------------------------------------------------------------------------------- -- Phase: Environment ------------------------------------------------------------------------------- NO_DEPENDS=1 UNAME_r=5.9 UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=unknown UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 LANG=C HOME=/root USER=root TERM=dumb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: showconfig ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ENV ------------------------------------------------------------------------------- F77="gfortran8" FC="gfortran8" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc8" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc8" XDG_DATA_HOME=/construction/science/packmol XDG_CONFIG_HOME=/construction/science/packmol HOME=/construction/science/packmol TMPDIR="/tmp" PATH=/construction/science/packmol/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ARGS ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ENV ------------------------------------------------------------------------------- F77="gfortran8" FC="gfortran8" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc8" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc8" XDG_DATA_HOME=/construction/science/packmol XDG_CONFIG_HOME=/construction/science/packmol HOME=/construction/science/packmol TMPDIR="/tmp" PATH=/construction/science/packmol/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc8 -L/usr/local/lib/gcc8 -B/usr/local/bin " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ARGS ------------------------------------------------------------------------------- DESTDIR=/construction/science/packmol/stage SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: PLIST_SUB ------------------------------------------------------------------------------- CMAKE_BUILD_TYPE="release" OSREL=5.9 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/packmol" EXAMPLESDIR="share/examples/packmol" DATADIR="share/packmol" WWWDIR="www/packmol" ETCDIR="etc/packmol" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: SUB_LIST ------------------------------------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/packmol DOCSDIR=/usr/local/share/doc/packmol EXAMPLESDIR=/usr/local/share/examples/packmol WWWDIR=/usr/local/www/packmol ETCDIR=/usr/local/etc/packmol SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: /etc/make.conf ------------------------------------------------------------------------------- DPORTS_BUILDER=yes DISABLE_LICENSES=yes DEFAULT_VERSIONS=ssl=openssl FORCE_PACKAGE=yes DEVELOPER=yes USE_PACKAGE_DEPENDS_ONLY=yes PORTSDIR=/xports PORT_DBDIR=/options PKG_DBDIR=/var/db/pkg PKG_CACHEDIR=/var/cache/pkg PKG_SUFX=.txz DEVELOPER=1 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500906 OSVERSION=9999999 OSREL=5.9 _OSRELEASE=5.9-SYNTH DISTDIR=/distfiles WRKDIRPREFIX=/construction BATCH=yes PACKAGE_BUILDING=yes PKG_CREATE_VERBOSE=yes MAKE_JOBS_NUMBER=10 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/libnghttp2-1.42.0.txz Installing /packages/All/ca_root_nss-3.58.txz ===== Message from ca_root_nss-3.58: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem Installing /packages/All/openssl-1.1.1i,1.txz Installing /packages/All/curl-7.74.0.txz Installing /packages/All/expat-2.2.10.txz Installing /packages/All/libuv-1.40.0.txz Installing /packages/All/indexinfo-0.3.1.txz Installing /packages/All/gettext-runtime-0.21.txz Installing /packages/All/rhash-1.4.1.txz Installing /packages/All/liblz4-1.9.3,1.txz Installing /packages/All/libarchive-3.4.3_1,1.txz Installing /packages/All/ncurses-6.2.20210116.txz Installing /packages/All/cmake-3.19.2.txz Installing /packages/All/gmp-6.2.1.txz Installing /packages/All/mpfr-4.1.0.txz Installing /packages/All/mpc-1.1.0_2.txz UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/binutils-2.33.1_4,1.txz Installing /packages/All/gcc8-8.4.0.txz ===== Message from gcc8-8.4.0: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:00:22 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> packmol-18.169 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> packmol-18.169 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by packmol-18.169 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> packmol-18.169 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by packmol-18.169 for building => SHA256 Checksum OK for mcubeg-packmol-18.169_GH0.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> packmol-18.169 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by packmol-18.169 for building ===> Extracting for packmol-18.169 => SHA256 Checksum OK for mcubeg-packmol-18.169_GH0.tar.gz. Extracted Memory Use: 0.75M SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for packmol-18.169 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> packmol-18.169 depends on file: /usr/local/bin/cmake - found ===> packmol-18.169 depends on executable: gfortran8 - found ===> packmol-18.169 depends on file: /usr/local/bin/as - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> packmol-18.169 depends on file: /usr/local/bin/cmake - found ===> packmol-18.169 depends on executable: gfortran8 - found ===> packmol-18.169 depends on file: /usr/local/bin/as - found ===> Configuring for packmol-18.169 ===> Performing out-of-source build /bin/mkdir -p /construction/science/packmol/.build CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The Fortran compiler identification is GNU 8.4.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/local/bin/gfortran8 - skipped -- Checking whether /usr/local/bin/gfortran8 supports Fortran 90 -- Checking whether /usr/local/bin/gfortran8 supports Fortran 90 - yes -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_COMPILER CMAKE_CXX_FLAGS CMAKE_CXX_FLAGS_DEBUG CMAKE_CXX_FLAGS_RELEASE CMAKE_C_COMPILER CMAKE_C_FLAGS CMAKE_C_FLAGS_DEBUG CMAKE_C_FLAGS_RELEASE CMAKE_MODULE_LINKER_FLAGS CMAKE_SHARED_LINKER_FLAGS THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /construction/science/packmol/.build SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for packmol-18.169 /usr/local/bin/cmake -S/construction/science/packmol/packmol-18.169 -B/construction/science/packmol/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/science/packmol/.build/CMakeFiles /construction/science/packmol/.build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all --- CMakeFiles/packmol.dir/all --- /usr/bin/make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/depend --- CMakeFiles/packmol.dir/depend --- cd /construction/science/packmol/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/packmol/packmol-18.169 /construction/science/packmol/packmol-18.169 /construction/science/packmol/.build /construction/science/packmol/.build /construction/science/packmol/.build/CMakeFiles/packmol.dir/DependInfo.cmake Scanning dependencies of target packmol /usr/bin/make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/build --- CMakeFiles/packmol.dir/ahestetic.f90.o --- --- CMakeFiles/packmol.dir/sizes.f90.o --- --- CMakeFiles/packmol.dir/swaptypemod.f90.o --- --- CMakeFiles/packmol.dir/gencan.f.o --- --- CMakeFiles/packmol.dir/strlength.f90.o --- --- CMakeFiles/packmol.dir/setibox.f90.o --- --- CMakeFiles/packmol.dir/flashsort.f90.o --- --- CMakeFiles/packmol.dir/jacobi.f90.o --- --- CMakeFiles/packmol.dir/random.f90.o --- --- CMakeFiles/packmol.dir/gencan.f.o --- [ 5%] Building Fortran object CMakeFiles/packmol.dir/gencan.f.o --- CMakeFiles/packmol.dir/strlength.f90.o --- [ 5%] Building Fortran object CMakeFiles/packmol.dir/strlength.f90.o --- CMakeFiles/packmol.dir/ahestetic.f90.o --- [ 7%] Building Fortran object CMakeFiles/packmol.dir/ahestetic.f90.o --- CMakeFiles/packmol.dir/gencan.f.o --- /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/gencan.f -o CMakeFiles/packmol.dir/gencan.f.o --- CMakeFiles/packmol.dir/strlength.f90.o --- /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/strlength.f90 -o CMakeFiles/packmol.dir/strlength.f90.o --- CMakeFiles/packmol.dir/setibox.f90.o --- [ 10%] Building Fortran object CMakeFiles/packmol.dir/setibox.f90.o --- CMakeFiles/packmol.dir/ahestetic.f90.o --- /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/ahestetic.f90 -o CMakeFiles/packmol.dir/ahestetic.f90.o --- CMakeFiles/packmol.dir/setibox.f90.o --- /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/setibox.f90 -o CMakeFiles/packmol.dir/setibox.f90.o --- CMakeFiles/packmol.dir/swaptypemod.f90.o --- [ 13%] Building Fortran object CMakeFiles/packmol.dir/swaptypemod.f90.o --- CMakeFiles/packmol.dir/flashsort.f90.o --- [ 15%] Building Fortran object CMakeFiles/packmol.dir/flashsort.f90.o --- CMakeFiles/packmol.dir/swaptypemod.f90.o --- /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/swaptypemod.f90 -o CMakeFiles/packmol.dir/swaptypemod.f90.o --- CMakeFiles/packmol.dir/flashsort.f90.o --- /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/flashsort.f90 -o CMakeFiles/packmol.dir/flashsort.f90.o --- CMakeFiles/packmol.dir/sizes.f90.o --- [ 18%] Building Fortran object CMakeFiles/packmol.dir/sizes.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/sizes.f90 -o CMakeFiles/packmol.dir/sizes.f90.o --- CMakeFiles/packmol.dir/gencan.f.o --- f951: Warning: Nonconforming tab character in column 1 of line 2193 [-Wtabs] --- CMakeFiles/packmol.dir/sizes.mod.stamp --- /usr/local/bin/cmake -E cmake_copy_f90_mod sizes.mod CMakeFiles/packmol.dir/sizes.mod.stamp GNU --- CMakeFiles/packmol.dir/comparegrad.f90.o --- --- CMakeFiles/packmol.dir/compute_data.f90.o --- --- CMakeFiles/packmol.dir/flashmod.f90.o --- --- CMakeFiles/packmol.dir/input.f90.o --- --- CMakeFiles/packmol.dir/compute_data.f90.o --- [ 21%] Building Fortran object CMakeFiles/packmol.dir/compute_data.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/compute_data.f90 -o CMakeFiles/packmol.dir/compute_data.f90.o --- CMakeFiles/packmol.dir/comparegrad.f90.o --- [ 23%] Building Fortran object CMakeFiles/packmol.dir/comparegrad.f90.o --- CMakeFiles/packmol.dir/input.f90.o --- [ 26%] Building Fortran object CMakeFiles/packmol.dir/input.f90.o --- CMakeFiles/packmol.dir/comparegrad.f90.o --- /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/comparegrad.f90 -o CMakeFiles/packmol.dir/comparegrad.f90.o --- CMakeFiles/packmol.dir/input.f90.o --- /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/input.f90 -o CMakeFiles/packmol.dir/input.f90.o --- CMakeFiles/packmol.dir/sizes.f90.o.provides.build --- --- CMakeFiles/packmol.dir/flashmod.f90.o --- [ 28%] Building Fortran object CMakeFiles/packmol.dir/flashmod.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/flashmod.f90 -o CMakeFiles/packmol.dir/flashmod.f90.o --- CMakeFiles/packmol.dir/sizes.f90.o.provides.build --- /usr/local/bin/cmake -E touch CMakeFiles/packmol.dir/sizes.f90.o.provides.build --- CMakeFiles/packmol.dir/usegencan.f90.o --- --- CMakeFiles/packmol.dir/jacobi.f90.o --- [ 31%] Building Fortran object CMakeFiles/packmol.dir/jacobi.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/jacobi.f90 -o CMakeFiles/packmol.dir/jacobi.f90.o --- CMakeFiles/packmol.dir/random.f90.o --- [ 34%] Building Fortran object CMakeFiles/packmol.dir/random.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/random.f90 -o CMakeFiles/packmol.dir/random.f90.o --- CMakeFiles/packmol.dir/usegencan.f90.o --- [ 36%] Building Fortran object CMakeFiles/packmol.dir/usegencan.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/usegencan.f90 -o CMakeFiles/packmol.dir/usegencan.f90.o --- CMakeFiles/packmol.dir/ahestetic.mod.stamp --- /usr/local/bin/cmake -E cmake_copy_f90_mod ahestetic.mod CMakeFiles/packmol.dir/ahestetic.mod.stamp GNU --- CMakeFiles/packmol.dir/gencan.f.o --- /construction/science/packmol/packmol-18.169/gencan.f:2574:5: 1003 format(6X,I6,T22,D17.6,T43,D17.6) 1 Warning: Label 1003 at (1) defined but not used [-Wunused-label] /construction/science/packmol/packmol-18.169/gencan.f:5662:5: 110 IF (DABS(DX(I)).LE.XMAX) GO TO 115 1 Warning: Label 110 at (1) defined but not used [-Wunused-label] /construction/science/packmol/packmol-18.169/gencan.f:5661:5: 70 IF (DABS(DX(I)).GT.CUTLO) GO TO 75 1 Warning: Label 70 at (1) defined but not used [-Wunused-label] /construction/science/packmol/packmol-18.169/gencan.f:5654:5: 50 IF (DX(I).EQ.ZERO) GO TO 200 1 Warning: Label 50 at (1) defined but not used [-Wunused-label] /construction/science/packmol/packmol-18.169/gencan.f:5652:5: 30 IF (DABS(DX(I)).GT.CUTLO) GO TO 85 1 Warning: Label 30 at (1) defined but not used [-Wunused-label] --- CMakeFiles/packmol.dir/swaptypemod.mod.stamp --- /usr/local/bin/cmake -E cmake_copy_f90_mod swaptypemod.mod CMakeFiles/packmol.dir/swaptypemod.mod.stamp GNU --- CMakeFiles/packmol.dir/compute_data.mod.stamp --- /usr/local/bin/cmake -E cmake_copy_f90_mod compute_data.mod CMakeFiles/packmol.dir/compute_data.mod.stamp GNU --- CMakeFiles/packmol.dir/gencan.f.o --- /construction/science/packmol/packmol-18.169/gencan.f:62:37: subroutine evalnal(n,x,m,lambda,rho,g,flag) 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:62:41: subroutine evalnal(n,x,m,lambda,rho,g,flag) 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:2585:40: +steabs,epsrel,epsabs,infrel,infabs) 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:2585:33: +steabs,epsrel,epsabs,infrel,infabs) 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:2585:12: +steabs,epsrel,epsabs,infrel,infabs) 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:2584:71: +fmin,maxfc,iprint,fcnt,inform,xtrial,d,gamma,sigma1,sigma2,sterel, 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:3819:61: +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:3819:54: +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:4:36: subroutine evalal(n,x,m,lambda,rho,f,flag) 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:4:40: subroutine evalal(n,x,m,lambda,rho,f,flag) 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] --- CMakeFiles/packmol.dir/ahestetic.f90.o.provides.build --- --- CMakeFiles/packmol.dir/gencan.f.o --- /construction/science/packmol/packmol-18.169/gencan.f:2981:19: +epsabs,infrel,infabs) 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] --- CMakeFiles/packmol.dir/title.f90.o --- --- CMakeFiles/packmol.dir/ahestetic.f90.o.provides.build --- /usr/local/bin/cmake -E touch CMakeFiles/packmol.dir/ahestetic.f90.o.provides.build --- CMakeFiles/packmol.dir/gencan.f.o --- /construction/science/packmol/packmol-18.169/gencan.f:5179:19: +steabs,inform) 1 Warning: Unused dummy argument 'inform' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:5178:52: subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:5178:56: subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:5179:12: +steabs,inform) 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:5178:71: subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:5178:64: subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, 1 Warning: Unused dummy argument 'xtmp' at (1) [-Wunused-dummy-argument] /construction/science/packmol/packmol-18.169/gencan.f:125:25: subroutine evalhd(n) 1 Warning: Unused dummy argument 'n' at (1) [-Wunused-dummy-argument] --- CMakeFiles/packmol.dir/comprest.f90.o --- --- CMakeFiles/packmol.dir/compute_data.f90.o.provides.build --- --- CMakeFiles/packmol.dir/title.f90.o --- [ 39%] Building Fortran object CMakeFiles/packmol.dir/title.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/title.f90 -o CMakeFiles/packmol.dir/title.f90.o --- CMakeFiles/packmol.dir/fparc.f90.o --- --- CMakeFiles/packmol.dir/compute_data.f90.o.provides.build --- /usr/local/bin/cmake -E touch CMakeFiles/packmol.dir/compute_data.f90.o.provides.build --- CMakeFiles/packmol.dir/comprest.f90.o --- [ 42%] Building Fortran object CMakeFiles/packmol.dir/comprest.f90.o --- CMakeFiles/packmol.dir/fparc.f90.o --- [ 44%] Building Fortran object CMakeFiles/packmol.dir/fparc.f90.o --- CMakeFiles/packmol.dir/comprest.f90.o --- /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/comprest.f90 -o CMakeFiles/packmol.dir/comprest.f90.o --- CMakeFiles/packmol.dir/gparc.f90.o --- --- CMakeFiles/packmol.dir/fparc.f90.o --- /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/fparc.f90 -o CMakeFiles/packmol.dir/fparc.f90.o --- CMakeFiles/packmol.dir/gwalls.f90.o --- --- CMakeFiles/packmol.dir/gparc.f90.o --- [ 47%] Building Fortran object CMakeFiles/packmol.dir/gparc.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/gparc.f90 -o CMakeFiles/packmol.dir/gparc.f90.o --- CMakeFiles/packmol.dir/gwalls.f90.o --- [ 50%] Building Fortran object CMakeFiles/packmol.dir/gwalls.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/gwalls.f90 -o CMakeFiles/packmol.dir/gwalls.f90.o --- CMakeFiles/packmol.dir/polartocart.f90.o --- --- CMakeFiles/packmol.dir/resetboxes.f90.o --- --- CMakeFiles/packmol.dir/setijk.f90.o --- --- CMakeFiles/packmol.dir/polartocart.f90.o --- [ 52%] Building Fortran object CMakeFiles/packmol.dir/polartocart.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/polartocart.f90 -o CMakeFiles/packmol.dir/polartocart.f90.o --- CMakeFiles/packmol.dir/resetboxes.f90.o --- [ 55%] Building Fortran object CMakeFiles/packmol.dir/resetboxes.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/resetboxes.f90 -o CMakeFiles/packmol.dir/resetboxes.f90.o --- CMakeFiles/packmol.dir/setijk.f90.o --- [ 57%] Building Fortran object CMakeFiles/packmol.dir/setijk.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/setijk.f90 -o CMakeFiles/packmol.dir/setijk.f90.o --- CMakeFiles/packmol.dir/tobar.f90.o --- --- CMakeFiles/packmol.dir/swaptypemod.f90.o.provides.build --- /usr/local/bin/cmake -E touch CMakeFiles/packmol.dir/swaptypemod.f90.o.provides.build --- CMakeFiles/packmol.dir/tobar.f90.o --- [ 60%] Building Fortran object CMakeFiles/packmol.dir/tobar.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/tobar.f90 -o CMakeFiles/packmol.dir/tobar.f90.o --- CMakeFiles/packmol.dir/usegencan.mod.stamp --- --- CMakeFiles/packmol.dir/flashsort.mod.stamp --- --- CMakeFiles/packmol.dir/usegencan.mod.stamp --- /usr/local/bin/cmake -E cmake_copy_f90_mod usegencan.mod CMakeFiles/packmol.dir/usegencan.mod.stamp GNU --- CMakeFiles/packmol.dir/input.mod.stamp --- --- CMakeFiles/packmol.dir/flashsort.mod.stamp --- /usr/local/bin/cmake -E cmake_copy_f90_mod flashsort.mod CMakeFiles/packmol.dir/flashsort.mod.stamp GNU --- CMakeFiles/packmol.dir/input.mod.stamp --- /usr/local/bin/cmake -E cmake_copy_f90_mod input.mod CMakeFiles/packmol.dir/input.mod.stamp GNU --- CMakeFiles/packmol.dir/flashmod.f90.o.provides.build --- --- CMakeFiles/packmol.dir/restmol.f90.o --- --- CMakeFiles/packmol.dir/usegencan.f90.o.provides.build --- --- CMakeFiles/packmol.dir/flashmod.f90.o.provides.build --- /usr/local/bin/cmake -E touch CMakeFiles/packmol.dir/flashmod.f90.o.provides.build --- CMakeFiles/packmol.dir/usegencan.f90.o.provides.build --- /usr/local/bin/cmake -E touch CMakeFiles/packmol.dir/usegencan.f90.o.provides.build --- CMakeFiles/packmol.dir/cenmass.f90.o --- --- CMakeFiles/packmol.dir/checkpoint.f90.o --- --- CMakeFiles/packmol.dir/computef.f90.o --- --- CMakeFiles/packmol.dir/restmol.f90.o --- [ 63%] Building Fortran object CMakeFiles/packmol.dir/restmol.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/restmol.f90 -o CMakeFiles/packmol.dir/restmol.f90.o --- CMakeFiles/packmol.dir/checkpoint.f90.o --- [ 65%] Building Fortran object CMakeFiles/packmol.dir/checkpoint.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/checkpoint.f90 -o CMakeFiles/packmol.dir/checkpoint.f90.o --- CMakeFiles/packmol.dir/computef.f90.o --- [ 68%] Building Fortran object CMakeFiles/packmol.dir/computef.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/computef.f90 -o CMakeFiles/packmol.dir/computef.f90.o --- CMakeFiles/packmol.dir/computeg.f90.o --- --- CMakeFiles/packmol.dir/cenmass.f90.o --- [ 71%] Building Fortran object CMakeFiles/packmol.dir/cenmass.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/cenmass.f90 -o CMakeFiles/packmol.dir/cenmass.f90.o --- CMakeFiles/packmol.dir/computeg.f90.o --- [ 73%] Building Fortran object CMakeFiles/packmol.dir/computeg.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/computeg.f90 -o CMakeFiles/packmol.dir/computeg.f90.o --- CMakeFiles/packmol.dir/getinp.f90.o --- [ 76%] Building Fortran object CMakeFiles/packmol.dir/getinp.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/getinp.f90 -o CMakeFiles/packmol.dir/getinp.f90.o --- CMakeFiles/packmol.dir/heuristics.f90.o --- [ 78%] Building Fortran object CMakeFiles/packmol.dir/heuristics.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/heuristics.f90 -o CMakeFiles/packmol.dir/heuristics.f90.o --- CMakeFiles/packmol.dir/initial.f90.o --- --- CMakeFiles/packmol.dir/input.f90.o.provides.build --- /usr/local/bin/cmake -E touch CMakeFiles/packmol.dir/input.f90.o.provides.build --- CMakeFiles/packmol.dir/output.f90.o --- --- CMakeFiles/packmol.dir/packmol.f90.o --- --- CMakeFiles/packmol.dir/output.f90.o --- [ 81%] Building Fortran object CMakeFiles/packmol.dir/output.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/output.f90 -o CMakeFiles/packmol.dir/output.f90.o --- CMakeFiles/packmol.dir/initial.f90.o --- [ 84%] Building Fortran object CMakeFiles/packmol.dir/initial.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/initial.f90 -o CMakeFiles/packmol.dir/initial.f90.o --- CMakeFiles/packmol.dir/packmol.f90.o --- [ 86%] Building Fortran object CMakeFiles/packmol.dir/packmol.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/packmol.f90 -o CMakeFiles/packmol.dir/packmol.f90.o --- CMakeFiles/packmol.dir/pgencan.f90.o --- [ 89%] Building Fortran object CMakeFiles/packmol.dir/pgencan.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/pgencan.f90 -o CMakeFiles/packmol.dir/pgencan.f90.o --- CMakeFiles/packmol.dir/setsizes.f90.o --- [ 92%] Building Fortran object CMakeFiles/packmol.dir/setsizes.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/setsizes.f90 -o CMakeFiles/packmol.dir/setsizes.f90.o --- CMakeFiles/packmol.dir/swaptype.f90.o --- [ 94%] Building Fortran object CMakeFiles/packmol.dir/swaptype.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/swaptype.f90 -o CMakeFiles/packmol.dir/swaptype.f90.o --- CMakeFiles/packmol.dir/writesuccess.f90.o --- [ 97%] Building Fortran object CMakeFiles/packmol.dir/writesuccess.f90.o /usr/local/bin/gfortran8 -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall -c /construction/science/packmol/packmol-18.169/writesuccess.f90 -o CMakeFiles/packmol.dir/writesuccess.f90.o --- CMakeFiles/packmol.dir/getinp.f90.o --- /construction/science/packmol/packmol-18.169/getinp.f90:863:0: if(ires.ne.ireslast) then Warning: 'ireslast' may be used uninitialized in this function [-Wmaybe-uninitialized] --- CMakeFiles/packmol.dir/output.f90.o --- /construction/science/packmol/packmol-18.169/output.f90:420:0: nres = ilres - ifres + 1 Warning: 'ilres' may be used uninitialized in this function [-Wmaybe-uninitialized] --- CMakeFiles/packmol.dir/packmol.f90.o --- /construction/science/packmol/packmol-18.169/packmol.f90:806:0: if(flast.gt.0.d0) fimp = -100.d0 * (fx - flast) / flast Warning: 'flast' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/packmol.f90:321:0: iratom(icart,iratcount) = iirest Warning: 'iirest' may be used uninitialized in this function [-Wmaybe-uninitialized] --- CMakeFiles/packmol.dir/gencan.f.o --- /construction/science/packmol/packmol-18.169/gencan.f:3346:0: beta = rnorm2 / rnorm2prev Warning: 'rnorm2prev' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/gencan.f:3644:0: rbdtype = rbdposatype Warning: 'rbdposatype' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/gencan.f:3643:0: rbdind = rbdposaind Warning: 'rbdposaind' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/gencan.f:3647:0: rbdtype = rbdnegatype Warning: 'rbdnegatype' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/gencan.f:3646:0: rbdind = rbdnegaind Warning: 'rbdnegaind' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/gencan.f:3353:0: + beta ** 2 * dnorm2 Warning: 'dtw' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/gencan.f:3353:0: Warning: 'dtr' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/gencan.f:3353:0: Warning: 'dnorm2' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/gencan.f:3495:0: amaxn = max( amax1n, amax2n ) Warning: 'amax1n' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/gencan.f:3494:0: amax = min( amax1 , amax2 ) Warning: 'amax1' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/gencan.f:3353:0: + beta ** 2 * dnorm2 Warning: 'alpha' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/gencan.f:2307:0: lamspg = sts / sty Warning: 'sty' may be used uninitialized in this function [-Wmaybe-uninitialized] /construction/science/packmol/packmol-18.169/gencan.f:2137:0: delta = max( delmin, 10.0d0 * sqrt( sts ) ) Warning: 'sts' may be used uninitialized in this function [-Wmaybe-uninitialized] --- packmol --- [100%] Linking Fortran executable packmol /usr/local/bin/cmake -E cmake_link_script CMakeFiles/packmol.dir/link.txt --verbose=1 /usr/local/bin/gfortran8 -Wl,-rpath=/usr/local/lib/gcc8 -L/usr/local/lib/gcc8 -B/usr/local/bin -O -Wl,-rpath=/usr/local/lib/gcc8 -Wall CMakeFiles/packmol.dir/cenmass.f90.o CMakeFiles/packmol.dir/gencan.f.o CMakeFiles/packmol.dir/pgencan.f90.o CMakeFiles/packmol.dir/initial.f90.o CMakeFiles/packmol.dir/title.f90.o CMakeFiles/packmol.dir/setsizes.f90.o CMakeFiles/packmol.dir/getinp.f90.o CMakeFiles/packmol.dir/strlength.f90.o CMakeFiles/packmol.dir/output.f90.o CMakeFiles/packmol.dir/checkpoint.f90.o CMakeFiles/packmol.dir/writesuccess.f90.o CMakeFiles/packmol.dir/fparc.f90.o CMakeFiles/packmol.dir/gparc.f90.o CMakeFiles/packmol.dir/gwalls.f90.o CMakeFiles/packmol.dir/comprest.f90.o CMakeFiles/packmol.dir/comparegrad.f90.o CMakeFiles/packmol.dir/packmol.f90.o CMakeFiles/packmol.dir/polartocart.f90.o CMakeFiles/packmol.dir/resetboxes.f90.o CMakeFiles/packmol.dir/tobar.f90.o CMakeFiles/packmol.dir/setijk.f90.o CMakeFiles/packmol.dir/setibox.f90.o 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------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for packmol-18.169 ===> packmol-18.169 depends on executable: gfortran8 - found ===> Generating temporary packing list /usr/local/bin/cmake -S/construction/science/packmol/packmol-18.169 -B/construction/science/packmol/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/science/packmol/.build/CMakeFiles /construction/science/packmol/.build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/depend cd /construction/science/packmol/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/packmol/packmol-18.169 /construction/science/packmol/packmol-18.169 /construction/science/packmol/.build /construction/science/packmol/.build /construction/science/packmol/.build/CMakeFiles/packmol.dir/DependInfo.cmake /usr/bin/make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/build [100%] Built target packmol /usr/local/bin/cmake -E cmake_progress_start /construction/science/packmol/.build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall Installing the project stripped... /usr/local/bin/cmake -DCMAKE_INSTALL_DO_STRIP=1 -P cmake_install.cmake -- Install configuration: "release" -- Installing: /construction/science/packmol/stage/usr/local/bin/packmol ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: check-plist ------------------------------------------------------------------------------- ====> Checking for pkg-plist issues (check-plist) ===> Parsing plist ===> Checking for items in STAGEDIR missing from pkg-plist ===> Checking for items in pkg-plist which are not in STAGEDIR ===> No pkg-plist issues found (check-plist) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for packmol-18.169 file sizes/checksums [1]: 0% file sizes/checksums [1]: 100% packing files [1]: 0% packing files [1]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:00 TOTAL TIME 00:00:29