------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/metis-5.1.0_8.txz Installing /packages/All/tbb-2020.1.txz Installing /packages/All/indexinfo-0.3.1.txz Installing /packages/All/gmp-6.2.0.txz Installing /packages/All/mpfr-4.0.2.txz Installing /packages/All/mpc-1.1.0_2.txz UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/gettext-runtime-0.20.1.txz Installing /packages/All/binutils-2.33.1_2,1.txz Installing /packages/All/gcc8-8.4.0.txz ===== Message from gcc8-8.4.0: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/openblas-0.3.7_2,1.txz Installing /packages/All/suitesparse-5.4.0_5.txz Installing /packages/All/expat-2.2.8.txz Installing /packages/All/libffi-3.2.1_3.txz Installing /packages/All/ncurses-6.1.20190525.txz Installing /packages/All/readline-8.0.4.txz Installing /packages/All/openssl-1.1.1d,1.txz Installing /packages/All/python37-3.7.6.txz ===== Message from python37-3.7.6: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py37-gdbm databases/py-gdbm@py37 py37-sqlite3 databases/py-sqlite3@py37 py37-tkinter x11-toolkits/py-tkinter@py37 Installing /packages/All/py37-setuptools-44.0.0.txz Installing /packages/All/py37-numpy-1.16.5_4,1.txz Installing /packages/All/py37-cython-0.29.15.txz Installing /packages/All/hdf-szip-2.1.1.txz Installing /packages/All/hdf5-1.10.6.txz Installing /packages/All/libnghttp2-1.40.0.txz Installing /packages/All/ca_root_nss-3.51.txz ===== Message from ca_root_nss-3.51: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem Installing /packages/All/curl-7.68.0.txz Installing /packages/All/pkgconf-1.6.3,1.txz Installing /packages/All/netcdf-4.7.3.txz UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:00:43 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> py37-netCDF4-1.3.1_7 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> py37-netCDF4-1.3.1_7 depends on file: /usr/local/sbin/pkg - found => Unidata-netcdf4-python-v1.3.1rel_GH0.tar.gz doesn't seem to exist in /distfiles/. => Attempting to fetch https://codeload.github.com/Unidata/netcdf4-python/tar.gz/v1.3.1rel?dummy=/Unidata-netcdf4-python-v1.3.1rel_GH0.tar.gz fetch: https://codeload.github.com/Unidata/netcdf4-python/tar.gz/v1.3.1rel?dummy=/Unidata-netcdf4-python-v1.3.1rel_GH0.tar.gz: size unknown fetch: https://codeload.github.com/Unidata/netcdf4-python/tar.gz/v1.3.1rel?dummy=/Unidata-netcdf4-python-v1.3.1rel_GH0.tar.gz: size of remote file is not known Unidata-netcdf4-python-v1.3.1rel_GH0.tar.gz 0 B 0 Bps Unidata-netcdf4-python-v1.3.1rel_GH0.tar.gz 541 kB 2616 kBps 00s ===> Fetching all distfiles required by py37-netCDF4-1.3.1_7 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> py37-netCDF4-1.3.1_7 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py37-netCDF4-1.3.1_7 for building => SHA256 Checksum OK for Unidata-netcdf4-python-v1.3.1rel_GH0.tar.gz. SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> py37-netCDF4-1.3.1_7 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py37-netCDF4-1.3.1_7 for building ===> Extracting for py37-netCDF4-1.3.1_7 => SHA256 Checksum OK for Unidata-netcdf4-python-v1.3.1rel_GH0.tar.gz. Extracted Memory Use: 1.73M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for py37-netCDF4-1.3.1_7 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> py37-netCDF4-1.3.1_7 depends on package: py37-numpy>=1.15,1<1.19,1 - found ===> py37-netCDF4-1.3.1_7 depends on executable: cython-3.7 - found ===> py37-netCDF4-1.3.1_7 depends on package: py37-setuptools>0 - found ===> py37-netCDF4-1.3.1_7 depends on file: /usr/local/bin/python3.7 - found SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- ===> py37-netCDF4-1.3.1_7 depends on shared library: libhdf5.so - found (/usr/local/lib/libhdf5.so) ===> py37-netCDF4-1.3.1_7 depends on shared library: libnetcdf.so - found (/usr/local/lib/libnetcdf.so) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> py37-netCDF4-1.3.1_7 depends on package: py37-numpy>=1.15,1<1.19,1 - found ===> py37-netCDF4-1.3.1_7 depends on executable: cython-3.7 - found ===> py37-netCDF4-1.3.1_7 depends on package: py37-setuptools>0 - found ===> py37-netCDF4-1.3.1_7 depends on file: /usr/local/bin/python3.7 - found ===> py37-netCDF4-1.3.1_7 depends on shared library: libhdf5.so - found (/usr/local/lib/libhdf5.so) ===> py37-netCDF4-1.3.1_7 depends on shared library: libnetcdf.so - found (/usr/local/lib/libnetcdf.so) ===> Configuring for py37-netCDF4-1.3.1_7 reading from setup.cfg... setup.py:171: DeprecationWarning: The SafeConfigParser class has been renamed to ConfigParser in Python 3.2. This alias will be removed in future versions. Use ConfigParser directly instead. config = configparser.SafeConfigParser() Package hdf5 was not found in the pkg-config search path. Perhaps you should add the directory containing `hdf5.pc' to the PKG_CONFIG_PATH environment variable Package 'hdf5', required by 'virtual:world', not found using nc-config ... HDF5 library version: 1.10.6 found in None using netcdf library version b'4.7.3' using Cython to compile netCDF4.pyx... netcdf lib has group rename capability netcdf lib has nc_inq_path function netcdf lib has nc_inq_format_extended function netcdf lib has nc_open_mem function netcdf lib has cdf-5 format capability netcdf lib does not have netcdf4 parallel functions running config SUCCEEDED 00:00:05 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for py37-netCDF4-1.3.1_7 reading from setup.cfg... setup.py:171: DeprecationWarning: The SafeConfigParser class has been renamed to ConfigParser in Python 3.2. This alias will be removed in future versions. Use ConfigParser directly instead. config = configparser.SafeConfigParser() Package hdf5 was not found in the pkg-config search path. Perhaps you should add the directory containing `hdf5.pc' to the PKG_CONFIG_PATH environment variable Package 'hdf5', required by 'virtual:world', not found using nc-config ... HDF5 library version: 1.10.6 found in None using netcdf library version b'4.7.3' using Cython to compile netCDF4.pyx... netcdf lib has group rename capability netcdf lib has nc_inq_path function netcdf lib has nc_inq_format_extended function netcdf lib has nc_open_mem function netcdf lib has cdf-5 format capability netcdf lib does not have netcdf4 parallel functions running build running build_py creating build creating build/lib.dragonfly-5.9-x86_64-3.7 creating build/lib.dragonfly-5.9-x86_64-3.7/netcdftime copying netcdftime/__init__.py -> build/lib.dragonfly-5.9-x86_64-3.7/netcdftime creating build/lib.dragonfly-5.9-x86_64-3.7/netCDF4 copying netCDF4/__init__.py -> build/lib.dragonfly-5.9-x86_64-3.7/netCDF4 copying netCDF4/utils.py -> build/lib.dragonfly-5.9-x86_64-3.7/netCDF4 running build_ext cythoning netCDF4/_netCDF4.pyx to netCDF4/_netCDF4.c /usr/local/lib/python3.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /construction/science/py-netCDF4/netcdf4-python-1.3.1rel/netCDF4/_netCDF4.pyx tree = Parsing.p_module(s, pxd, full_module_name) warning: netCDF4/_netCDF4.pyx:1887:12: Unreachable code cythoning netcdftime/_netcdftime.pyx to netcdftime/_netcdftime.c /usr/local/lib/python3.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /construction/science/py-netCDF4/netcdf4-python-1.3.1rel/netcdftime/_netcdftime.pyx tree = Parsing.p_module(s, pxd, full_module_name) building 'netCDF4._netCDF4' extension creating build/temp.dragonfly-5.9-x86_64-3.7 creating build/temp.dragonfly-5.9-x86_64-3.7/netCDF4 cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/include -I/usr/local/include -I/usr/local/lib/python3.7/site-packages/numpy/core/include -Iinclude -I/usr/local/include/python3.7m -c netCDF4/_netCDF4.c -o build/temp.dragonfly-5.9-x86_64-3.7/netCDF4/_netCDF4.o In file included from /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from netCDF4/_netCDF4.c:602: /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ netCDF4/_netCDF4.c: In function '__pyx_f_7netCDF4_8_netCDF4__set_att': netCDF4/_netCDF4.c:7438:97: warning: passing argument 5 of 'nc_put_att_string' from incompatible pointer type [-Wincompatible-pointer-types] __pyx_v_ierr = nc_put_att_string(__pyx_t_5, __pyx_v_varid, __pyx_v_attname, __pyx_t_10, __pyx_v_string_ptrs); ^~~~~~~~~~~~~~~~~~~ In file included from netCDF4/_netCDF4.c:600: /usr/local/include/netcdf.h:1032:44: note: expected 'const char **' but argument is of type 'char **' size_t len, const char **op); ~~~~~~~~~~~~~^~ netCDF4/_netCDF4.c:7827:94: warning: passing argument 5 of 'nc_put_att_string' from incompatible pointer type [-Wincompatible-pointer-types] __pyx_v_ierr = nc_put_att_string(__pyx_t_14, __pyx_v_varid, __pyx_v_attname, 1, (&__pyx_v_datstring)); ~^~~~~~~~~~~~~~~~~~~ In file included from netCDF4/_netCDF4.c:600: /usr/local/include/netcdf.h:1032:44: note: expected 'const char **' but argument is of type 'char **' size_t len, const char **op); ~~~~~~~~~~~~~^~ netCDF4/_netCDF4.c: In function '__pyx_f_7netCDF4_8_netCDF4__read_compound': netCDF4/_netCDF4.c:55870:35: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] for (__pyx_v_nf = 0; __pyx_v_nf < __pyx_t_4; __pyx_v_nf++) { ^ netCDF4/_netCDF4.c: In function '__pyx_f_7netCDF4_8_netCDF4__read_enum': netCDF4/_netCDF4.c:59689:39: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] for (__pyx_v_nmem = 0; __pyx_v_nmem < __pyx_t_11; __pyx_v_nmem++) { ^ netCDF4/_netCDF4.c: In function '__pyx_pymod_exec__netCDF4': netCDF4/_netCDF4.c:80934:3: warning: returning 'void *' from a function with return type 'int' makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-3.7/netCDF4/_netCDF4.o -L/usr/local/lib -L/usr/local/lib -L/usr/local/lib -R/usr/local/lib -R/usr/local/lib -lnetcdf -lhdf5_hl -lhdf5 -lpython3.7m -o build/lib.dragonfly-5.9-x86_64-3.7/netCDF4/_netCDF4.so building 'netcdftime._netcdftime' extension creating build/temp.dragonfly-5.9-x86_64-3.7/netcdftime cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/include/python3.7m -c netcdftime/_netcdftime.c -o build/temp.dragonfly-5.9-x86_64-3.7/netcdftime/_netcdftime.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-3.7/netcdftime/_netcdftime.o -L/usr/local/lib -lpython3.7m -o build/lib.dragonfly-5.9-x86_64-3.7/netcdftime/_netcdftime.so SUCCEEDED 00:03:43 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> py37-netCDF4-1.3.1_7 depends on package: py37-numpy>=1.15,1<1.19,1 - found ===> py37-netCDF4-1.3.1_7 depends on executable: cython-3.7 - found ===> py37-netCDF4-1.3.1_7 depends on package: py37-setuptools>0 - found ===> py37-netCDF4-1.3.1_7 depends on file: /usr/local/bin/python3.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for py37-netCDF4-1.3.1_7 ===> py37-netCDF4-1.3.1_7 depends on package: py37-numpy>=1.15,1<1.19,1 - found ===> py37-netCDF4-1.3.1_7 depends on executable: cython-3.7 - found ===> py37-netCDF4-1.3.1_7 depends on package: py37-setuptools>0 - found ===> py37-netCDF4-1.3.1_7 depends on file: /usr/local/bin/python3.7 - found ===> Generating temporary packing list reading from setup.cfg... setup.py:171: DeprecationWarning: The SafeConfigParser class has been renamed to ConfigParser in Python 3.2. This alias will be removed in future versions. Use ConfigParser directly instead. config = configparser.SafeConfigParser() Package hdf5 was not found in the pkg-config search path. Perhaps you should add the directory containing `hdf5.pc' to the PKG_CONFIG_PATH environment variable Package 'hdf5', required by 'virtual:world', not found using nc-config ... HDF5 library version: 1.10.6 found in None using netcdf library version b'4.7.3' using Cython to compile netCDF4.pyx... netcdf lib has group rename capability netcdf lib has nc_inq_path function netcdf lib has nc_inq_format_extended function netcdf lib has nc_open_mem function netcdf lib has cdf-5 format capability netcdf lib does not have netcdf4 parallel functions running install running build running build_py running build_ext cythoning netCDF4/_netCDF4.pyx to netCDF4/_netCDF4.c /usr/local/lib/python3.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /construction/science/py-netCDF4/netcdf4-python-1.3.1rel/netCDF4/_netCDF4.pyx tree = Parsing.p_module(s, pxd, full_module_name) warning: netCDF4/_netCDF4.pyx:1887:12: Unreachable code cythoning netcdftime/_netcdftime.pyx to netcdftime/_netcdftime.c /usr/local/lib/python3.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /construction/science/py-netCDF4/netcdf4-python-1.3.1rel/netcdftime/_netcdftime.pyx tree = Parsing.p_module(s, pxd, full_module_name) building 'netCDF4._netCDF4' extension cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/include -I/usr/local/include -I/usr/local/lib/python3.7/site-packages/numpy/core/include -Iinclude -I/usr/local/include/python3.7m -c netCDF4/_netCDF4.c -o build/temp.dragonfly-5.9-x86_64-3.7/netCDF4/_netCDF4.o In file included from /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from netCDF4/_netCDF4.c:602: /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ netCDF4/_netCDF4.c: In function '__pyx_f_7netCDF4_8_netCDF4__set_att': netCDF4/_netCDF4.c:7438:97: warning: passing argument 5 of 'nc_put_att_string' from incompatible pointer type [-Wincompatible-pointer-types] __pyx_v_ierr = nc_put_att_string(__pyx_t_5, __pyx_v_varid, __pyx_v_attname, __pyx_t_10, __pyx_v_string_ptrs); ^~~~~~~~~~~~~~~~~~~ In file included from netCDF4/_netCDF4.c:600: /usr/local/include/netcdf.h:1032:44: note: expected 'const char **' but argument is of type 'char **' size_t len, const char **op); ~~~~~~~~~~~~~^~ netCDF4/_netCDF4.c:7827:94: warning: passing argument 5 of 'nc_put_att_string' from incompatible pointer type [-Wincompatible-pointer-types] __pyx_v_ierr = nc_put_att_string(__pyx_t_14, __pyx_v_varid, __pyx_v_attname, 1, (&__pyx_v_datstring)); ~^~~~~~~~~~~~~~~~~~~ In file included from netCDF4/_netCDF4.c:600: /usr/local/include/netcdf.h:1032:44: note: expected 'const char **' but argument is of type 'char **' size_t len, const char **op); ~~~~~~~~~~~~~^~ netCDF4/_netCDF4.c: In function '__pyx_f_7netCDF4_8_netCDF4__read_compound': netCDF4/_netCDF4.c:55870:35: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] for (__pyx_v_nf = 0; __pyx_v_nf < __pyx_t_4; __pyx_v_nf++) { ^ netCDF4/_netCDF4.c: In function '__pyx_f_7netCDF4_8_netCDF4__read_enum': netCDF4/_netCDF4.c:59689:39: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] for (__pyx_v_nmem = 0; __pyx_v_nmem < __pyx_t_11; __pyx_v_nmem++) { ^ netCDF4/_netCDF4.c: In function '__pyx_pymod_exec__netCDF4': netCDF4/_netCDF4.c:80934:3: warning: returning 'void *' from a function with return type 'int' makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-3.7/netCDF4/_netCDF4.o -L/usr/local/lib -L/usr/local/lib -L/usr/local/lib -R/usr/local/lib -R/usr/local/lib -lnetcdf -lhdf5_hl -lhdf5 -lpython3.7m -o build/lib.dragonfly-5.9-x86_64-3.7/netCDF4/_netCDF4.so building 'netcdftime._netcdftime' extension cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/include/python3.7m -c netcdftime/_netcdftime.c -o build/temp.dragonfly-5.9-x86_64-3.7/netcdftime/_netcdftime.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-3.7/netcdftime/_netcdftime.o -L/usr/local/lib -lpython3.7m -o build/lib.dragonfly-5.9-x86_64-3.7/netcdftime/_netcdftime.so running install_lib creating /construction/science/py-netCDF4/stage/usr/local/lib/python3.7 creating /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages creating /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netCDF4 copying build/lib.dragonfly-5.9-x86_64-3.7/netCDF4/_netCDF4.so -> /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netCDF4 copying build/lib.dragonfly-5.9-x86_64-3.7/netCDF4/utils.py -> /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netCDF4 copying build/lib.dragonfly-5.9-x86_64-3.7/netCDF4/__init__.py -> /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netCDF4 creating /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netcdftime copying build/lib.dragonfly-5.9-x86_64-3.7/netcdftime/_netcdftime.so -> /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netcdftime copying build/lib.dragonfly-5.9-x86_64-3.7/netcdftime/__init__.py -> /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netcdftime byte-compiling /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netCDF4/utils.py to utils.cpython-37.pyc byte-compiling /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netCDF4/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netcdftime/__init__.py to __init__.cpython-37.pyc writing byte-compilation script '/tmp/tmp0nb346b5.py' /usr/local/bin/python3.7 /tmp/tmp0nb346b5.py removing /tmp/tmp0nb346b5.py running install_egg_info running egg_info creating netCDF4.egg-info writing netCDF4.egg-info/PKG-INFO writing dependency_links to netCDF4.egg-info/dependency_links.txt writing entry points to netCDF4.egg-info/entry_points.txt writing requirements to netCDF4.egg-info/requires.txt writing top-level names to netCDF4.egg-info/top_level.txt writing manifest file 'netCDF4.egg-info/SOURCES.txt' reading manifest file 'netCDF4.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'netCDF4.egg-info/SOURCES.txt' Copying netCDF4.egg-info to /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netCDF4-1.3.1-py3.7.egg-info running install_scripts Installing nc3tonc4 script to /construction/science/py-netCDF4/stage/usr/local/bin Installing nc4tonc3 script to /construction/science/py-netCDF4/stage/usr/local/bin Installing ncinfo script to /construction/science/py-netCDF4/stage/usr/local/bin writing list of installed files to '/construction/science/py-netCDF4/.PLIST.pymodtmp' /usr/bin/strip /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netCDF4/_netCDF4.so /usr/bin/strip /construction/science/py-netCDF4/stage/usr/local/lib/python3.7/site-packages/netcdftime/_netcdftime.so (cd /construction/science/py-netCDF4/netcdf4-python-1.3.1rel/docs && /bin/sh -c '(/usr/bin/find -Ed $1 $3 | /usr/bin/cpio -dumpl $2 >/dev/null 2>&1) && /usr/bin/find -Ed $1 $3 \( -type d -exec /bin/sh -c '\''cd '\''$2'\'' && chmod 755 "$@"'\'' . {} + -o -type f -exec /bin/sh -c '\''cd '\''$2'\'' && chmod 0644 "$@"'\'' . {} + \)' COPYTREE_SHARE . /construction/science/py-netCDF4/stage/usr/local/share/doc/py37-netCDF4) (cd /construction/science/py-netCDF4/netcdf4-python-1.3.1rel/examples && install -m 0644 * /construction/science/py-netCDF4/stage/usr/local/share/examples/py37-netCDF4) ===> Creating unique files: Move MAN files needing SUFFIX ===> Creating unique files: Move files needing SUFFIX Move: bin/nc3tonc4 --> bin/nc3tonc4-3.7 Link: @bin/nc3tonc4 --> bin/nc3tonc4-3.7 Move: bin/nc4tonc3 --> bin/nc4tonc3-3.7 Link: @bin/nc4tonc3 --> bin/nc4tonc3-3.7 Move: bin/ncinfo --> bin/ncinfo-3.7 Link: @bin/ncinfo --> bin/ncinfo-3.7 ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Error: /usr/local/lib/python3.7/site-packages/netCDF4/_netCDF4.so is linked to /usr/local/lib/libcurl.so.4 from ftp/curl but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libcurl.so:ftp/curl Error: /usr/local/lib/python3.7/site-packages/netCDF4/_netCDF4.so is linked to /usr/local/lib/libsz.so.2 from science/szip but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libsz.so:science/szip Error: /usr/local/lib/python3.7/site-packages/netCDF4/_netCDF4.so is linked to /usr/local/lib/libintl.so.8 from devel/gettext-runtime but it is not declared as a dependency Warning: you need USES+=gettext-runtime Error: /usr/local/lib/python3.7/site-packages/netCDF4/_netCDF4.so is linked to /usr/local/lib/libnghttp2.so.14 from www/libnghttp2 but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libnghttp2.so:www/libnghttp2 Error: /usr/local/lib/python3.7/site-packages/netCDF4/_netCDF4.so is linked to /usr/local/lib/libssl.so.11 from security/openssl but it is not declared as a dependency Warning: you need USES=ssl Error: /usr/local/lib/python3.7/site-packages/netCDF4/_netCDF4.so is linked to /usr/local/lib/libcrypto.so.11 from security/openssl but it is not declared as a dependency Warning: you need USES=ssl Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:05:55 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for py37-netCDF4-1.3.1_7 file sizes/checksums [38]: 0% file sizes/checksums [38]: 100% packing files [38]: 0% packing files [38]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:05 TOTAL TIME 00:10:35