------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/perl5-5.30.1.txz pkg: Cannot runscript POST-INSTALL:Bad file descriptor ===== Message from perl5-5.30.1: -- The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. Installing /packages/All/p5-Math-VectorReal-1.02_1.txz Installing /packages/All/p5-Chemistry-Mol-0.37_1.txz Installing /packages/All/p5-Statistics-Regression-0.53_1.txz Installing /packages/All/p5-Chemistry-Ring-0.20_1.txz Installing /packages/All/p5-Chemistry-Pattern-0.27_1.txz Installing /packages/All/p5-Chemistry-Bond-Find-0.23_1.txz Installing /packages/All/p5-Chemistry-Canonicalize-0.11_1.txz Installing /packages/All/p5-Chemistry-File-SMILES-0.47_2.txz SUCCEEDED 00:00:04 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> p5-Chemistry-File-SMARTS-0.22_1 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> p5-Chemistry-File-SMARTS-0.22_1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by p5-Chemistry-File-SMARTS-0.22_1 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> p5-Chemistry-File-SMARTS-0.22_1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by p5-Chemistry-File-SMARTS-0.22_1 for building => SHA256 Checksum OK for Chemistry-File-SMARTS-0.22.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> p5-Chemistry-File-SMARTS-0.22_1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by p5-Chemistry-File-SMARTS-0.22_1 for building ===> Extracting for p5-Chemistry-File-SMARTS-0.22_1 => SHA256 Checksum OK for Chemistry-File-SMARTS-0.22.tar.gz. Extracted Memory Use: 0.26M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for p5-Chemistry-File-SMARTS-0.22_1 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-Mol>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-Ring>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-Pattern>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-File-SMILES>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: perl5>=5.30.r1<5.31 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-Mol>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-Ring>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-Pattern>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-File-SMILES>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: perl5>=5.30.r1<5.31 - found ===> Configuring for p5-Chemistry-File-SMARTS-0.22_1 Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Chemistry::File::SMARTS Writing MYMETA.yml and MYMETA.json SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for p5-Chemistry-File-SMARTS-0.22_1 --- blib/lib/Chemistry/File/.exists --- --- blib/arch/.exists --- --- blib/lib/auto/Chemistry/File/SMARTS/.exists --- --- blib/arch/auto/Chemistry/File/SMARTS/.exists --- --- blib/bin/.exists --- --- blib/script/.exists --- --- blib/man1/.exists --- --- blib/man3/.exists --- --- config --- --- subdirs --- --- dynamic --- --- pm_to_blib --- --- blibdirs --- --- config --- --- dynamic --- --- linkext --- --- pm_to_blib --- cp SMARTS.pm blib/lib/Chemistry/File/SMARTS.pm --- pure_all --- --- manifypods --- Manifying 1 pod document --- all --- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-Mol>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-Ring>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-Pattern>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-File-SMILES>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: perl5>=5.30.r1<5.31 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for p5-Chemistry-File-SMARTS-0.22_1 ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-Mol>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-Ring>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-Pattern>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: p5-Chemistry-File-SMILES>=0 - found ===> p5-Chemistry-File-SMARTS-0.22_1 depends on package: perl5>=5.30.r1<5.31 - found ===> Generating temporary packing list Manifying 1 pod document Installing /construction/science/p5-Chemistry-File-SMARTS/stage/usr/local/lib/perl5/site_perl/Chemistry/File/SMARTS.pm Installing /construction/science/p5-Chemistry-File-SMARTS/stage/usr/local/lib/perl5/site_perl/man/man3/Chemistry::File::SMARTS.3 ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Notice: You have some Perl modules as dependencies but you do not have devel/p5-Module-CoreList installed, the perlcore QA check gets better results when using it, especially with older Perl versions. Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:03 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for p5-Chemistry-File-SMARTS-0.22_1 file sizes/checksums [3]: 0% file sizes/checksums [3]: 100% packing files [3]: 0% packing files [3]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:00 TOTAL TIME 00:00:09