------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/indexinfo-0.3.1.txz Installing /packages/All/gmp-6.2.0.txz pkg: Cannot runscript POST-INSTALL:Bad file descriptor Installing /packages/All/libxml2-2.9.10.txz pkg: Cannot runscript POST-INSTALL:Bad file descriptor Installing /packages/All/igraph-0.7.1.txz pkg: Cannot runscript POST-INSTALL:Bad file descriptor Installing /packages/All/expat-2.2.8.txz pkg: Cannot runscript POST-INSTALL:Bad file descriptor Installing /packages/All/libffi-3.2.1_3.txz pkg: Cannot runscript POST-INSTALL:Bad file descriptor Installing /packages/All/ncurses-6.1.20190525.txz pkg: Cannot runscript POST-INSTALL:Bad file descriptor Installing /packages/All/readline-8.0.4.txz pkg: Cannot runscript POST-INSTALL:Bad file descriptor Installing /packages/All/gettext-runtime-0.20.1.txz pkg: Cannot runscript POST-INSTALL:Bad file descriptor Installing /packages/All/openssl-1.1.1d,1.txz pkg: Cannot runscript POST-INSTALL:Bad file descriptor Installing /packages/All/python27-2.7.17_1.txz pkg: Cannot runscript POST-INSTALL:Bad file descriptor ===== Message from python27-2.7.17_1: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter Installing /packages/All/py27-setuptools-44.0.0.txz pkg: Cannot runscript POST-INSTALL:Bad file descriptor ===== Message from py27-setuptools-44.0.0: -- Only /usr/local/bin/easy_install-2.7 script has been installed since Python 2.7 is not the default Python version. SUCCEEDED 00:00:04 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> py27-igraph-0.7.0_2 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> py27-igraph-0.7.0_2 depends on file: /usr/local/sbin/pkg - found => python-igraph-0.7.0.tar.gz doesn't seem to exist in /distfiles/. => Attempting to fetch http://igraph.org/nightly/get/python/python-igraph-0.7.0.tar.gz python-igraph-0.7.0.tar.gz 0% of 360 kB 0 Bps python-igraph-0.7.0.tar.gz 360 kB 19 MBps 00s ===> Fetching all distfiles required by py27-igraph-0.7.0_2 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> py27-igraph-0.7.0_2 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py27-igraph-0.7.0_2 for building => SHA256 Checksum OK for python-igraph-0.7.0.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> py27-igraph-0.7.0_2 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py27-igraph-0.7.0_2 for building ===> Extracting for py27-igraph-0.7.0_2 => SHA256 Checksum OK for python-igraph-0.7.0.tar.gz. Extracted Memory Use: 2.08M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for py27-igraph-0.7.0_2 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> py27-igraph-0.7.0_2 depends on file: /usr/local/lib/libigraph.so - found ===> py27-igraph-0.7.0_2 depends on package: py27-setuptools>0 - found ===> py27-igraph-0.7.0_2 depends on file: /usr/local/bin/python2.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- ===> py27-igraph-0.7.0_2 depends on shared library: libxml2.so - found (/usr/local/lib/libxml2.so) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> py27-igraph-0.7.0_2 depends on file: /usr/local/lib/libigraph.so - found ===> py27-igraph-0.7.0_2 depends on package: py27-setuptools>0 - found ===> py27-igraph-0.7.0_2 depends on file: /usr/local/bin/python2.7 - found ===> py27-igraph-0.7.0_2 depends on shared library: libxml2.so - found (/usr/local/lib/libxml2.so) ===> Configuring for py27-igraph-0.7.0_2 running config SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for py27-igraph-0.7.0_2 running build running build_py creating build creating build/lib.dragonfly-5.9-x86_64-2.7 creating build/lib.dragonfly-5.9-x86_64-2.7/igraph copying igraph/utils.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph copying igraph/summary.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph copying igraph/formula.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph copying igraph/layout.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph copying igraph/datatypes.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph copying igraph/matching.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph copying igraph/statistics.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph copying igraph/cut.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph copying igraph/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph copying igraph/clustering.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph copying igraph/compat.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph copying igraph/configuration.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph creating build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/operators.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/vertexseq.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/iterators.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/utils.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/rng.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/matching.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/games.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/conversion.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/flow.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/indexing.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/attributes.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/homepage.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/isomorphism.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/cliques.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/basic.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/generators.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/foreign.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/edgeseq.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/decomposition.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/structural.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/colortests.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/bipartite.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/atlas.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/spectral.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/separators.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test copying igraph/test/layouts.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/test creating build/lib.dragonfly-5.9-x86_64-2.7/igraph/app copying igraph/app/shell.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/app copying igraph/app/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/app creating build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing copying igraph/drawing/shapes.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing copying igraph/drawing/colors.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing copying igraph/drawing/baseclasses.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing copying igraph/drawing/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing copying igraph/drawing/graph.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing copying igraph/drawing/vertex.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing copying igraph/drawing/text.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing copying igraph/drawing/utils.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing copying igraph/drawing/metamagic.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing copying igraph/drawing/edge.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing copying igraph/drawing/coord.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing creating build/lib.dragonfly-5.9-x86_64-2.7/igraph/remote copying igraph/remote/nexus.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/remote copying igraph/remote/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/remote copying igraph/remote/gephi.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/remote creating build/lib.dragonfly-5.9-x86_64-2.7/igraph/vendor copying igraph/vendor/texttable.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/vendor copying igraph/vendor/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/igraph/vendor running build_ext Cannot find the C core of igraph on this system using pkg-config. WARNING: we were not able to detect where igraph is installed on your machine (if it is installed at all). We will use the fallback library and include pathss hardcoded in setup.py and hope that the C core of igraph is installed there. If the compilation fails and you are sure that igraph is installed on your machine, adjust the following two variables in setup.py accordingly and try again: - LIBIGRAPH_FALLBACK_INCLUDE_DIRS - LIBIGRAPH_FALLBACK_LIBRARY_DIRS Continuing in 10 seconds; press Enter to continue immediately. Build type: dynamic extension Include path: /usr/include/igraph /usr/local/include/igraph Library path: Linked dynamic libraries: igraph Linked static libraries: Extra compiler options: Extra linker options: building 'igraph._igraph' extension creating build/temp.dragonfly-5.9-x86_64-2.7 creating build/temp.dragonfly-5.9-x86_64-2.7/src cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/arpackobject.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/arpackobject.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/vertexseqobject.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/vertexseqobject.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/vertexobject.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/vertexobject.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/edgeobject.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/edgeobject.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/py2compat.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/py2compat.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/indexing.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/indexing.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/filehandle.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/filehandle.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/pyhelpers.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/pyhelpers.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/error.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/error.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/random.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/random.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/graphobject.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/graphobject.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/convert.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/convert.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/edgeseqobject.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/edgeseqobject.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/igraphmodule.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/igraphmodule.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/common.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/common.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/bfsiter.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/bfsiter.o cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/include/igraph -I/usr/local/include/igraph -I../../build/include -I../../include -I/usr/local/include/igraph -I/usr/include/igraph -I/usr/local/include/python2.7 -c src/attributes.c -o build/temp.dragonfly-5.9-x86_64-2.7/src/attributes.o cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/src/arpackobject.o build/temp.dragonfly-5.9-x86_64-2.7/src/vertexseqobject.o build/temp.dragonfly-5.9-x86_64-2.7/src/vertexobject.o build/temp.dragonfly-5.9-x86_64-2.7/src/edgeobject.o build/temp.dragonfly-5.9-x86_64-2.7/src/py2compat.o build/temp.dragonfly-5.9-x86_64-2.7/src/indexing.o build/temp.dragonfly-5.9-x86_64-2.7/src/filehandle.o build/temp.dragonfly-5.9-x86_64-2.7/src/pyhelpers.o build/temp.dragonfly-5.9-x86_64-2.7/src/error.o build/temp.dragonfly-5.9-x86_64-2.7/src/random.o build/temp.dragonfly-5.9-x86_64-2.7/src/graphobject.o build/temp.dragonfly-5.9-x86_64-2.7/src/convert.o build/temp.dragonfly-5.9-x86_64-2.7/src/edgeseqobject.o build/temp.dragonfly-5.9-x86_64-2.7/src/igraphmodule.o build/temp.dragonfly-5.9-x86_64-2.7/src/common.o build/temp.dragonfly-5.9-x86_64-2.7/src/bfsiter.o build/temp.dragonfly-5.9-x86_64-2.7/src/attributes.o -L../../build/src/.libs -L../../src/.libs -L/usr/local/lib -L/usr/lib -L/usr/local/lib -ligraph -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/igraph/_igraph.so running build_scripts creating build/scripts-2.7 copying and adjusting scripts/igraph -> build/scripts-2.7 changing mode of build/scripts-2.7/igraph from 644 to 755 SUCCEEDED 00:00:16 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> py27-igraph-0.7.0_2 depends on package: py27-setuptools>0 - found ===> py27-igraph-0.7.0_2 depends on file: /usr/local/bin/python2.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for py27-igraph-0.7.0_2 ===> py27-igraph-0.7.0_2 depends on package: py27-setuptools>0 - found ===> py27-igraph-0.7.0_2 depends on file: /usr/local/bin/python2.7 - found ===> Generating temporary packing list running install running build running build_py running build_ext Cannot find the C core of igraph on this system using pkg-config. WARNING: we were not able to detect where igraph is installed on your machine (if it is installed at all). We will use the fallback library and include pathss hardcoded in setup.py and hope that the C core of igraph is installed there. If the compilation fails and you are sure that igraph is installed on your machine, adjust the following two variables in setup.py accordingly and try again: - LIBIGRAPH_FALLBACK_INCLUDE_DIRS - LIBIGRAPH_FALLBACK_LIBRARY_DIRS Continuing in 10 seconds; press Enter to continue immediately. Build type: dynamic extension Include path: /usr/include/igraph /usr/local/include/igraph Library path: Linked dynamic libraries: igraph Linked static libraries: Extra compiler options: Extra linker options: running build_scripts running install_lib creating /construction/math/py-igraph/stage/usr/local/lib/python2.7 creating /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages creating /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/layout.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/clustering.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph creating /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/vendor copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/vendor/__init__.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/vendor copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/vendor/texttable.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/vendor creating /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing/baseclasses.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing/edge.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing/shapes.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing/text.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing/metamagic.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing/__init__.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing/graph.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing/vertex.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing/coord.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing/utils.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/drawing/colors.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing creating /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/bipartite.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/homepage.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/colortests.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/utils.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/atlas.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/foreign.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/isomorphism.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/attributes.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/iterators.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/operators.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/separators.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/flow.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/basic.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/games.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/spectral.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/conversion.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/rng.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/__init__.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/vertexseq.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/layouts.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/edgeseq.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/generators.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/cliques.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/matching.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/indexing.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/structural.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/test/decomposition.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/utils.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/summary.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/configuration.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/formula.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/matching.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/statistics.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph creating /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/app copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/app/shell.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/app copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/app/__init__.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/app copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/datatypes.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/__init__.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph creating /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/remote copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/remote/gephi.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/remote copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/remote/__init__.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/remote copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/remote/nexus.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/remote copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/compat.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/cut.py -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph copying build/lib.dragonfly-5.9-x86_64-2.7/igraph/_igraph.so -> /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/layout.py to layout.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/clustering.py to clustering.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/vendor/__init__.py to __init__.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/vendor/texttable.py to texttable.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing/baseclasses.py to baseclasses.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing/edge.py to edge.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing/shapes.py to shapes.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing/text.py to text.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing/metamagic.py to metamagic.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing/__init__.py to __init__.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing/graph.py to graph.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing/vertex.py to vertex.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing/coord.py to coord.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing/utils.py to utils.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/drawing/colors.py to colors.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/bipartite.py to bipartite.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/homepage.py to homepage.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/colortests.py to colortests.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/utils.py to utils.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/atlas.py to atlas.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/foreign.py to foreign.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/isomorphism.py to isomorphism.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/attributes.py to attributes.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/iterators.py to iterators.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/operators.py to operators.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/separators.py to separators.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/flow.py to flow.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/basic.py to basic.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/games.py to games.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/spectral.py to spectral.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/conversion.py to conversion.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/rng.py to rng.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/__init__.py to __init__.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/vertexseq.py to vertexseq.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/layouts.py to layouts.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/edgeseq.py to edgeseq.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/generators.py to generators.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/cliques.py to cliques.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/matching.py to matching.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/indexing.py to indexing.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/structural.py to structural.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/test/decomposition.py to decomposition.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/utils.py to utils.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/summary.py to summary.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/configuration.py to configuration.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/formula.py to formula.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/matching.py to matching.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/statistics.py to statistics.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/app/shell.py to shell.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/app/__init__.py to __init__.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/datatypes.py to datatypes.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/__init__.py to __init__.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/remote/gephi.py to gephi.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/remote/__init__.py to __init__.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/remote/nexus.py to nexus.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/compat.py to compat.pyc byte-compiling /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/igraph/cut.py to cut.pyc writing byte-compilation script '/tmp/tmp5r6A1W.py' /usr/local/bin/python2.7 -O /tmp/tmp5r6A1W.py removing /tmp/tmp5r6A1W.py running install_headers creating /construction/math/py-igraph/stage/usr/local/include/python2.7 creating /construction/math/py-igraph/stage/usr/local/include/python2.7/python-igraph copying src/igraphmodule_api.h -> /construction/math/py-igraph/stage/usr/local/include/python2.7/python-igraph running install_egg_info running egg_info writing python_igraph.egg-info/PKG-INFO writing top-level names to python_igraph.egg-info/top_level.txt writing dependency_links to python_igraph.egg-info/dependency_links.txt reading manifest file 'python_igraph.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'python_igraph.egg-info/SOURCES.txt' Copying python_igraph.egg-info to /construction/math/py-igraph/stage/usr/local/lib/python2.7/site-packages/python_igraph-0.7.0-py2.7.egg-info running install_scripts copying build/scripts-2.7/igraph -> /construction/math/py-igraph/stage/usr/local/bin changing mode of /construction/math/py-igraph/stage/usr/local/bin/igraph to 755 writing list of installed files to '/construction/math/py-igraph/.PLIST.pymodtmp' ===> Creating unique files: Move MAN files needing SUFFIX ===> Creating unique files: Move files needing SUFFIX Move: bin/igraph --> bin/igraph-2.7 ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: 'lib/python2.7/site-packages/igraph/_igraph.so' is not stripped consider trying INSTALL_TARGET=install-strip or using ${STRIP_CMD} Error: /usr/local/lib/python2.7/site-packages/igraph/_igraph.so is linked to /usr/local/lib/libigraph.so.0 from math/igraph but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libigraph.so:math/igraph Error: /usr/local/lib/python2.7/site-packages/igraph/_igraph.so is linked to /usr/local/lib/libgmp.so.10 from math/gmp but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libgmp.so:math/gmp Error: /usr/local/lib/python2.7/site-packages/igraph/_igraph.so is linked to /usr/local/lib/libintl.so.8 from devel/gettext-runtime but it is not declared as a dependency Warning: you need USES+=gettext-runtime Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:02 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for py27-igraph-0.7.0_2 file sizes/checksums [178]: 0% file sizes/checksums [178]: 56% file sizes/checksums [178]: 100% packing files [178]: 0% packing files [178]: 56% packing files [178]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:03 TOTAL TIME 00:00:28