------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/metis-5.1.0_8.tgz Message from metis-5.1.0_8: ===> NOTICE: The metis port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port Installing /packages/All/indexinfo-0.3.1.tgz Installing /packages/All/gmp-6.1.2_1.tgz Installing /packages/All/mpfr-4.0.2.tgz Installing /packages/All/mpc-1.1.0_2.tgz Installing /packages/All/gettext-runtime-0.20.1.tgz Installing /packages/All/binutils-2.32_1,1.tgz Installing /packages/All/gcc8-8.3.0_3.tgz Message from gcc8-8.3.0_3: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/blas-3.5.0_6.tgz Installing /packages/All/lapack-3.5.0_8.tgz Installing /packages/All/openblas-0.2.20_10,1.tgz Installing /packages/All/suitesparse-5.2.0_4.tgz Installing /packages/All/expat-2.2.6_1.tgz Installing /packages/All/libffi-3.2.1_3.tgz Installing /packages/All/ncurses-6.1.20190525.tgz Installing /packages/All/readline-8.0.0.tgz Installing /packages/All/openssl-1.0.2s,1.tgz Message from openssl-1.0.2s,1: Edit /usr/local/openssl/openssl.cnf to fit your needs. Installing /packages/All/python27-2.7.16_1.tgz Message from python27-2.7.16_1: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== Installing /packages/All/py27-setuptools-41.0.1.tgz Message from py27-setuptools-41.0.1: ******************************************************************* Only /usr/local/bin/easy_install-2.7 script has been installed since Python 2.7 is not the default Python version. ******************************************************************* Installing /packages/All/py27-numpy-1.16.4_1,1.tgz Installing /packages/All/py27-joblib-0.13.0.tgz Installing /packages/All/py27-six-1.12.0.tgz Installing /packages/All/py27-dateutil-2.8.0.tgz Installing /packages/All/py27-pytz-2019.1,1.tgz Installing /packages/All/sqlite3-3.29.0.tgz Installing /packages/All/py27-sqlite3-2.7.16_7.tgz Installing /packages/All/py27-bottleneck-1.2.1_5.tgz Installing /packages/All/py27-numexpr-2.6.9_1.tgz Installing /packages/All/py27-pandas-0.24.2_1.tgz Message from py27-pandas-0.24.2_1: === Install math/py-statsmodels to enable parts of pandas.stats. Install devel/py-xarray to enable the to_xarray() function. === Installing /packages/All/cblas-1.0_12.tgz Message from cblas-1.0_12: ===> NOTICE: The cblas port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port Installing /packages/All/py27-scipy-1.2.2_1.tgz Installing /packages/All/py27-scikit-learn-0.20.3_1.tgz SUCCEEDED 00:00:12 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- x===> Fetching all distfiles required by py27-oddt-0.6_2 for building SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- x===> Fetching all distfiles required by py27-oddt-0.6_2 for building => SHA256 Checksum OK for oddt-oddt-0.6_GH0.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- x===> Fetching all distfiles required by py27-oddt-0.6_2 for building ===> Extracting for py27-oddt-0.6_2 => SHA256 Checksum OK for oddt-oddt-0.6_GH0.tar.gz. Extracted Memory Use: 50.63M SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- x===> Patching for py27-oddt-0.6_2 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- x===> Configuring for py27-oddt-0.6_2 oddt/__init__.py:50: UserWarning: No toolkit is present. Install OpenBabel or RDKit warnings.warn('No toolkit is present. Install OpenBabel or RDKit') running config SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- x===> Building for py27-oddt-0.6_2 oddt/__init__.py:50: UserWarning: No toolkit is present. Install OpenBabel or RDKit warnings.warn('No toolkit is present. Install OpenBabel or RDKit') running build running build_py creating build creating build/lib creating build/lib/oddt copying oddt/__init__.py -> build/lib/oddt copying oddt/datasets.py -> build/lib/oddt copying oddt/fingerprints.py -> build/lib/oddt copying oddt/interactions.py -> build/lib/oddt copying oddt/metrics.py -> build/lib/oddt copying oddt/pandas.py -> build/lib/oddt copying oddt/shape.py -> build/lib/oddt copying oddt/spatial.py -> build/lib/oddt copying oddt/surface.py -> build/lib/oddt copying oddt/utils.py -> build/lib/oddt copying oddt/virtualscreening.py -> build/lib/oddt creating build/lib/tests copying tests/__init__.py -> build/lib/tests copying tests/test_datasets.py -> build/lib/tests copying tests/test_descriptors.py -> build/lib/tests copying tests/test_fingerprints.py -> build/lib/tests copying tests/test_interactions.py -> build/lib/tests copying tests/test_metrics.py -> build/lib/tests copying tests/test_models.py -> build/lib/tests copying tests/test_pandas.py -> build/lib/tests copying tests/test_scoring.py -> build/lib/tests copying tests/test_shape.py -> build/lib/tests copying tests/test_spatial.py -> build/lib/tests copying tests/test_surface.py -> build/lib/tests copying tests/test_toolkit.py -> build/lib/tests copying tests/test_utils.py -> build/lib/tests copying tests/test_virtualscreening.py -> build/lib/tests copying tests/utils.py -> build/lib/tests creating build/lib/oddt/docking copying oddt/docking/AutodockVina.py -> build/lib/oddt/docking copying oddt/docking/__init__.py -> build/lib/oddt/docking copying oddt/docking/internal.py -> build/lib/oddt/docking creating build/lib/oddt/scoring copying oddt/scoring/__init__.py -> build/lib/oddt/scoring creating build/lib/oddt/toolkits copying oddt/toolkits/__init__.py -> build/lib/oddt/toolkits copying oddt/toolkits/common.py -> build/lib/oddt/toolkits copying oddt/toolkits/ob.py -> build/lib/oddt/toolkits copying oddt/toolkits/rdk.py -> build/lib/oddt/toolkits creating build/lib/oddt/scoring/descriptors copying oddt/scoring/descriptors/__init__.py -> build/lib/oddt/scoring/descriptors copying oddt/scoring/descriptors/binana.py -> build/lib/oddt/scoring/descriptors creating build/lib/oddt/scoring/functions copying oddt/scoring/functions/NNScore.py -> build/lib/oddt/scoring/functions copying oddt/scoring/functions/PLECscore.py -> build/lib/oddt/scoring/functions copying oddt/scoring/functions/RFScore.py -> build/lib/oddt/scoring/functions copying oddt/scoring/functions/__init__.py -> build/lib/oddt/scoring/functions creating build/lib/oddt/scoring/models copying oddt/scoring/models/__init__.py -> build/lib/oddt/scoring/models copying oddt/scoring/models/classifiers.py -> build/lib/oddt/scoring/models copying oddt/scoring/models/regressors.py -> build/lib/oddt/scoring/models creating build/lib/oddt/toolkits/extras copying oddt/toolkits/extras/__init__.py -> build/lib/oddt/toolkits/extras copying oddt/toolkits/extras/rdkit.py -> build/lib/oddt/toolkits/extras creating build/lib/oddt/scoring/functions/NNScore copying oddt/scoring/functions/NNScore/nnscore_descs.csv -> build/lib/oddt/scoring/functions/NNScore creating build/lib/oddt/scoring/functions/RFScore copying oddt/scoring/functions/RFScore/rfscore_descs_v1.csv -> build/lib/oddt/scoring/functions/RFScore copying oddt/scoring/functions/RFScore/rfscore_descs_v2.csv -> build/lib/oddt/scoring/functions/RFScore copying oddt/scoring/functions/RFScore/rfscore_descs_v3.csv -> build/lib/oddt/scoring/functions/RFScore creating build/lib/oddt/scoring/functions/PLECscore copying oddt/scoring/functions/PLECscore/plecscore_linear_p5_l1_s65536_pdbbind2016.json -> build/lib/oddt/scoring/functions/PLECscore running build_scripts creating build/scripts-2.7 copying and adjusting bin/oddt_cli -> build/scripts-2.7 changing mode of build/scripts-2.7/oddt_cli from 644 to 755 SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- x===> Staging for py27-oddt-0.6_2 ===> Generating temporary packing list oddt/__init__.py:50: UserWarning: No toolkit is present. Install OpenBabel or RDKit warnings.warn('No toolkit is present. Install OpenBabel or RDKit') running install running build running build_py running build_scripts running install_lib creating /construction/science/py-oddt/stage/usr/local/lib/python2.7 creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/__init__.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_utils.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_virtualscreening.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_descriptors.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/utils.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_fingerprints.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_scoring.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_pandas.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_spatial.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_toolkit.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_interactions.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_models.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_shape.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_metrics.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_surface.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests copying build/lib/tests/test_datasets.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits copying build/lib/oddt/toolkits/ob.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits copying build/lib/oddt/toolkits/common.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits copying build/lib/oddt/toolkits/rdk.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits copying build/lib/oddt/toolkits/__init__.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits/extras copying build/lib/oddt/toolkits/extras/rdkit.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits/extras copying build/lib/oddt/toolkits/extras/__init__.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits/extras copying build/lib/oddt/__init__.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt copying build/lib/oddt/utils.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/descriptors copying build/lib/oddt/scoring/descriptors/binana.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/descriptors copying build/lib/oddt/scoring/descriptors/__init__.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/descriptors copying build/lib/oddt/scoring/__init__.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions/NNScore copying build/lib/oddt/scoring/functions/NNScore/nnscore_descs.csv -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions/NNScore copying build/lib/oddt/scoring/functions/NNScore.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions/RFScore copying build/lib/oddt/scoring/functions/RFScore/rfscore_descs_v3.csv -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions/RFScore copying build/lib/oddt/scoring/functions/RFScore/rfscore_descs_v2.csv -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions/RFScore copying build/lib/oddt/scoring/functions/RFScore/rfscore_descs_v1.csv -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions/RFScore copying build/lib/oddt/scoring/functions/__init__.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions/PLECscore copying build/lib/oddt/scoring/functions/PLECscore/plecscore_linear_p5_l1_s65536_pdbbind2016.json -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions/PLECscore copying build/lib/oddt/scoring/functions/RFScore.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions copying build/lib/oddt/scoring/functions/PLECscore.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/models copying build/lib/oddt/scoring/models/__init__.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/models copying build/lib/oddt/scoring/models/classifiers.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/models copying build/lib/oddt/scoring/models/regressors.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/models copying build/lib/oddt/spatial.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt copying build/lib/oddt/shape.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt copying build/lib/oddt/datasets.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt copying build/lib/oddt/pandas.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt copying build/lib/oddt/virtualscreening.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt creating /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/docking copying build/lib/oddt/docking/internal.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/docking copying build/lib/oddt/docking/AutodockVina.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/docking copying build/lib/oddt/docking/__init__.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/docking copying build/lib/oddt/surface.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt copying build/lib/oddt/metrics.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt copying build/lib/oddt/fingerprints.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt copying build/lib/oddt/interactions.py -> /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/__init__.py to __init__.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_utils.py to test_utils.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_virtualscreening.py to test_virtualscreening.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_descriptors.py to test_descriptors.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/utils.py to utils.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_fingerprints.py to test_fingerprints.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_scoring.py to test_scoring.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_pandas.py to test_pandas.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_spatial.py to test_spatial.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_toolkit.py to test_toolkit.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_interactions.py to test_interactions.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_models.py to test_models.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_shape.py to test_shape.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_metrics.py to test_metrics.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_surface.py to test_surface.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/tests/test_datasets.py to test_datasets.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits/ob.py to ob.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits/common.py to common.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits/rdk.py to rdk.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits/__init__.py to __init__.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits/extras/rdkit.py to rdkit.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/toolkits/extras/__init__.py to __init__.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/__init__.py to __init__.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/utils.py to utils.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/descriptors/binana.py to binana.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/descriptors/__init__.py to __init__.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/__init__.py to __init__.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions/NNScore.py to NNScore.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions/__init__.py to __init__.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions/RFScore.py to RFScore.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/functions/PLECscore.py to PLECscore.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/models/__init__.py to __init__.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/models/classifiers.py to classifiers.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/scoring/models/regressors.py to regressors.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/spatial.py to spatial.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/shape.py to shape.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/datasets.py to datasets.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/pandas.py to pandas.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/virtualscreening.py to virtualscreening.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/docking/internal.py to internal.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/docking/AutodockVina.py to AutodockVina.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/docking/__init__.py to __init__.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/surface.py to surface.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/metrics.py to metrics.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/fingerprints.py to fingerprints.pyc byte-compiling /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt/interactions.py to interactions.pyc writing byte-compilation script '/tmp/tmp7mGrQt.py' /usr/local/bin/python2.7 -O /tmp/tmp7mGrQt.py removing /tmp/tmp7mGrQt.py running install_egg_info running egg_info creating oddt.egg-info writing requirements to oddt.egg-info/requires.txt writing oddt.egg-info/PKG-INFO writing top-level names to oddt.egg-info/top_level.txt writing dependency_links to oddt.egg-info/dependency_links.txt writing manifest file 'oddt.egg-info/SOURCES.txt' reading manifest file 'oddt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'oddt.egg-info/SOURCES.txt' Copying oddt.egg-info to /construction/science/py-oddt/stage/usr/local/lib/python2.7/site-packages/oddt-0.5-py2.7.egg-info running install_scripts copying build/scripts-2.7/oddt_cli -> /construction/science/py-oddt/stage/usr/local/bin changing mode of /construction/science/py-oddt/stage/usr/local/bin/oddt_cli to 755 writing list of installed files to '/construction/science/py-oddt/.PLIST.pymodtmp' ===> Creating unique files: Move MAN files needing SUFFIX ===> Creating unique files: Move files needing SUFFIX Move: bin/oddt_cli --> bin/oddt_cli-2.7 ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:02 ------------------------------------------------------------------------------- -- Phase: check-plist ------------------------------------------------------------------------------- x====> Checking for pkg-plist issues (check-plist) ===> Parsing plist ===> Checking for items in STAGEDIR missing from pkg-plist ===> Checking for items in pkg-plist which are not in STAGEDIR ===> No pkg-plist issues found (check-plist) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- x===> Building package for py27-oddt-0.6_2 file sizes/checksums [149]: 0% file sizes/checksums [149]: 67% file sizes/checksums [149]: 100% packing files [149]: 0% packing files [149]: 67% packing files [149]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:02 TOTAL TIME 00:00:21