtk-update-icon-cache-2.24.32.txz Installing /packages/All/gtk2-2.24.32.txz Installing /packages/All/xmlcatmgr-2.2_2.txz + Creating /usr/local/share/sgml/catalog + Registering CATALOG catalog.ports (SGML) + Creating /usr/local/share/sgml/catalog.ports + Creating /usr/local/share/xml/catalog + Registering nextCatalog catalog.ports (XML) + Creating /usr/local/share/xml/catalog.ports ===== Message from xmlcatmgr-2.2_2: -- The following catalogs are installed: 1) /usr/local/share/sgml/catalog The top level catalog for SGML stuff. It is not changed by any ports/packages except textproc/xmlcatmgr. 2) /usr/local/share/sgml/catalog.ports This catalog is for handling SGML stuff installed under /usr/local/share/sgml. It is changed by ports/packages. 3) /usr/local/share/xml/catalog The top level catalog for XML stuff. It is not changed by any ports/packages except textproc/xmlcatmgr. 4) /usr/local/share/xml/catalog.ports This catalog is for handling XML stuff installed under /usr/local/share/xml. It is changed by ports/packages. Installing /packages/All/libglade2-2.6.4_10.txz Installing /packages/All/py27-cycler-0.10.0.txz Installing /packages/All/py27-dateutil-2.8.0.txz Installing /packages/All/py27-pytz-2019.3,1.txz Installing /packages/All/py27-pyparsing-2.4.6.txz Installing /packages/All/py27-futures-3.3.0.txz Installing /packages/All/py27-singledispatch-3.4.0.3_1.txz Installing /packages/All/py27-backports_abc-0.5.txz Installing /packages/All/py27-tornado-5.1.1.txz Installing /packages/All/py27-kiwisolver-1.1.0.txz Installing /packages/All/libXScrnSaver-1.2.3_2.txz Installing /packages/All/tk86-8.6.10_1.txz Installing /packages/All/py27-tkinter-2.7.17_6.txz UNFLAVORED devel/py-gobject -> use devel/py-gobject@py27 Installing /packages/All/py27-cairo-1.18.1_1.txz Installing /packages/All/py27-gobject-2.28.6_8.txz UNFLAVORED x11-toolkits/py-gtk2 -> use x11-toolkits/py-gtk2@py27 UNFLAVORED devel/py-gobject -> use devel/py-gobject@py27 Installing /packages/All/py27-gtk2-2.24.0_5.txz Installing /packages/All/py27-backports-1.txz Installing /packages/All/py27-backports.functools_lru_cache-1.5.txz Installing /packages/All/py27-matplotlib-2.2.4_1.txz Installing /packages/All/py27-yaml-5.2.txz Installing /packages/All/py27-cython-0.29.15.txz UNFLAVORED devel/binutils -> use devel/binutils@native UNFLAVORED devel/py-gobject -> use devel/py-gobject@py27 UNFLAVORED x11-toolkits/py-gtk2 -> use x11-toolkits/py-gtk2@py27 UNFLAVORED devel/py-gobject -> use devel/py-gobject@py27 SUCCEEDED 00:01:10 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> py27-phonopy-2.3.0 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> py27-phonopy-2.3.0 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py27-phonopy-2.3.0 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> py27-phonopy-2.3.0 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py27-phonopy-2.3.0 for building => SHA256 Checksum OK for phonopy-2.3.0.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> py27-phonopy-2.3.0 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py27-phonopy-2.3.0 for building ===> Extracting for py27-phonopy-2.3.0 => SHA256 Checksum OK for phonopy-2.3.0.tar.gz. Extracted Memory Use: 29.79M SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for py27-phonopy-2.3.0 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> py27-phonopy-2.3.0 depends on package: py27-numpy>=1.15,1<1.19,1 - found ===> py27-phonopy-2.3.0 depends on package: py27-h5py>0 - found ===> py27-phonopy-2.3.0 depends on package: py27-matplotlib>0 - found ===> py27-phonopy-2.3.0 depends on package: py27-yaml>0 - found ===> py27-phonopy-2.3.0 depends on executable: cython-2.7 - found ===> py27-phonopy-2.3.0 depends on package: py27-setuptools>0 - found ===> py27-phonopy-2.3.0 depends on file: /usr/local/bin/python2.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> py27-phonopy-2.3.0 depends on package: py27-numpy>=1.15,1<1.19,1 - found ===> py27-phonopy-2.3.0 depends on package: py27-h5py>0 - found ===> py27-phonopy-2.3.0 depends on package: py27-matplotlib>0 - found ===> py27-phonopy-2.3.0 depends on package: py27-yaml>0 - found ===> py27-phonopy-2.3.0 depends on executable: cython-2.7 - found ===> py27-phonopy-2.3.0 depends on package: py27-setuptools>0 - found ===> py27-phonopy-2.3.0 depends on file: /usr/local/bin/python2.7 - found ===> Configuring for py27-phonopy-2.3.0 setuptools is used. running config SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for py27-phonopy-2.3.0 setuptools is used. running build running build_py creating build creating build/lib.dragonfly-5.9-x86_64-2.7 creating build/lib.dragonfly-5.9-x86_64-2.7/phonopy copying phonopy/units.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy copying phonopy/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy copying phonopy/api_gruneisen.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy copying phonopy/version.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy copying phonopy/api_phonopy.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy copying phonopy/api_qha.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy copying phonopy/file_IO.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy creating build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui copying phonopy/cui/load.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui copying phonopy/cui/show_symmetry.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui copying phonopy/cui/load_helper.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui copying phonopy/cui/phonopy_argparse.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui copying phonopy/cui/settings.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui copying phonopy/cui/collect_cell_info.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui copying phonopy/cui/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui creating build/lib.dragonfly-5.9-x86_64-2.7/phonopy/gruneisen copying phonopy/gruneisen/core.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/gruneisen copying phonopy/gruneisen/mesh.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/gruneisen copying phonopy/gruneisen/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/gruneisen copying phonopy/gruneisen/band_structure.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/gruneisen copying phonopy/gruneisen/thermal_properties.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/gruneisen creating build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic copying phonopy/harmonic/displacement.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic copying phonopy/harmonic/dynmat_to_fc.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic copying phonopy/harmonic/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic copying phonopy/harmonic/forces.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic copying phonopy/harmonic/derivative_dynmat.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic copying phonopy/harmonic/dynamical_matrix.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic copying phonopy/harmonic/force_constants.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic creating build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/abinit.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/siesta.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/calculator.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/dftbp.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/FHIaims.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/turbomole.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/vasp.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/elk.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/fc_calculator.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/qe.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/wien2k.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/cif.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/crystal.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/hiphive.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/phonopy_yaml.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/alm.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface copying phonopy/interface/cp2k.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface creating build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/thermal_displacement.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/mesh.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/animation.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/moment.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/tetrahedron_mesh.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/thermal_properties.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/dos.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/qpoints.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/irreps.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/modulation.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/degeneracy.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/band_structure.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/random_displacements.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/group_velocity.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon copying phonopy/phonon/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon creating build/lib.dragonfly-5.9-x86_64-2.7/phonopy/qha copying phonopy/qha/electron.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/qha copying phonopy/qha/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/qha copying phonopy/qha/core.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/qha copying phonopy/qha/eos.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/qha creating build/lib.dragonfly-5.9-x86_64-2.7/phonopy/spectrum copying phonopy/spectrum/velocity.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/spectrum copying phonopy/spectrum/dynamic_structure_factor.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/spectrum copying phonopy/spectrum/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/spectrum creating build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure copying phonopy/structure/cells.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure copying phonopy/structure/tetrahedron_method.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure copying phonopy/structure/grid_points.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure copying phonopy/structure/symmetry.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure copying phonopy/structure/atoms.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure copying phonopy/structure/brillouin_zone.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure copying phonopy/structure/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure copying phonopy/structure/spglib.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure creating build/lib.dragonfly-5.9-x86_64-2.7/phonopy/unfolding copying phonopy/unfolding/core.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/unfolding copying phonopy/unfolding/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/phonopy/unfolding running build_ext building 'phonopy._phonopy' extension creating build/temp.dragonfly-5.9-x86_64-2.7 creating build/temp.dragonfly-5.9-x86_64-2.7/c creating build/temp.dragonfly-5.9-x86_64-2.7/c/harmonic creating build/temp.dragonfly-5.9-x86_64-2.7/c/spglib creating build/temp.dragonfly-5.9-x86_64-2.7/c/kspclib cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/harmonic_h -Ic/kspclib_h -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/_phonopy.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/_phonopy.o In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from c/_phonopy.c:40: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/harmonic_h -Ic/kspclib_h -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/harmonic/dynmat.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/harmonic/dynmat.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/harmonic_h -Ic/kspclib_h -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/harmonic/derivative_dynmat.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/harmonic/derivative_dynmat.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/harmonic_h -Ic/kspclib_h -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/kgrid.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/kgrid.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/harmonic_h -Ic/kspclib_h -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/kspclib/tetrahedron_method.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/kspclib/tetrahedron_method.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/c/_phonopy.o build/temp.dragonfly-5.9-x86_64-2.7/c/harmonic/dynmat.o build/temp.dragonfly-5.9-x86_64-2.7/c/harmonic/derivative_dynmat.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/kgrid.o build/temp.dragonfly-5.9-x86_64-2.7/c/kspclib/tetrahedron_method.o -L/usr/local/lib -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/phonopy/_phonopy.so building 'phonopy._spglib' extension cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/_spglib.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/_spglib.o In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from c/_spglib.c:38: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/arithmetic.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/arithmetic.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/cell.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/cell.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/delaunay.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/delaunay.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/determination.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/determination.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/hall_symbol.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/hall_symbol.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/kgrid.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/kgrid.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/kpoint.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/kpoint.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/mathfunc.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/mathfunc.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/niggli.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/niggli.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/overlap.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/overlap.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/pointgroup.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/pointgroup.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/primitive.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/primitive.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/refinement.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/refinement.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/sitesym_database.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/sitesym_database.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/site_symmetry.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/site_symmetry.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/spacegroup.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/spacegroup.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/spg_database.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/spg_database.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/spglib.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/spglib.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/spin.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/spin.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -Ic/spglib_h -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c c/spglib/symmetry.c -o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/symmetry.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/c/_spglib.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/arithmetic.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/cell.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/delaunay.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/determination.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/hall_symbol.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/kgrid.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/kpoint.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/mathfunc.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/niggli.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/overlap.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/pointgroup.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/primitive.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/refinement.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/sitesym_database.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/site_symmetry.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/spacegroup.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/spg_database.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/spglib.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/spin.o build/temp.dragonfly-5.9-x86_64-2.7/c/spglib/symmetry.o -L/usr/local/lib -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/phonopy/_spglib.so running build_scripts creating build/scripts-2.7 copying and adjusting scripts/phonopy -> build/scripts-2.7 copying and adjusting scripts/phonopy-qha -> build/scripts-2.7 copying and adjusting scripts/phonopy-FHI-aims -> build/scripts-2.7 copying and adjusting scripts/phonopy-bandplot -> build/scripts-2.7 copying and adjusting scripts/phonopy-vasp-born -> build/scripts-2.7 copying and adjusting scripts/phonopy-vasp-efe -> build/scripts-2.7 copying and adjusting scripts/phonopy-crystal-born -> build/scripts-2.7 copying and adjusting scripts/phonopy-propplot -> build/scripts-2.7 copying and adjusting scripts/phonopy-tdplot -> build/scripts-2.7 copying and adjusting scripts/phonopy-dispmanager -> build/scripts-2.7 copying and adjusting scripts/phonopy-gruneisen -> build/scripts-2.7 copying and adjusting scripts/phonopy-gruneisenplot -> build/scripts-2.7 copying and adjusting scripts/phonopy-pdosplot -> build/scripts-2.7 changing mode of build/scripts-2.7/phonopy from 644 to 755 changing mode of build/scripts-2.7/phonopy-qha from 644 to 755 changing mode of build/scripts-2.7/phonopy-FHI-aims from 644 to 755 changing mode of build/scripts-2.7/phonopy-bandplot from 644 to 755 changing mode of build/scripts-2.7/phonopy-vasp-born from 644 to 755 changing mode of build/scripts-2.7/phonopy-vasp-efe from 644 to 755 changing mode of build/scripts-2.7/phonopy-crystal-born from 644 to 755 changing mode of build/scripts-2.7/phonopy-propplot from 644 to 755 changing mode of build/scripts-2.7/phonopy-tdplot from 644 to 755 changing mode of build/scripts-2.7/phonopy-dispmanager from 644 to 755 changing mode of build/scripts-2.7/phonopy-gruneisen from 644 to 755 changing mode of build/scripts-2.7/phonopy-gruneisenplot from 644 to 755 changing mode of build/scripts-2.7/phonopy-pdosplot from 644 to 755 SUCCEEDED 00:00:09 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> py27-phonopy-2.3.0 depends on package: py27-numpy>=1.15,1<1.19,1 - found ===> py27-phonopy-2.3.0 depends on package: py27-h5py>0 - found ===> py27-phonopy-2.3.0 depends on package: py27-matplotlib>0 - found ===> py27-phonopy-2.3.0 depends on package: py27-yaml>0 - found ===> py27-phonopy-2.3.0 depends on package: py27-setuptools>0 - found ===> py27-phonopy-2.3.0 depends on file: /usr/local/bin/python2.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for py27-phonopy-2.3.0 ===> py27-phonopy-2.3.0 depends on package: py27-numpy>=1.15,1<1.19,1 - found ===> py27-phonopy-2.3.0 depends on package: py27-h5py>0 - found ===> py27-phonopy-2.3.0 depends on package: py27-matplotlib>0 - found ===> py27-phonopy-2.3.0 depends on package: py27-yaml>0 - found ===> py27-phonopy-2.3.0 depends on package: py27-setuptools>0 - found ===> py27-phonopy-2.3.0 depends on file: /usr/local/bin/python2.7 - found ===> Generating temporary packing list setuptools is used. running install running build running build_py running build_ext running build_scripts running install_lib creating /construction/science/py-phonopy/stage/usr/local/lib/python2.7 creating /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages creating /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/_spglib.so -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/api_qha.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy creating /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/animation.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/dos.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/mesh.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/tetrahedron_mesh.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/modulation.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/moment.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/thermal_displacement.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/random_displacements.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/qpoints.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/group_velocity.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/degeneracy.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/thermal_properties.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/irreps.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/phonon/band_structure.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/api_phonopy.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy creating /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/qha copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/qha/electron.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/qha copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/qha/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/qha copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/qha/eos.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/qha copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/qha/core.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/qha creating /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/gruneisen copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/gruneisen/mesh.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/gruneisen copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/gruneisen/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/gruneisen copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/gruneisen/core.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/gruneisen copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/gruneisen/thermal_properties.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/gruneisen copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/gruneisen/band_structure.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/gruneisen creating /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/spectrum copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/spectrum/velocity.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/spectrum copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/spectrum/dynamic_structure_factor.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/spectrum copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/spectrum/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/spectrum copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/api_gruneisen.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy creating /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/phonopy_yaml.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/abinit.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/dftbp.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/vasp.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/calculator.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/qe.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/wien2k.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/FHIaims.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/crystal.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/alm.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/hiphive.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/siesta.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/turbomole.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/cif.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/fc_calculator.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/elk.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/interface/cp2k.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface creating /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic/force_constants.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic/displacement.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic/forces.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic/dynamical_matrix.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic/derivative_dynmat.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/harmonic/dynmat_to_fc.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/units.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/file_IO.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy creating /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/unfolding copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/unfolding/core.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/unfolding copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/unfolding/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/unfolding creating /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui/show_symmetry.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui/settings.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui/collect_cell_info.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui/load.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui/load_helper.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/cui/phonopy_argparse.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/version.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy creating /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure/atoms.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure/symmetry.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure/grid_points.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure/cells.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure/brillouin_zone.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure/spglib.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure/tetrahedron_method.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/structure/__init__.py -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure copying build/lib.dragonfly-5.9-x86_64-2.7/phonopy/_phonopy.so -> /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/api_qha.py to api_qha.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/animation.py to animation.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/__init__.py to __init__.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/dos.py to dos.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/mesh.py to mesh.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/tetrahedron_mesh.py to tetrahedron_mesh.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/modulation.py to modulation.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/moment.py to moment.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/thermal_displacement.py to thermal_displacement.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/random_displacements.py to random_displacements.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/qpoints.py to qpoints.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/group_velocity.py to group_velocity.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/degeneracy.py to degeneracy.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/thermal_properties.py to thermal_properties.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/irreps.py to irreps.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/phonon/band_structure.py to band_structure.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/api_phonopy.py to api_phonopy.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/qha/electron.py to electron.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/qha/__init__.py to __init__.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/qha/eos.py to eos.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/qha/core.py to core.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/gruneisen/mesh.py to mesh.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/gruneisen/__init__.py to __init__.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/gruneisen/core.py to core.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/gruneisen/thermal_properties.py to thermal_properties.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/gruneisen/band_structure.py to band_structure.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/spectrum/velocity.py to velocity.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/spectrum/dynamic_structure_factor.py to dynamic_structure_factor.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/spectrum/__init__.py to __init__.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/api_gruneisen.py to api_gruneisen.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/phonopy_yaml.py to phonopy_yaml.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/abinit.py to abinit.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/dftbp.py to dftbp.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/vasp.py to vasp.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/calculator.py to calculator.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/qe.py to qe.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/wien2k.py to wien2k.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/FHIaims.py to FHIaims.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/crystal.py to crystal.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/__init__.py to __init__.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/alm.py to alm.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/hiphive.py to hiphive.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/siesta.py to siesta.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/turbomole.py to turbomole.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/cif.py to cif.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/fc_calculator.py to fc_calculator.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/elk.py to elk.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/interface/cp2k.py to cp2k.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic/force_constants.py to force_constants.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic/displacement.py to displacement.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic/forces.py to forces.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic/dynamical_matrix.py to dynamical_matrix.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic/__init__.py to __init__.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic/derivative_dynmat.py to derivative_dynmat.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/harmonic/dynmat_to_fc.py to dynmat_to_fc.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/units.py to units.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/__init__.py to __init__.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/file_IO.py to file_IO.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/unfolding/core.py to core.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/unfolding/__init__.py to __init__.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui/show_symmetry.py to show_symmetry.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui/__init__.py to __init__.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui/settings.py to settings.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui/collect_cell_info.py to collect_cell_info.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui/load.py to load.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui/load_helper.py to load_helper.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/cui/phonopy_argparse.py to phonopy_argparse.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/version.py to version.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure/atoms.py to atoms.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure/symmetry.py to symmetry.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure/grid_points.py to grid_points.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure/cells.py to cells.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure/brillouin_zone.py to brillouin_zone.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure/spglib.py to spglib.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure/tetrahedron_method.py to tetrahedron_method.pyc byte-compiling /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy/structure/__init__.py to __init__.pyc writing byte-compilation script '/tmp/tmpCFzWdK.py' /usr/local/bin/python2.7 -O /tmp/tmpCFzWdK.py removing /tmp/tmpCFzWdK.py running install_egg_info running egg_info writing requirements to phonopy.egg-info/requires.txt writing phonopy.egg-info/PKG-INFO writing top-level names to phonopy.egg-info/top_level.txt writing dependency_links to phonopy.egg-info/dependency_links.txt reading manifest file 'phonopy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.pyc' found under directory 'test' writing manifest file 'phonopy.egg-info/SOURCES.txt' Copying phonopy.egg-info to /construction/science/py-phonopy/stage/usr/local/lib/python2.7/site-packages/phonopy-2.3.0-py2.7.egg-info running install_scripts copying build/scripts-2.7/phonopy-FHI-aims -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-2.7/phonopy-qha -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-2.7/phonopy -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-2.7/phonopy-pdosplot -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-2.7/phonopy-gruneisenplot -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-2.7/phonopy-gruneisen -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-2.7/phonopy-dispmanager -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-2.7/phonopy-tdplot -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-2.7/phonopy-bandplot -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-2.7/phonopy-vasp-born -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-2.7/phonopy-vasp-efe -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-2.7/phonopy-propplot -> /construction/science/py-phonopy/stage/usr/local/bin copying build/scripts-2.7/phonopy-crystal-born -> /construction/science/py-phonopy/stage/usr/local/bin changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-FHI-aims to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-qha to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-pdosplot to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-gruneisenplot to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-gruneisen to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-dispmanager to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-tdplot to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-bandplot to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-vasp-born to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-vasp-efe to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-propplot to 755 changing mode of /construction/science/py-phonopy/stage/usr/local/bin/phonopy-crystal-born to 755 writing list of installed files to '/construction/science/py-phonopy/.PLIST.pymodtmp' ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: 'lib/python2.7/site-packages/phonopy/_spglib.so' is not stripped consider trying INSTALL_TARGET=install-strip or using ${STRIP_CMD} Warning: 'lib/python2.7/site-packages/phonopy/_phonopy.so' is not stripped consider trying INSTALL_TARGET=install-strip or using ${STRIP_CMD} Error: /usr/local/lib/python2.7/site-packages/phonopy/_phonopy.so is linked to /usr/local/lib/libintl.so.8 from devel/gettext-runtime but it is not declared as a dependency Warning: you need USES+=gettext-runtime Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:03 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for py27-phonopy-2.3.0 file sizes/checksums [248]: 0% file sizes/checksums [248]: 40% file sizes/checksums [248]: 80% file sizes/checksums [248]: 100% packing files [248]: 0% packing files [248]: 40% packing files [248]: 80% packing files [248]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:03 TOTAL TIME 00:01:28