------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/metis-5.1.0_8.txz Installing /packages/All/tbb-2020.1.txz Installing /packages/All/indexinfo-0.3.1.txz Installing /packages/All/gmp-6.2.0.txz Installing /packages/All/mpfr-4.0.2.txz Installing /packages/All/mpc-1.1.0_2.txz UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/gettext-runtime-0.20.1.txz Installing /packages/All/binutils-2.33.1_2,1.txz Installing /packages/All/gcc8-8.4.0.txz ===== Message from gcc8-8.4.0: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/openblas-0.3.7_2,1.txz Installing /packages/All/suitesparse-5.4.0_5.txz Installing /packages/All/expat-2.2.8.txz Installing /packages/All/libffi-3.2.1_3.txz Installing /packages/All/ncurses-6.1.20190525.txz Installing /packages/All/readline-8.0.4.txz Installing /packages/All/openssl-1.1.1d,1.txz Installing /packages/All/python27-2.7.17_1.txz ===== Message from python27-2.7.17_1: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter Installing /packages/All/py27-setuptools-44.0.0.txz ===== Message from py27-setuptools-44.0.0: -- Only /usr/local/bin/easy_install-2.7 script has been installed since Python 2.7 is not the default Python version. Installing /packages/All/py27-numpy-1.16.5_4,1.txz Installing /packages/All/gsl-2.6.txz UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:00:31 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> py27-pygsl-2.3.0_5 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> py27-pygsl-2.3.0_5 depends on file: /usr/local/sbin/pkg - found => pygsl-2.3.0.tar.gz doesn't seem to exist in /distfiles/. => Attempting to fetch https://downloads.sourceforge.net/project/pygsl/pygsl/pygsl-2.3.0/pygsl-2.3.0.tar.gz pygsl-2.3.0.tar.gz 0% of 1070 kB 0 Bps pygsl-2.3.0.tar.gz 1070 kB 1198 kBps 00s ===> Fetching all distfiles required by py27-pygsl-2.3.0_5 for building SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> py27-pygsl-2.3.0_5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py27-pygsl-2.3.0_5 for building => SHA256 Checksum OK for pygsl-2.3.0.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> py27-pygsl-2.3.0_5 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py27-pygsl-2.3.0_5 for building ===> Extracting for py27-pygsl-2.3.0_5 => SHA256 Checksum OK for pygsl-2.3.0.tar.gz. Extracted Memory Use: 9.37M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for py27-pygsl-2.3.0_5 ===> Applying ports patches for py27-pygsl-2.3.0_5 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> py27-pygsl-2.3.0_5 depends on package: py27-numpy>=1.15,1<1.19,1 - found ===> py27-pygsl-2.3.0_5 depends on package: py27-setuptools>0 - found ===> py27-pygsl-2.3.0_5 depends on file: /usr/local/bin/python2.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- ===> py27-pygsl-2.3.0_5 depends on shared library: libgsl.so - found (/usr/local/lib/libgsl.so) SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> py27-pygsl-2.3.0_5 depends on package: py27-numpy>=1.15,1<1.19,1 - found ===> py27-pygsl-2.3.0_5 depends on package: py27-setuptools>0 - found ===> py27-pygsl-2.3.0_5 depends on file: /usr/local/bin/python2.7 - found ===> py27-pygsl-2.3.0_5 depends on shared library: libgsl.so - found (/usr/local/lib/libgsl.so) ===> Configuring for py27-pygsl-2.3.0_5 /usr/local/lib/python2.7/site-packages/setuptools/version.py:1: UserWarning: Module errno was already imported from None, but /construction/math/py-pygsl/pygsl-2.3.0 is being added to sys.path import pkg_resources Bulding for '2.7.17 (default, Mar 17 2020, 10:15:41) [GCC 8.3 [DragonFly] Release/2019-02-22]' #0 extension modules running config compiling '_configtest.c': #include int main () { GSL_MAJOR_VERSION; } Warning: Can't read registry to find the necessary compiler setting Make sure that Python modules _winreg, win32api or win32con are installed. C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { GSL_MINOR_VERSION; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest cpp -I/usr/local/include -o _configtest.i _configtest.c removing: _configtest.c _configtest.i cpp -I/usr/local/include -o _configtest.i _configtest.c removing: _configtest.c _configtest.i cpp -I/usr/local/include -o _configtest.i _configtest.c removing: _configtest.c _configtest.i cpp -I/usr/local/include -o _configtest.i _configtest.c removing: _configtest.c _configtest.i compiling '_configtest.c': #include int main () { gsl_rng_knuthran2002; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_deriv_central; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_multifit_fdfsolver_lmniel; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_multifit_fdfsolver_jac; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { ((gsl_multifit_fdfsolver *) 0)->J; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c _configtest.c: In function 'main': _configtest.c:4:33: error: 'gsl_multifit_fdfsolver' {aka 'struct '} has no member named 'J' ((gsl_multifit_fdfsolver *) 0)->J; ^~ failure. removing: _configtest.c _configtest.o compiling '_configtest.c': #include int main () { ((gsl_multifit_linear_workspace *) 0)->nmax; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { ((gsl_multifit_linear_workspace *) 0)->pmax; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { ((gsl_multifit_linear_workspace *) 0)->n; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { ((gsl_multifit_linear_workspace *) 0)->p; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_multimin_fsolver; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c _configtest.c: In function 'main': _configtest.c:4:3: error: 'gsl_multimin_fsolver' undeclared (first use in this function); did you mean 'gsl_multimin_fminimizer'? gsl_multimin_fsolver; ^~~~~~~~~~~~~~~~~~~~ gsl_multimin_fminimizer _configtest.c:4:3: note: each undeclared identifier is reported only once for each function it appears in failure. removing: _configtest.c _configtest.o compiling '_configtest.c': #include int main () { gsl_multimin_fminimizer_nmsimplex; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_multimin_fminimizer_nmsimplex2; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_multimin_fminimizer_nmsimplex2rand; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_multimin_fdfminimizer_vector_bfgs2; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest cpp -I/usr/local/include -o _configtest.i _configtest.c removing: _configtest.c _configtest.i cpp -I/usr/local/include -o _configtest.i _configtest.c removing: _configtest.c _configtest.i cpp -I/usr/local/include -o _configtest.i _configtest.c removing: _configtest.c _configtest.i cpp -I/usr/local/include -o _configtest.i _configtest.c removing: _configtest.c _configtest.i compiling '_configtest.c': #include int main () { gsl_multifit_robust_type; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c _configtest.c: In function 'main': _configtest.c:4:3: warning: useless type name in empty declaration gsl_multifit_robust_type; ^~~~~~~~~~~~~~~~~~~~~~~~ cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_permutation_linear_to_canonical; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_permutation_canonical_to_linear; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_permutation_inversions; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_permutation_canonical_cycles; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_permutation_linear_cycles; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_permutation_mul; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_complex_householder_mh; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_hessenberg_decomp; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_hessenberg_unpack; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_hessenberg_unpack_accum; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_hessenberg_set_zero; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_hessenberg_submatrix; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_hessenberg; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c _configtest.c: In function 'main': _configtest.c:4:3: error: 'gsl_linalg_hessenberg' undeclared (first use in this function); did you mean 'gsl_linalg_tri_invert'? gsl_linalg_hessenberg; ^~~~~~~~~~~~~~~~~~~~~ gsl_linalg_tri_invert _configtest.c:4:3: note: each undeclared identifier is reported only once for each function it appears in failure. removing: _configtest.c _configtest.o compiling '_configtest.c': #include int main () { gsl_linalg_hesstri_decomp; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_SV_leverage; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_QR_QTmat; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_QR_matQ; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_cholesky_invert; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_complex_cholesky_decomp; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_complex_cholesky_solve; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_complex_cholesky_svx; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_complex_cholesky_invert; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_balance_matrix; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_linalg_balance_accum; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_eigen_francis_workspace; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c _configtest.c: In function 'main': _configtest.c:4:3: warning: useless type name in empty declaration gsl_eigen_francis_workspace; ^~~~~~~~~~~~~~~~~~~~~~~~~~~ cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_eigen_nonsymm_params; } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_sf_legendre_Plm_array(0, 0, 0.0, NULL); } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest compiling '_configtest.c': #include int main () { gsl_sf_legendre_sphPlm_array(0, 0, 0.0, NULL); } C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-I/usr/local/include -c' cc: _configtest.c cc _configtest.o -L/usr/local/lib -lgsl -lgslcblas -lm -o _configtest success! removing: _configtest.c _configtest.o _configtest SUCCEEDED 00:00:09 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for py27-pygsl-2.3.0_5 /usr/local/lib/python2.7/site-packages/setuptools/version.py:1: UserWarning: Module errno was already imported from None, but /construction/math/py-pygsl/pygsl-2.3.0 is being added to sys.path import pkg_resources Building testing ufuncs! Bulding for '2.7.17 (default, Mar 17 2020, 10:15:41) [GCC 8.3 [DragonFly] Release/2019-02-22]' #38 extension modules running build running build_py creating build creating build/lib.dragonfly-5.9-x86_64-2.7 creating build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/blas.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/block.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/bspline.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/chebyshev.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/combination.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/eigen.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/errors.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/fft.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/fit.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/gslwrap.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/gsl_function.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/hankel.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/integrate.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/interpolation.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/interpolation2d.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/interpolation2d_wrap.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/linalg.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/math.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/matrix_pierre.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/minimize.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/monte.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/multifit.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/multifit_nlin.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/multifit_robust.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/multiminimize.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/multiroots.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/odeiv.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/odeiv2.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/permutation.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/poly.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/qrng.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/roots.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/siman.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/spline.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/sum.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/vector.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/wavelet.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/_block.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/_callback.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/_generic_solver.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/_numobj.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/_poly.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/_version.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl copying pygsl/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl creating build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing copying pygsl/testing/complex.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing copying pygsl/testing/sf.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing copying pygsl/testing/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing creating build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics copying pygsl/statistics/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics creating build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist copying gsl_dist/array_includes.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist copying gsl_dist/gsl_CodeGenerator.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist copying gsl_dist/gsl_CodeGenerator2.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist copying gsl_dist/gsl_CodeGenerator3.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist copying gsl_dist/gsl_Config.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist copying gsl_dist/gsl_Extension.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist copying gsl_dist/gsl_Location.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist copying gsl_dist/gsl_site_example.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist copying gsl_dist/swig_extension.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist copying gsl_dist/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist copying gsl_dist/gsl_features.py -> build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist running build_ext building 'errno' extension Warning: Can't read registry to find the necessary compiler setting Make sure that Python modules _winreg, win32api or win32con are installed. C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating build/temp.dragonfly-5.9-x86_64-2.7 creating build/temp.dragonfly-5.9-x86_64-2.7/src creating build/temp.dragonfly-5.9-x86_64-2.7/src/init compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/init/errorno.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/init/errorno.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/errno.so building 'init' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/init/initmodule.c In file included from src/init/block_helpers.c:282, from src/init/initmodule.c:77: src/init/block_helpers_numpy.ic: In function 'PyGSL_numpy_convert': src/init/block_helpers_numpy.ic:122:6: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] DEBUG_MESS(8, "Char type %d", NPY_CHAR); ^~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from src/init/block_helpers.c:15, from src/init/initmodule.c:77: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/init/initmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/init.so building 'inittest' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/init/inittestmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/init/inittestmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/inittest.so building '_gslwrap' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating build/temp.dragonfly-5.9-x86_64-2.7/swig_src compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: swig_src/gslwrap_wrap.c In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/gslwrap_wrap.c:3087: ./typemaps/convert_block_description.h:163:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_vector_char_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/gslwrap_wrap.c:3086: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/gslwrap_wrap.c:3087: ./typemaps/convert_block_description.h:180:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_vector_char_view_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/gslwrap_wrap.c:3086: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/gslwrap_wrap.c:3087: ./typemaps/convert_block_description.h:446:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_matrix_char_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/gslwrap_wrap.c:3086: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/gslwrap_wrap.c:3087: ./typemaps/convert_block_description.h:463:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_matrix_char_view_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/gslwrap_wrap.c:3086: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ swig_src/gslwrap_wrap.c: In function 'SWIG_Python_addvarlink': swig_src/gslwrap_wrap.c:40862:9: warning: 'strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=] strncpy(gv->name,name,size); ^~~~~~~~~~~~~~~~~~~~~~~~~~~ swig_src/gslwrap_wrap.c:40859:21: note: length computed here size_t size = strlen(name)+1; ^~~~~~~~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/swig_src/gslwrap_wrap.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_gslwrap.so building '_hankel' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: swig_src/hankel_wrap.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/swig_src/hankel_wrap.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_hankel.so building '_sum' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: swig_src/sum_wrap.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/swig_src/sum_wrap.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_sum.so building '_bspline' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -Isrc/bspline -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: swig_src/bspline_wrap.c In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/bspline_wrap.c:3780: ./typemaps/convert_block_description.h:163:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_vector_char_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/bspline_wrap.c:3779: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/bspline_wrap.c:3780: ./typemaps/convert_block_description.h:180:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_vector_char_view_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/bspline_wrap.c:3779: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/bspline_wrap.c:3780: ./typemaps/convert_block_description.h:446:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_matrix_char_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/bspline_wrap.c:3779: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/bspline_wrap.c:3780: ./typemaps/convert_block_description.h:463:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_matrix_char_view_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/bspline_wrap.c:3779: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/swig_src/bspline_wrap.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_bspline.so building '_interpolation2d_wrap' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -Isrc/gslwrap -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: swig_src/interpolation2d_wrap_wrap.c In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/interpolation2d_wrap_wrap.c:3790: ./typemaps/convert_block_description.h:163:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_vector_char_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from swig_src/interpolation2d_wrap_wrap.c:3769: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/interpolation2d_wrap_wrap.c:3790: ./typemaps/convert_block_description.h:180:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_vector_char_view_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from swig_src/interpolation2d_wrap_wrap.c:3769: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/interpolation2d_wrap_wrap.c:3790: ./typemaps/convert_block_description.h:446:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_matrix_char_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from swig_src/interpolation2d_wrap_wrap.c:3769: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/interpolation2d_wrap_wrap.c:3790: ./typemaps/convert_block_description.h:463:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_matrix_char_view_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from swig_src/interpolation2d_wrap_wrap.c:3769: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ swig_src/interpolation2d_wrap_wrap.c: In function 'SWIG_Python_addvarlink': swig_src/interpolation2d_wrap_wrap.c:8895:9: warning: 'strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=] strncpy(gv->name,name,size); ^~~~~~~~~~~~~~~~~~~~~~~~~~~ swig_src/interpolation2d_wrap_wrap.c:8892:21: note: length computed here size_t size = strlen(name)+1; ^~~~~~~~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/swig_src/interpolation2d_wrap_wrap.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_interpolation2d_wrap.so building '_multifit_robust' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -Isrc/callback -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: swig_src/multifit_robust_wrap.c In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/multifit_robust_wrap.c:3780: ./typemaps/convert_block_description.h:163:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_vector_char_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/multifit_robust_wrap.c:3775: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/multifit_robust_wrap.c:3780: ./typemaps/convert_block_description.h:180:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_vector_char_view_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/multifit_robust_wrap.c:3775: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/multifit_robust_wrap.c:3780: ./typemaps/convert_block_description.h:446:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_matrix_char_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/multifit_robust_wrap.c:3775: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/multifit_robust_wrap.c:3780: ./typemaps/convert_block_description.h:463:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_matrix_char_view_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/multifit_robust_wrap.c:3775: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ swig_src/multifit_robust_wrap.c: In function 'SWIG_Python_addvarlink': swig_src/multifit_robust_wrap.c:6081:9: warning: 'strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=] strncpy(gv->name,name,size); ^~~~~~~~~~~~~~~~~~~~~~~~~~~ swig_src/multifit_robust_wrap.c:6078:21: note: length computed here size_t size = strlen(name)+1; ^~~~~~~~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/swig_src/multifit_robust_wrap.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_multifit_robust.so building '_odeiv2' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -Isrc/callback -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: swig_src/odeiv2_wrap.c swig_src/odeiv2_wrap.c: In function 'SWIG_Python_addvarlink': swig_src/odeiv2_wrap.c:8084:9: warning: 'strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=] strncpy(gv->name,name,size); ^~~~~~~~~~~~~~~~~~~~~~~~~~~ swig_src/odeiv2_wrap.c:8081:21: note: length computed here size_t size = strlen(name)+1; ^~~~~~~~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/swig_src/odeiv2_wrap.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_odeiv2.so building '__poly' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -Isrc/poly -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: swig_src/poly_wrap.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/swig_src/poly_wrap.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/__poly.so building '__block' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: swig_src/block_wrap.c In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/block_wrap.c:3870: ./typemaps/convert_block_description.h:163:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_vector_char_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/block_wrap.c:3869: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/block_wrap.c:3870: ./typemaps/convert_block_description.h:180:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_vector_char_view_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/block_wrap.c:3869: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/block_wrap.c:3870: ./typemaps/convert_block_description.h:446:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_matrix_char_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/block_wrap.c:3869: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/block_wrap.c:3870: ./typemaps/convert_block_description.h:463:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_matrix_char_view_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from swig_src/block_wrap.c:3869: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/swig_src/block_wrap.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/__block.so building '_siman' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/simanmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/simanmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_siman.so building 'const' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/constmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/constmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/const.so building '__callback' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -Isrc/callback -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: swig_src/callback_wrap.c In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/callback_wrap.c:3838: ./typemaps/convert_block_description.h:163:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_vector_char_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from Include/pygsl/function_helpers.h:33, from swig_src/callback_wrap.c:3818: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/callback_wrap.c:3838: ./typemaps/convert_block_description.h:180:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_vector_char_view_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from Include/pygsl/function_helpers.h:33, from swig_src/callback_wrap.c:3818: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/callback_wrap.c:3838: ./typemaps/convert_block_description.h:446:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_matrix_char_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from Include/pygsl/function_helpers.h:33, from swig_src/callback_wrap.c:3818: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ In file included from ./typemaps/block_conversion_functions.h:14, from swig_src/callback_wrap.c:3838: ./typemaps/convert_block_description.h:463:1: warning: 'NPY_CHAR' is deprecated: Use NPY_STRING [-Wdeprecated-declarations] gsl_matrix_char_view_py_array_type = NPY_CHAR , ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from Include/pygsl/block_helpers.h:79, from Include/pygsl/function_helpers.h:33, from swig_src/callback_wrap.c:3818: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"), ^~~~~~~~ swig_src/callback_wrap.c: In function 'SWIG_Python_addvarlink': swig_src/callback_wrap.c:17475:9: warning: 'strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=] strncpy(gv->name,name,size); ^~~~~~~~~~~~~~~~~~~~~~~~~~~ swig_src/callback_wrap.c:17472:21: note: length computed here size_t size = strlen(name)+1; ^~~~~~~~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/swig_src/callback_wrap.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/__callback.so building 'deriv' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/derivmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/derivmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/deriv.so building '_transform' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating build/temp.dragonfly-5.9-x86_64-2.7/src/transform compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/transform/transformmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/transform/transformmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_transform.so building 'rng' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating build/temp.dragonfly-5.9-x86_64-2.7/src/rng compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/rng/rngmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/rng/rngmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/rng.so building 'ieee' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/ieeemodule.c src/ieeemodule.c:169:135: warning: backslash and newline separated by space rounding : one of :py:data:`round_to_nearest` , :py:data:`round_down` , :py:data:`round_up` , :py:data:`round_to_zero` \n\ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/ieeemodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/ieee.so building '_qrng' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/qrng_module.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/qrng_module.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_qrng.so building 'statistics._stat' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating build/temp.dragonfly-5.9-x86_64-2.7/src/statistics compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/statistics/_statmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/statistics/_statmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/_stat.so building 'statistics.uchar' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/statistics/ucharmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/statistics/ucharmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/uchar.so building 'statistics.char' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/statistics/charmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/statistics/charmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/char.so building 'statistics.double' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/statistics/doublemodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/statistics/doublemodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/double.so building 'statistics.float' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/statistics/floatmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/statistics/floatmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/float.so building 'statistics.long' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/statistics/longmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/statistics/longmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/long.so building 'statistics.int' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/statistics/intmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/statistics/intmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/int.so building 'statistics.short' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/statistics/shortmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/statistics/shortmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/short.so building 'errortest' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/errortestmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/errortestmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/errortest.so building 'testing.solver' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating build/temp.dragonfly-5.9-x86_64-2.7/testing creating build/temp.dragonfly-5.9-x86_64-2.7/testing/src creating build/temp.dragonfly-5.9-x86_64-2.7/testing/src/solvers compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DONEFILE=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: testing/src/solvers/solvermodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/testing/src/solvers/solvermodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/solver.so building 'testing._ufuncs' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating build/temp.dragonfly-5.9-x86_64-2.7/testing/src/sf compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: testing/src/sf/sfmodule_testing.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/testing/src/sf/sfmodule_testing.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/_ufuncs.so building 'histogram' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating build/temp.dragonfly-5.9-x86_64-2.7/src/histogram compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/histogram/histogrammodule.c In file included from src/histogram/histogrammodule.c:192: src/histogram/histogram.ic:454:3: warning: initialization of 'Py_ssize_t (*)(PyObject *)' {aka 'long int (*)(struct _object *)'} from incompatible pointer type 'int (*)(PyObject *)' {aka 'int (*)(struct _object *)'} [-Wincompatible-pointer-types] (inquiry)histogram_histogram_mp_length, /* inquiry mp_length */ ^ src/histogram/histogram.ic:454:3: note: (near initialization for 'histogram_histogram_as_mapping.mp_length') In file included from src/histogram/histogrammodule.c:281: src/histogram/histogram2d.ic:562:3: warning: initialization of 'Py_ssize_t (*)(PyObject *)' {aka 'long int (*)(struct _object *)'} from incompatible pointer type 'int (*)(PyObject *)' {aka 'int (*)(struct _object *)'} [-Wincompatible-pointer-types] (inquiry)histogram_histogram2d_mp_length, /* inquiry mp_length */ ^ src/histogram/histogram2d.ic:562:3: note: (near initialization for 'histogram_histogram2d_as_mapping.mp_length') cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/histogram/histogrammodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/histogram.so building 'multimin' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: src/multiminmodule.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/multiminmodule.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/multimin.so building 'testing.multimin' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: testing/src/solvers/multimin.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/testing/src/solvers/multimin.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/multimin.so building 'testing.multiroot' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: testing/src/solvers/multiroot.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/testing/src/solvers/multiroot.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/multiroot.so building 'testing.minimize' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: testing/src/solvers/minimize.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/testing/src/solvers/minimize.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/minimize.so building 'testing.roots' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: testing/src/solvers/roots.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/testing/src/solvers/roots.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/roots.so building 'testing.odeiv' extension C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC compile options: '-DSWIG_COBJECT_TYPES=1 -DDEBUG=1 -DPyGSL_SET_GSL_ERROR_HANDLER=1 -DNUMERIC=0 -UNDEBUG -I/usr/local/include -IInclude -I. -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: testing/src/solvers/odeiv.c cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/testing/src/solvers/odeiv.o -L/usr/local/lib -L/usr/local/lib -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/odeiv.so SUCCEEDED 00:01:15 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> py27-pygsl-2.3.0_5 depends on package: py27-numpy>=1.15,1<1.19,1 - found ===> py27-pygsl-2.3.0_5 depends on package: py27-setuptools>0 - found ===> py27-pygsl-2.3.0_5 depends on file: /usr/local/bin/python2.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for py27-pygsl-2.3.0_5 ===> py27-pygsl-2.3.0_5 depends on package: py27-numpy>=1.15,1<1.19,1 - found ===> py27-pygsl-2.3.0_5 depends on package: py27-setuptools>0 - found ===> py27-pygsl-2.3.0_5 depends on file: /usr/local/bin/python2.7 - found ===> Generating temporary packing list /usr/local/lib/python2.7/site-packages/setuptools/version.py:1: UserWarning: Module errno was already imported from None, but /construction/math/py-pygsl/pygsl-2.3.0 is being added to sys.path import pkg_resources Building testing ufuncs! Bulding for '2.7.17 (default, Mar 17 2020, 10:15:41) [GCC 8.3 [DragonFly] Release/2019-02-22]' #38 extension modules running install running build running build_py running build_ext running install_lib creating /construction/math/py-pygsl/stage/usr/local/lib/python2.7 creating /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages creating /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/rng.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_gslwrap.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/eigen.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/fft.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_callback.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/block.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl creating /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/statistics copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/__init__.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/statistics copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/short.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/statistics copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/char.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/statistics copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/long.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/statistics copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/_stat.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/statistics copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/uchar.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/statistics copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/int.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/statistics copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/float.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/statistics copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/statistics/double.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/statistics copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/blas.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/errors.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_poly.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_interpolation2d_wrap.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/__init__.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/multifit_nlin.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/minimize.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_block.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/vector.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/wavelet.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/math.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/qrng.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_function.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/chebyshev.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_generic_solver.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/fit.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/bspline.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/combination.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/siman.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/monte.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/roots.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/multifit.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_numobj.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/multifit_robust.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/hankel.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/spline.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/permutation.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/linalg.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/multiminimize.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/interpolation2d_wrap.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/poly.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl creating /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/odeiv.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/complex.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/__init__.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/sf.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/minimize.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/multiroot.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/_ufuncs.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/roots.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/solver.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/testing/multimin.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/sum.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/odeiv.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/interpolation.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/multiroots.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/integrate.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gslwrap.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl creating /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist/gsl_Location.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist/swig_extension.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist/gsl_site_example.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist/gsl_features.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist/gsl_CodeGenerator3.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist/gsl_CodeGenerator2.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist/gsl_Extension.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist/gsl_CodeGenerator.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist/gsl_Config.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist/__init__.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/gsl_dist/array_includes.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/matrix_pierre.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_bspline.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/interpolation2d.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/odeiv2.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_version.py -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/__poly.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_transform.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/deriv.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/histogram.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_qrng.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/__block.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/__callback.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_siman.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/const.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/inittest.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/errno.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/init.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/multimin.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/errortest.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/ieee.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_sum.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_hankel.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_multifit_robust.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl copying build/lib.dragonfly-5.9-x86_64-2.7/pygsl/_odeiv2.so -> /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/eigen.py to eigen.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/fft.py to fft.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/_callback.py to _callback.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/block.py to block.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/statistics/__init__.py to __init__.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/blas.py to blas.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/errors.py to errors.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/_poly.py to _poly.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/__init__.py to __init__.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/multifit_nlin.py to multifit_nlin.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/minimize.py to minimize.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/_block.py to _block.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/vector.py to vector.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/wavelet.py to wavelet.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/math.py to math.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/qrng.py to qrng.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_function.py to gsl_function.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/chebyshev.py to chebyshev.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/_generic_solver.py to _generic_solver.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/fit.py to fit.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/bspline.py to bspline.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/combination.py to combination.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/siman.py to siman.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/monte.py to monte.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/roots.py to roots.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/multifit.py to multifit.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/_numobj.py to _numobj.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/multifit_robust.py to multifit_robust.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/hankel.py to hankel.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/spline.py to spline.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/permutation.py to permutation.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/linalg.py to linalg.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/multiminimize.py to multiminimize.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/interpolation2d_wrap.py to interpolation2d_wrap.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/poly.py to poly.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing/complex.py to complex.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing/__init__.py to __init__.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/testing/sf.py to sf.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/sum.py to sum.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/odeiv.py to odeiv.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/interpolation.py to interpolation.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/multiroots.py to multiroots.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/integrate.py to integrate.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gslwrap.py to gslwrap.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist/gsl_Location.py to gsl_Location.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist/swig_extension.py to swig_extension.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist/gsl_site_example.py to gsl_site_example.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist/gsl_features.py to gsl_features.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist/gsl_CodeGenerator3.py to gsl_CodeGenerator3.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist/gsl_CodeGenerator2.py to gsl_CodeGenerator2.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist/gsl_Extension.py to gsl_Extension.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist/gsl_CodeGenerator.py to gsl_CodeGenerator.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist/gsl_Config.py to gsl_Config.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist/__init__.py to __init__.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/gsl_dist/array_includes.py to array_includes.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/matrix_pierre.py to matrix_pierre.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/interpolation2d.py to interpolation2d.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/odeiv2.py to odeiv2.pyc byte-compiling /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl/_version.py to _version.pyc writing byte-compilation script '/tmp/tmpGy_yiU.py' /usr/local/bin/python2.7 -O /tmp/tmpGy_yiU.py removing /tmp/tmpGy_yiU.py running install_headers creating /construction/math/py-pygsl/stage/usr/local/include/python2.7 creating /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/pygsl_features_config.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/arrayobject.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/block_helpers.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/block_helpers_numpy.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/capsuletrunk.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/compilers.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/complex_helpers.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/errorno.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/error_helpers.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/function_helpers.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/general_helpers.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/intern.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/old_numpy_compat.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/profile.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/pygsl.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/pygsl_features.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/rng.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/rng_helpers.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/solver.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/string_helpers.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/transition.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl copying Include/pygsl/utils.h -> /construction/math/py-pygsl/stage/usr/local/include/python2.7/pygsl running install_egg_info running egg_info writing pygsl.egg-info/PKG-INFO writing top-level names to pygsl.egg-info/top_level.txt writing dependency_links to pygsl.egg-info/dependency_links.txt reading manifest file 'pygsl.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching 'src/fftmodule.c' warning: no previously-included files found matching 'src/histogrammodule.c' warning: no previously-included files found matching 'gsl_dist/gsl_site.py' warning: no previously-included files found matching 'pygsl/_mlab.py' warning: no previously-included files found matching 'Include/pygsl/block_helpers_numarray.h' warning: no previously-included files found matching 'Include/pygsl/block_helpers_numeric.h' warning: no previously-included files found matching 'src/init/block_helpers_numarray.ic' warning: no previously-included files found matching 'src/init/block_helpers_numeric.ic' warning: no files found matching '*.pdf' under directory 'doc' warning: no files found matching 'MANIFEST' writing manifest file 'pygsl.egg-info/SOURCES.txt' Copying pygsl.egg-info to /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages/pygsl-2.3.0-py2.7.egg-info running install_scripts writing list of installed files to '/construction/math/py-pygsl/.PLIST.pymodtmp' /usr/bin/find /construction/math/py-pygsl/stage/usr/local/lib/python2.7/site-packages -name '*.so' -exec /usr/bin/strip {} + ===> Creating unique files: Move MAN files needing SUFFIX ===> Creating unique files: Move files needing SUFFIX ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Error: /usr/local/lib/python2.7/site-packages/pygsl/__block.so is linked to /usr/local/lib/libintl.so.8 from devel/gettext-runtime but it is not declared as a dependency Warning: you need USES+=gettext-runtime Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:03 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for py27-pygsl-2.3.0_5 file sizes/checksums [241]: 0% file sizes/checksums [241]: 41% file sizes/checksums [241]: 82% file sizes/checksums [241]: 100% packing files [241]: 0% packing files [241]: 41% packing files [241]: 82% packing files [241]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:04 TOTAL TIME 00:02:06