------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/indexinfo-0.3.1.tgz Installing /packages/All/gmp-6.1.2_1.tgz Installing /packages/All/mpfr-4.0.2.tgz Installing /packages/All/mpc-1.1.0_2.tgz Installing /packages/All/gettext-runtime-0.20.1.tgz Installing /packages/All/binutils-2.32_1,1.tgz Installing /packages/All/gcc8-8.3.0_3.tgz Message from gcc8-8.3.0_3: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/gmake-4.2.1_3.tgz Installing /packages/All/blas-3.5.0_6.tgz Installing /packages/All/fftw3-3.3.8_4.tgz Installing /packages/All/lapack-3.5.0_8.tgz Installing /packages/All/pciids-20190725.tgz Installing /packages/All/libpciaccess-0.16.tgz Installing /packages/All/libxml2-2.9.9.tgz Installing /packages/All/hwloc-1.11.11.tgz Installing /packages/All/mpich-3.2.1_5.tgz Message from mpich-3.2.1_5: ===> NOTICE: The mpich port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port SUCCEEDED 00:00:04 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- x===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Depends on expiring devel/openmp. It is scheduled to be removed on or after 2019-12-31. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- x===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Depends on expiring devel/openmp. It is scheduled to be removed on or after 2019-12-31. ===> Fetching all distfiles required by openmx-3.8.5_5 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- x===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Depends on expiring devel/openmp. It is scheduled to be removed on or after 2019-12-31. ===> Fetching all distfiles required by openmx-3.8.5_5 for building => SHA256 Checksum OK for openmx/openmx3.8.tar.gz. => SHA256 Checksum OK for openmx/patch3.8.5.tar.gz. SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- x===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Depends on expiring devel/openmp. It is scheduled to be removed on or after 2019-12-31. ===> Fetching all distfiles required by openmx-3.8.5_5 for building ===> Extracting for openmx-3.8.5_5 ===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Depends on expiring devel/openmp. It is scheduled to be removed on or after 2019-12-31. ===> Fetching all distfiles required by openmx-3.8.5_5 for building => SHA256 Checksum OK for openmx/openmx3.8.tar.gz. => SHA256 Checksum OK for openmx/patch3.8.5.tar.gz. Extracted Memory Use: 384.02M SUCCEEDED 00:00:04 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- x===> Patching for openmx-3.8.5_5 ===> Converting DOS text files to UNIX text files ===> Applying ports patches for openmx-3.8.5_5 /usr/bin/sed -i.bak -e 's@-liomp5@@g' /construction/science/openmx/openmx3.8/source/makefile SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- x SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- x===> Configuring for openmx-3.8.5_5 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- x===> Building for openmx-3.8.5_5 gmake[2]: Entering directory '/construction/science/openmx/openmx3.8/source' mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c openmx.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c openmx_common.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Input_std.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Inputtools.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c init.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c LU_inverse.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c ReLU_inverse.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c truncation.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c readfile.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c FT_PAO.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c FT_NLP.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c FT_ProExpn_VNA.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c FT_VNA.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c FT_ProductPAO.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Hamiltonian_Cluster.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Hamiltonian_Cluster_Hs.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Overlap_Cluster.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Hamiltonian_Band.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Overlap_Band.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Hamiltonian_Cluster_NC.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Hamiltonian_Band_NC.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Hamiltonian_Cluster_SO.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Get_OneD_HS_Col.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c SetPara_DFT.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c XC_Ceperly_Alder.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c XC_CA_LSDA.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c XC_PW92C.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c XC_PBE.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c XC_EX.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c DFT.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Mixing_DM.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Mixing_H.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Force.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Stress.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Poisson.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Poisson_ESM.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Cluster_DFT.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Cluster_DFT_ScaLAPACK.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Cluster_DFT_Dosout.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Cluster_DFT_ON2.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Band_DFT_Col.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Band_DFT_Col_ScaLAPACK.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Band_DFT_NonCol.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Band_DFT_kpath.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Band_DFT_MO.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Unfolding_Bands.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Band_DFT_Dosout.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Set_Density_Grid.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Set_Orbitals_Grid.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Set_Aden_Grid.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Gauss_Legendre.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c zero_cfrac.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c xyz2spherical.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c AngularF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c RadialF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Dr_RadialF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c PhiF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c VNAF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Dr_VNAF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c VH_AtomF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Dr_VH_AtomF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c RF_BesselF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c QuickSort.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Nonlocal_RadialF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c KumoF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Dr_KumoF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Mulliken_Charge.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Occupation_Number_LDA_U.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Eff_Hub_Pot.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c EulerAngle_Spin.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Smoothing_Func.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Orbital_Moment.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Pot_NeutralAtom.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Simple_Mixing_DM.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c DIIS_Mixing_DM.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c ADIIS_Mixing_DM.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c GR_Pulay_DM.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Kerker_Mixing_Rhok.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c DIIS_Mixing_Rhok.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Total_Energy.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Contract_Hamiltonian.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Contract_iHNL.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Cont_Matrix0.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Cont_Matrix1.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Cont_Matrix2.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Cont_Matrix3.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Cont_Matrix4.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Opt_Contraction.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Initial_CntCoes.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Initial_CntCoes2.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Set_XC_Grid.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Get_Orbitals.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Get_dOrbitals.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Get_Cnt_Orbitals.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Get_Cnt_dOrbitals.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Gaunt.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Find_CGrids.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c MD_pac.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c RestartFileDFT.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Output_CompTime.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Merge_LogFile.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Make_FracCoord.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Make_InputFile_with_FinalCoord.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Output_Energy_Decomposition.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Divide_Conquer.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Krylov.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c EC.c In file included from openmx_common.h:120, from EC.c:18: EC.c: In function 'EC_Col3': EC.c:628:16: warning: implicit declaration of function 'dgemm_'; did you mean 'dremf'? [-Wimplicit-function-declaration] F77_NAME(dgemm,DGEMM)("N", "T", &M, &N, &K, &alpha, ^~~~~ f77func.h:63:27: note: in definition of macro 'F77_NAME' #define F77_NAME(a,A) a ## _ ^ mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Divide_Conquer_Dosout.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Eigen_lapack.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Eigen_lapack2.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Eigen_lapack3.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c EigenBand_lapack.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Eigen_PReHH.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c BroadCast_ReMatrix.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Eigen_PHH.c In file included from openmx_common.h:120, from Eigen_PReHH.c:17: Eigen_PReHH.c: In function 'Eigen_ELPA1_Re': Eigen_PReHH.c:181:12: warning: implicit declaration of function 'solve_evp_real_' [-Wimplicit-function-declaration] F77_NAME(solve_evp_real,SOLVE_EVP_REAL)(&na, &nev, a, &na_rows, &ko[1], z, &na_rows, &nblk, &mpi_comm_rows_int, &mpi_comm_cols_int); ^~~~~~~~~~~~~~ f77func.h:63:27: note: in definition of macro 'F77_NAME' #define F77_NAME(a,A) a ## _ ^ In file included from openmx_common.h:120, from Eigen_PHH.c:17: Eigen_PHH.c: In function 'Eigen_ELPA1_Co': Eigen_PHH.c:163:12: warning: implicit declaration of function 'solve_evp_complex_' [-Wimplicit-function-declaration] F77_NAME(solve_evp_complex,SOLVE_EVP_COMPLEX)(&na, &nev, a, &na_rows, &ko[1], z, &na_rows, &nblk, &mpi_comm_rows_int, &mpi_comm_cols_int); ^~~~~~~~~~~~~~~~~ f77func.h:63:27: note: in definition of macro 'F77_NAME' #define F77_NAME(a,A) a ## _ ^ mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c BroadCast_ComplexMatrix.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c lapack_dstedc1.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c lapack_dstedc2.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c lapack_dstedc3.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c lapack_dstegr1.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c lapack_dstegr2.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c lapack_dstegr3.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c lapack_dstevx1.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c lapack_dstevx2.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c lapack_dstevx3.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c lapack_dstevx4.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c lapack_dstevx5.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c lapack_dsteqr1.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Nonlocal_Basis.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Set_OLP_Kin.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Set_Nonlocal.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Set_ProExpn_VNA.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Set_Hamiltonian.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Set_Vpot.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Voronoi_Charge.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Voronoi_Orbital_Moment.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Fuzzy_Weight.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c dampingF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c deri_dampingF.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Spherical_Bessel.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c iterout.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c iterout_md.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Allocate_Arrays.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Free_Arrays.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Init_List_YOUSO.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c outputfile1.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c malloc_multidimarray.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c PrintMemory.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c PrintMemory_Fix.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c dtime.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c OutData.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c OutData_Binary.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c init_alloc_first.c OutData_Binary.c: In function 'Print_CubeData': OutData_Binary.c:1860:3: warning: implicit declaration of function 'fsync' [-Wimplicit-function-declaration] fsync(fd); ^~~~~ mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c File_CntCoes.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c SCF2File.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c mimic_sse.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Make_Comm_Worlds.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Set_Allocate_Atom2CPU.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Cutoff.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Generating_MP_Special_Kpt.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Maketest.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Runtest.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Memory_Leak_test.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Force_test.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Stress_test.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Show_DFT_DATA.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Generate_Wannier.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Allocate.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_DFT.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_DFT_Dosout.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Apply_Bias2e.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Deallocate_Electrode_Grid.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Deallocate_RestartFile.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_RestartFile.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Calc_CentGreen.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Input_std.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Set_CentOverlap.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Calc_CentGreenLesser.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Input_std_Atoms.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Set_Electrode_Grid.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Calc_GridBound.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Set_IntegPath.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Output_HKS.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Set_MP.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Calc_SelfEnergy.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Output_Trans_HS.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Calc_Hopping_G.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Calc_SurfGreen.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Set_SurfOverlap.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Add_Density_Lead.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Add_ADensity_Lead.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Set_Value.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Poisson.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_adjust_Ngrid.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Print.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Print_Grid.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c Lapack_LU_inverse.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Distribute_Node.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Output_HKS_Write_Grid.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Credit.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Check_Region_Lead.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Check_Region.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Check_Input.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c DFTDvdW_init.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c DFTD3vdW_init.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c neb.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c neb_run.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c neb_check.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c cellopt.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Allocate_NC.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_DFT_NC.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Set_CentOverlap_NC.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Set_SurfOverlap_NC.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Calc_OneTransmission.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Main_Analysis.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Main_Analysis_NC.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c MTRAN_EigenChannel.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Channel_Functions.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Channel_Output.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_Calc_CurrentDensity.c TRAN_Channel_Output.c: In function 'Print_CubeCData_MO': TRAN_Channel_Output.c:127:7: warning: implicit declaration of function 'strcmp' [-Wimplicit-function-declaration] if (strcmp(op, "r") == 0) { cmd = 1; } ^~~~~~ TRAN_Channel_Output.c: At top level: TRAN_Channel_Output.c:400:1: warning: return type defaults to 'int' [-Wimplicit-int] TRAN_Output_ChannelCube( ^~~~~~~~~~~~~~~~~~~~~~~ TRAN_Channel_Output.c: In function 'TRAN_Output_ChannelCube': TRAN_Channel_Output.c:516:9: warning: implicit declaration of function 'fsync' [-Wimplicit-function-declaration] fsync(fd); ^~~~~ mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c TRAN_CDen_Main.c mpif90 -O -Wl,-rpath=/usr/local/lib/gcc8 -fopenmp -c elpa1.f90 mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c NBO_Cluster.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c NBO_Krylov.c TRAN_CDen_Main.c: In function 'TRAN_Current_OutPutCube': TRAN_CDen_Main.c:817:11: warning: implicit declaration of function 'fsync' [-Wimplicit-function-declaration] fsync(fd); ^~~~~ NBO_Krylov.c: In function 'Krylov_Col_NAO': NBO_Krylov.c:471:13: warning: implicit declaration of function 'omp_get_thread_num' [-Wimplicit-function-declaration] OMPID = omp_get_thread_num(); ^~~~~~~~~~~~~~~~~~ NBO_Krylov.c:472:14: warning: implicit declaration of function 'omp_get_num_threads' [-Wimplicit-function-declaration] Nthrds = omp_get_num_threads(); ^~~~~~~~~~~~~~~~~~~ NBO_Krylov.c:473:14: warning: implicit declaration of function 'omp_get_num_procs' [-Wimplicit-function-declaration] Nprocs = omp_get_num_procs(); ^~~~~~~~~~~~~~~~~ mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o exx.o exx.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o exx_index.o exx_index.c DFTD3vdW_init.c: In function 'DFTD3vdW_init': DFTD3vdW_init.c:33502:3: warning: implicit declaration of function 'memset' [-Wimplicit-function-declaration] memset( maxcn_dftD, -1, sizeof( maxcn_dftD) ); ^~~~~~ DFTD3vdW_init.c:33502:3: warning: incompatible implicit declaration of built-in function 'memset' DFTD3vdW_init.c:33502:3: note: include '' or provide a declaration of 'memset' DFTD3vdW_init.c:23:1: +#include DFTD3vdW_init.c:33502:3: memset( maxcn_dftD, -1, sizeof( maxcn_dftD) ); ^~~~~~ mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o exx_vector.o exx_vector.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o exx_log.o exx_log.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o exx_step1.o exx_step1.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o exx_step2.o exx_step2.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o exx_file_overlap.o exx_file_overlap.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o exx_file_eri.o exx_file_eri.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o exx_interface_openmx.o exx_interface_openmx.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o exx_debug.o exx_debug.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o exx_xc.o exx_xc.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o exx_rhox.o exx_rhox.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o liberi-091216/source/eri.o liberi-091216/source/eri.c liberi-091216/source/eri.c: In function 'ERI_Overlap': liberi-091216/source/eri.c:133:43: warning: passing argument 5 of 'ERI_LL_Overlap_d' from incompatible pointer type [-Wincompatible-pointer-types] ERI_LL_Overlap_d(solver, p, dp, alp1, dalp1, alp2, dalp2, cx); ^~~~~ In file included from liberi-091216/source/eri.c:14: liberi-091216/source/eri.h:532:17: note: expected 'const double **' but argument is of type 'double **' const double *da1[3], ~~~~~~~~~~~~~~^~~~~~ liberi-091216/source/eri.c:133:56: warning: passing argument 7 of 'ERI_LL_Overlap_d' from incompatible pointer type [-Wincompatible-pointer-types] ERI_LL_Overlap_d(solver, p, dp, alp1, dalp1, alp2, dalp2, cx); ^~~~~ In file included from liberi-091216/source/eri.c:14: liberi-091216/source/eri.h:534:17: note: expected 'const double **' but argument is of type 'double **' const double *da2[3], ~~~~~~~~~~~~~~^~~~~~ liberi-091216/source/eri.c: In function 'ERI_Integral': liberi-091216/source/eri.c:228:35: warning: passing argument 3 of 'ERI_Integral_GL_d' from incompatible pointer type [-Wincompatible-pointer-types] ERI_Integral_GL_d(solver, I4, dI4, glF, glG, dglF, dglG, ^~~ In file included from liberi-091216/source/eri.c:14: liberi-091216/source/eri.h:574:17: note: expected 'double (*)[3][2]' but argument is of type 'double *' double dI4[4][3][2], ~~~~~~~~~~~~~~^~~~~~~~~~~~ liberi-091216/source/eri.c:228:50: warning: passing argument 6 of 'ERI_Integral_GL_d' from incompatible pointer type [-Wincompatible-pointer-types] ERI_Integral_GL_d(solver, I4, dI4, glF, glG, dglF, dglG, ^~~~ In file included from liberi-091216/source/eri.c:14: liberi-091216/source/eri.h:577:17: note: expected 'const double **' but argument is of type 'double **' const double *dF1[3], /* (IN) Overlap matrix */ ~~~~~~~~~~~~~~^~~~~~ liberi-091216/source/eri.c:228:56: warning: passing argument 7 of 'ERI_Integral_GL_d' from incompatible pointer type [-Wincompatible-pointer-types] ERI_Integral_GL_d(solver, I4, dI4, glF, glG, dglF, dglG, ^~~~ In file included from liberi-091216/source/eri.c:14: liberi-091216/source/eri.h:578:17: note: expected 'const double **' but argument is of type 'double **' const double *dF2[3], /* (IN) */ ~~~~~~~~~~~~~~^~~~~~ mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o liberi-091216/source/eri_ll.o liberi-091216/source/eri_ll.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o liberi-091216/source/eri_sf.o liberi-091216/source/eri_sf.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o liberi-091216/source/eri_interpolate.o liberi-091216/source/eri_interpolate.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o liberi-091216/source/eri_gtbl.o liberi-091216/source/eri_gtbl.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o liberi-091216/source/sbt/eri_sbt.o liberi-091216/source/sbt/eri_sbt.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o liberi-091216/source/sbt/log/eri_fsbt.o liberi-091216/source/sbt/log/eri_fsbt.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o liberi-091216/source/sbt/log/eri_logfsbt.o liberi-091216/source/sbt/log/eri_logfsbt.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -c -o liberi-091216/source/sbt/linear/eri_linfsbt.o liberi-091216/source/sbt/linear/eri_linfsbt.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -o DosMain.o -c DosMain.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -o Tetrahedron_Blochl.o -c Tetrahedron_Blochl.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c jx.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c read_scfout.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c analysis_example.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -o esp.o -c esp.c mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source -c polB.c gcc bandgnu13.c -lm -o bandgnu13 gcc bin2txt.c -lm -o bin2txt gcc cube2xsf.c -lm -o cube2xsf gcc intensity_map.c -lm -o intensity_map gcc md2axsf.c -lm -o md2axsf mpif90 -O -Wl,-rpath=/usr/local/lib/gcc8 -fopenmp -c solve_evp_real.f90 mpif90 -O -Wl,-rpath=/usr/local/lib/gcc8 -fopenmp -c solve_evp_complex.f90 mpicc -pipe -Dkcomp -Dnosse -msse -msse2 -mfpmath=sse -O2 -isystem /usr/local/include -fno-strict-aliasing -fopenmp -I./liberi-091216/source analysis_example.o read_scfout.o /usr/local/lib/gcc9/libgcc_s.so /usr/local/lib/libmpifort.so -Wl,-rpath=/usr/local/lib/gcc8 -L/usr/local/lib/gcc8 -B/usr/local/bin -L/usr/local/lib -lpthread -llapack -lblas -lgfortran -lfftw3 -lm -o analysis_example cc: error: /usr/local/lib/gcc9/libgcc_s.so: No such file or directory gmake[2]: *** [makefile:710: analysis_example] Error 1 gmake[2]: *** Waiting for unfinished jobs.... NBO_Cluster.c: In function 'Calc_NAO_Cluster': NBO_Cluster.c:5583:21: warning: argument 1 range [18446744056529682440, 18446744073709551544] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] Table_NBO = (int**)malloc(sizeof(int*)*(atomnum*10+1)); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from NBO_Cluster.c:19: /usr/include/stdlib.h:102:7: note: in a call to allocation function 'malloc' declared here void *malloc(size_t) __malloclike __heedresult __alloc_size(1); ^~~~~~ gmake[2]: Leaving directory '/construction/science/openmx/openmx3.8/source' ===> Compilation failed unexpectedly. Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to the maintainer. *** Error code 1 Stop. make[1]: stopped in /xports/science/openmx *** Error code 1 Stop. make: stopped in /xports/science/openmx FAILED 00:00:37