------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/indexinfo-0.3.1.txz Installing /packages/All/gmp-6.2.0.txz Installing /packages/All/mpfr-4.1.0.txz Installing /packages/All/metis-5.1.0_8.txz ===== Message from metis-5.1.0_8: -- ===> NOTICE: The metis port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port Installing /packages/All/tbb-2020.3.txz Installing /packages/All/mpc-1.1.0_2.txz UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/gettext-runtime-0.21.txz Installing /packages/All/binutils-2.33.1_3,1.txz ===== Message from binutils-2.33.1_3,1: -- ===> NOTICE: The binutils port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port Installing /packages/All/gcc8-8.4.0.txz ===== Message from gcc8-8.4.0: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/openblas-0.3.10,1.txz Installing /packages/All/suitesparse-5.8.1.txz Installing /packages/All/expat-2.2.8.txz Installing /packages/All/libffi-3.3_1.txz Installing /packages/All/ncurses-6.2.20201017.txz Installing /packages/All/readline-8.0.4.txz Installing /packages/All/openssl-1.1.1h_1,1.txz Installing /packages/All/python27-2.7.18_1.txz ===== Message from python27-2.7.18_1: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter Installing /packages/All/py27-setuptools-44.0.0.txz ===== Message from py27-setuptools-44.0.0: -- Only /usr/local/bin/easy_install-2.7 script has been installed since Python 2.7 is not the default Python version. -- ===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Uses Python 2.7 which is EOLed upstream. It is scheduled to be removed on or after 2020-12-31. Installing /packages/All/py27-numpy-1.16.6,1.txz ===== Message from py27-numpy-1.16.6,1: -- ===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Uses Python 2.7 which is EOLed upstream. It is scheduled to be removed on or after 2020-12-31. Installing /packages/All/py27-scipy-1.2.2_1.txz ===== Message from py27-scipy-1.2.2_1: -- ===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Uses Python 2.7 which is EOLed upstream. It is scheduled to be removed on or after 2020-12-31. Installing /packages/All/pcre-8.44.txz Installing /packages/All/swig-4.0.2.txz Installing /packages/All/py27-cython-0.29.21.txz ===== Message from py27-cython-0.29.21: -- ===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Uses Python 2.7 which is EOLed upstream. It is scheduled to be removed on or after 2020-12-31. UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:00:49 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- ===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Uses Python 2.7 which is EOLed upstream. It is scheduled to be removed on or after 2020-12-31. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> py27-scikit-umfpack-0.3.2_3 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Uses Python 2.7 which is EOLed upstream. It is scheduled to be removed on or after 2020-12-31. ===> py27-scikit-umfpack-0.3.2_3 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py27-scikit-umfpack-0.3.2_3 for building SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Uses Python 2.7 which is EOLed upstream. It is scheduled to be removed on or after 2020-12-31. ===> py27-scikit-umfpack-0.3.2_3 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py27-scikit-umfpack-0.3.2_3 for building => SHA256 Checksum OK for scikit-umfpack-0.3.2.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> NOTICE: This port is deprecated; you may wish to reconsider installing it: Uses Python 2.7 which is EOLed upstream. It is scheduled to be removed on or after 2020-12-31. ===> py27-scikit-umfpack-0.3.2_3 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py27-scikit-umfpack-0.3.2_3 for building ===> Extracting for py27-scikit-umfpack-0.3.2_3 => SHA256 Checksum OK for scikit-umfpack-0.3.2.tar.gz. Extracted Memory Use: 0.14M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for py27-scikit-umfpack-0.3.2_3 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> py27-scikit-umfpack-0.3.2_3 depends on package: py27-numpy>=1.16,1<1.20,1 - found ===> py27-scikit-umfpack-0.3.2_3 depends on package: py27-scipy>0 - found ===> py27-scikit-umfpack-0.3.2_3 depends on executable: swig - found ===> py27-scikit-umfpack-0.3.2_3 depends on executable: cython-2.7 - found ===> py27-scikit-umfpack-0.3.2_3 depends on package: py27-setuptools>0 - found ===> py27-scikit-umfpack-0.3.2_3 depends on file: /usr/local/bin/python2.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- ===> py27-scikit-umfpack-0.3.2_3 depends on shared library: libumfpack.so - found (/usr/local/lib/libumfpack.so) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> py27-scikit-umfpack-0.3.2_3 depends on package: py27-numpy>=1.16,1<1.20,1 - found ===> py27-scikit-umfpack-0.3.2_3 depends on package: py27-scipy>0 - found ===> py27-scikit-umfpack-0.3.2_3 depends on executable: swig - found ===> py27-scikit-umfpack-0.3.2_3 depends on executable: cython-2.7 - found ===> py27-scikit-umfpack-0.3.2_3 depends on package: py27-setuptools>0 - found ===> py27-scikit-umfpack-0.3.2_3 depends on file: /usr/local/bin/python2.7 - found ===> py27-scikit-umfpack-0.3.2_3 depends on shared library: libumfpack.so - found (/usr/local/lib/libumfpack.so) ===> Configuring for py27-scikit-umfpack-0.3.2_3 umfpack_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpxBD2fN/tmp creating /tmp/tmpxBD2fN/tmp/tmpxBD2fN compile options: '-MMD -MF /tmp/tmpxBD2fN/file.c.d -c' cc: /tmp/tmpxBD2fN/file.c amd_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpF5oIa7/tmp creating /tmp/tmpF5oIa7/tmp/tmpF5oIa7 compile options: '-MMD -MF /tmp/tmpF5oIa7/file.c.d -c' cc: /tmp/tmpF5oIa7/file.c customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpLYPoKG/tmp creating /tmp/tmpLYPoKG/tmp/tmpLYPoKG compile options: '-MMD -MF /tmp/tmpLYPoKG/file.c.d -c' cc: /tmp/tmpLYPoKG/file.c FOUND: libraries = ['amd', 'amd'] library_dirs = ['/usr/local/lib'] swig_opts = ['-I/usr/local/include/suitesparse'] define_macros = [('SCIPY_AMD_H', None)] include_dirs = ['/usr/local/include/suitesparse'] customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpUdLMeN/tmp creating /tmp/tmpUdLMeN/tmp/tmpUdLMeN compile options: '-MMD -MF /tmp/tmpUdLMeN/file.c.d -c' cc: /tmp/tmpUdLMeN/file.c FOUND: libraries = ['umfpack', 'amd', 'amd', 'umfpack'] library_dirs = ['/usr/local/lib'] swig_opts = ['-I/usr/local/include/suitesparse', '-I/usr/local/include/suitesparse'] define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)] include_dirs = ['/usr/local/include/suitesparse'] blas_opt_info: blas_mkl_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp7Sm6Xq/tmp creating /tmp/tmp7Sm6Xq/tmp/tmp7Sm6Xq compile options: '-MMD -MF /tmp/tmp7Sm6Xq/file.c.d -c' cc: /tmp/tmp7Sm6Xq/file.c libraries mkl_rt not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE blis_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpY3LdHF/tmp creating /tmp/tmpY3LdHF/tmp/tmpY3LdHF compile options: '-MMD -MF /tmp/tmpY3LdHF/file.c.d -c' cc: /tmp/tmpY3LdHF/file.c libraries blis not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE atlas_3_10_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp4wAE50/tmp creating /tmp/tmp4wAE50/tmp/tmp4wAE50 compile options: '-MMD -MF /tmp/tmp4wAE50/file.c.d -c' cc: /tmp/tmp4wAE50/file.c libraries tatlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE atlas_3_10_blas_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp9bUXkR/tmp creating /tmp/tmp9bUXkR/tmp/tmp9bUXkR compile options: '-MMD -MF /tmp/tmp9bUXkR/file.c.d -c' cc: /tmp/tmp9bUXkR/file.c libraries satlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE atlas_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmptsmIQl/tmp creating /tmp/tmptsmIQl/tmp/tmptsmIQl compile options: '-MMD -MF /tmp/tmptsmIQl/file.c.d -c' cc: /tmp/tmptsmIQl/file.c libraries ptf77blas,ptcblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE atlas_blas_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpdYyBil/tmp creating /tmp/tmpdYyBil/tmp/tmpdYyBil compile options: '-MMD -MF /tmp/tmpdYyBil/file.c.d -c' cc: /tmp/tmpdYyBil/file.c libraries f77blas,cblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE accelerate_info: NOT AVAILABLE /usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py:641: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. self.calc_info() blas_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpPq2orX/tmp creating /tmp/tmpPq2orX/tmp/tmpPq2orX compile options: '-MMD -MF /tmp/tmpPq2orX/file.c.d -c' cc: /tmp/tmpPq2orX/file.c libraries blas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE /usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py:641: UserWarning: Blas (http://www.netlib.org/blas/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [blas]) or by setting the BLAS environment variable. self.calc_info() blas_src_info: /usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py:1951: UserWarning: Specified path /usr/local/src is invalid. pre_dirs = system_info.get_paths(self, section, key) NOT AVAILABLE /usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py:641: UserWarning: Blas (http://www.netlib.org/blas/) sources not found. Directories to search for the sources can be specified in the numpy/distutils/site.cfg file (section [blas_src]) or by setting the BLAS_SRC environment variable. self.calc_info() NOT AVAILABLE running config SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for py27-scikit-umfpack-0.3.2_3 umfpack_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpeP2qEA/tmp creating /tmp/tmpeP2qEA/tmp/tmpeP2qEA compile options: '-MMD -MF /tmp/tmpeP2qEA/file.c.d -c' cc: /tmp/tmpeP2qEA/file.c amd_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpCK7SHj/tmp creating /tmp/tmpCK7SHj/tmp/tmpCK7SHj compile options: '-MMD -MF /tmp/tmpCK7SHj/file.c.d -c' cc: /tmp/tmpCK7SHj/file.c customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpuisUqr/tmp creating /tmp/tmpuisUqr/tmp/tmpuisUqr compile options: '-MMD -MF /tmp/tmpuisUqr/file.c.d -c' cc: /tmp/tmpuisUqr/file.c FOUND: libraries = ['amd', 'amd'] library_dirs = ['/usr/local/lib'] swig_opts = ['-I/usr/local/include/suitesparse'] define_macros = [('SCIPY_AMD_H', None)] include_dirs = ['/usr/local/include/suitesparse'] customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpu6D8rl/tmp creating /tmp/tmpu6D8rl/tmp/tmpu6D8rl compile options: '-MMD -MF /tmp/tmpu6D8rl/file.c.d -c' cc: /tmp/tmpu6D8rl/file.c FOUND: libraries = ['umfpack', 'amd', 'amd', 'umfpack'] library_dirs = ['/usr/local/lib'] swig_opts = ['-I/usr/local/include/suitesparse', '-I/usr/local/include/suitesparse'] define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)] include_dirs = ['/usr/local/include/suitesparse'] blas_opt_info: blas_mkl_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpYiz_5A/tmp creating /tmp/tmpYiz_5A/tmp/tmpYiz_5A compile options: '-MMD -MF /tmp/tmpYiz_5A/file.c.d -c' cc: /tmp/tmpYiz_5A/file.c libraries mkl_rt not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE blis_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpcIiAZ2/tmp creating /tmp/tmpcIiAZ2/tmp/tmpcIiAZ2 compile options: '-MMD -MF /tmp/tmpcIiAZ2/file.c.d -c' cc: /tmp/tmpcIiAZ2/file.c libraries blis not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE atlas_3_10_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmprp90Ki/tmp creating /tmp/tmprp90Ki/tmp/tmprp90Ki compile options: '-MMD -MF /tmp/tmprp90Ki/file.c.d -c' cc: /tmp/tmprp90Ki/file.c libraries tatlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE atlas_3_10_blas_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpEWKKS7/tmp creating /tmp/tmpEWKKS7/tmp/tmpEWKKS7 compile options: '-MMD -MF /tmp/tmpEWKKS7/file.c.d -c' cc: /tmp/tmpEWKKS7/file.c libraries satlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE atlas_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmphJqiha/tmp creating /tmp/tmphJqiha/tmp/tmphJqiha compile options: '-MMD -MF /tmp/tmphJqiha/file.c.d -c' cc: /tmp/tmphJqiha/file.c libraries ptf77blas,ptcblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE atlas_blas_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmplhkukC/tmp creating /tmp/tmplhkukC/tmp/tmplhkukC compile options: '-MMD -MF /tmp/tmplhkukC/file.c.d -c' cc: /tmp/tmplhkukC/file.c libraries f77blas,cblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE accelerate_info: NOT AVAILABLE /usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py:641: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. self.calc_info() blas_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp5_arGj/tmp creating /tmp/tmp5_arGj/tmp/tmp5_arGj compile options: '-MMD -MF /tmp/tmp5_arGj/file.c.d -c' cc: /tmp/tmp5_arGj/file.c libraries blas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE /usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py:641: UserWarning: Blas (http://www.netlib.org/blas/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [blas]) or by setting the BLAS environment variable. self.calc_info() blas_src_info: /usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py:1951: UserWarning: Specified path /usr/local/src is invalid. pre_dirs = system_info.get_paths(self, section, key) NOT AVAILABLE /usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py:641: UserWarning: Blas (http://www.netlib.org/blas/) sources not found. Directories to search for the sources can be specified in the numpy/distutils/site.cfg file (section [blas_src]) or by setting the BLAS_SRC environment variable. self.calc_info() NOT AVAILABLE running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "scikits.umfpack.__umfpack" sources creating build creating build/src.dragonfly-5.9-x86_64-2.7 creating build/src.dragonfly-5.9-x86_64-2.7/scikits creating build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack adding 'scikits/umfpack/umfpack.i' to sources. swig: scikits/umfpack/umfpack.i swig -python -I/usr/local/include/suitesparse -I/usr/local/include/suitesparse -I/usr/local/include/suitesparse -o build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c -outdir build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack scikits/umfpack/umfpack.i building data_files sources build_src: building npy-pkg config files running build_py creating build/lib.dragonfly-5.9-x86_64-2.7 creating build/lib.dragonfly-5.9-x86_64-2.7/scikits creating build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack copying scikits/umfpack/interface.py -> build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack copying scikits/umfpack/umfpack.py -> build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack copying scikits/umfpack/_umfpack.py -> build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack copying scikits/umfpack/__init__.py -> build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack copying scikits/umfpack/setup.py -> build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack copying scikits/umfpack/version.py -> build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack copying build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack.py -> build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack running build_ext customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpIF_3TH/tmp creating /tmp/tmpIF_3TH/tmp/tmpIF_3TH compile options: '-MMD -MF /tmp/tmpIF_3TH/file.c.d -c' cc: /tmp/tmpIF_3TH/file.c customize UnixCCompiler using build_ext building 'scikits.umfpack.__umfpack' extension compiling C sources C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating build/temp.dragonfly-5.9-x86_64-2.7/build creating build/temp.dragonfly-5.9-x86_64-2.7/build/src.dragonfly-5.9-x86_64-2.7 creating build/temp.dragonfly-5.9-x86_64-2.7/build/src.dragonfly-5.9-x86_64-2.7/scikits creating build/temp.dragonfly-5.9-x86_64-2.7/build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack compile options: '-DSCIPY_UMFPACK_H -DSCIPY_AMD_H -I/usr/local/include/suitesparse -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I/usr/local/include/python2.7 -c' cc: build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2713: /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_solve': build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:3150:52: warning: passing argument 2 of 'umfpack_dl_solve' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_solve(arg1,(long long const (*))arg2,(long long const (*))arg3,(double const (*))arg4,arg5,(double const (*))arg6,arg7,(double const (*))arg8,arg9); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:48, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_solve.h:26:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:3150:78: warning: passing argument 3 of 'umfpack_dl_solve' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_solve(arg1,(long long const (*))arg2,(long long const (*))arg3,(double const (*))arg4,arg5,(double const (*))arg6,arg7,(double const (*))arg8,arg9); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:48, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_solve.h:27:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_solve': build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:3292:52: warning: passing argument 2 of 'umfpack_zl_solve' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_solve(arg1,(long long const (*))arg2,(long long const (*))arg3,(double const (*))arg4,(double const (*))arg5,arg6,arg7,(double const (*))arg8,(double const (*))arg9,arg10,(double const (*))arg11,arg12); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:48, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_solve.h:52:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:3292:78: warning: passing argument 3 of 'umfpack_zl_solve' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_solve(arg1,(long long const (*))arg2,(long long const (*))arg3,(double const (*))arg4,(double const (*))arg5,arg6,arg7,(double const (*))arg8,(double const (*))arg9,arg10,(double const (*))arg11,arg12); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:48, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_solve.h:53:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_triplet_to_col': build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:3550:71: warning: passing argument 4 of 'umfpack_dl_triplet_to_col' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_triplet_to_col(arg1,arg2,arg3,(long long const (*))arg4,(long long const (*))arg5,(double const (*))arg6,arg7,arg8,arg9,arg10); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:58, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_triplet_to_col.h:29:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ti [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:3550:97: warning: passing argument 5 of 'umfpack_dl_triplet_to_col' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_triplet_to_col(arg1,arg2,arg3,(long long const (*))arg4,(long long const (*))arg5,(double const (*))arg6,arg7,arg8,arg9,arg10); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:58, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_triplet_to_col.h:30:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Tj [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_triplet_to_col': build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:3760:71: warning: passing argument 4 of 'umfpack_zl_triplet_to_col' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_triplet_to_col(arg1,arg2,arg3,(long long const (*))arg4,(long long const (*))arg5,(double const (*))arg6,(double const (*))arg7,arg8,arg9,arg10,arg11,arg12); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:58, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_triplet_to_col.h:57:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ti [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:3760:97: warning: passing argument 5 of 'umfpack_zl_triplet_to_col' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_triplet_to_col(arg1,arg2,arg3,(long long const (*))arg4,(long long const (*))arg5,(double const (*))arg6,(double const (*))arg7,arg8,arg9,arg10,arg11,arg12); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:58, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_triplet_to_col.h:58:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Tj [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_col_to_triplet': build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:3826:61: warning: passing argument 2 of 'umfpack_dl_col_to_triplet' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_col_to_triplet(arg1,(long long const (*))arg2,arg3); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:59, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_col_to_triplet.h:20:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_col_to_triplet': build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:3892:61: warning: passing argument 2 of 'umfpack_zl_col_to_triplet' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_col_to_triplet(arg1,(long long const (*))arg2,arg3); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:59, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_col_to_triplet.h:34:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_transpose': build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:4050:61: warning: passing argument 3 of 'umfpack_dl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(long long const (*))arg6,(long long const (*))arg7,arg8,arg9,arg10); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_transpose.h:28:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:4050:87: warning: passing argument 4 of 'umfpack_dl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(long long const (*))arg6,(long long const (*))arg7,arg8,arg9,arg10); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_transpose.h:29:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:4050:136: warning: passing argument 6 of 'umfpack_dl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(long long const (*))arg6,(long long const (*))arg7,arg8,arg9,arg10); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_transpose.h:31:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long P [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:4050:162: warning: passing argument 7 of 'umfpack_dl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(long long const (*))arg6,(long long const (*))arg7,arg8,arg9,arg10); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_transpose.h:32:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Q [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_transpose': build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:4244:61: warning: passing argument 3 of 'umfpack_zl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,(long long const (*))arg7,(long long const (*))arg8,arg9,arg10,arg11,arg12,arg13); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_transpose.h:57:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:4244:87: warning: passing argument 4 of 'umfpack_zl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,(long long const (*))arg7,(long long const (*))arg8,arg9,arg10,arg11,arg12,arg13); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_transpose.h:58:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:4244:159: warning: passing argument 7 of 'umfpack_zl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,(long long const (*))arg7,(long long const (*))arg8,arg9,arg10,arg11,arg12,arg13); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_transpose.h:60:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long P [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:4244:185: warning: passing argument 8 of 'umfpack_zl_transpose' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_transpose(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,(long long const (*))arg7,(long long const (*))arg8,arg9,arg10,arg11,arg12,arg13); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:60, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_transpose.h:61:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Q [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_symbolic': build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:4887:60: warning: passing argument 3 of 'umfpack_dl_symbolic' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_symbolic(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,arg6,(double const (*))arg7,arg8); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:46, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_symbolic.h:26:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:4887:86: warning: passing argument 4 of 'umfpack_dl_symbolic' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_symbolic(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,arg6,(double const (*))arg7,arg8); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:46, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_symbolic.h:27:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_symbolic': build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:5013:60: warning: passing argument 3 of 'umfpack_zl_symbolic' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_symbolic(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,arg7,(double const (*))arg8,arg9); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:46, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_symbolic.h:50:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:5013:86: warning: passing argument 4 of 'umfpack_zl_symbolic' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_symbolic(arg1,arg2,(long long const (*))arg3,(long long const (*))arg4,(double const (*))arg5,(double const (*))arg6,arg7,(double const (*))arg8,arg9); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:46, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_symbolic.h:51:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_dl_numeric': build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:5119:49: warning: passing argument 1 of 'umfpack_dl_numeric' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_numeric((long long const (*))arg1,(long long const (*))arg2,(double const (*))arg3,arg4,arg5,(double const (*))arg6,arg7); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:47, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_numeric.h:23:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:5119:75: warning: passing argument 2 of 'umfpack_dl_numeric' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_dl_numeric((long long const (*))arg1,(long long const (*))arg2,(double const (*))arg3,arg4,arg5,(double const (*))arg6,arg7); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:47, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_numeric.h:24:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c: In function '_wrap_umfpack_zl_numeric': build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:5233:49: warning: passing argument 1 of 'umfpack_zl_numeric' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_numeric((long long const (*))arg1,(long long const (*))arg2,(double const (*))arg3,(double const (*))arg4,arg5,arg6,(double const (*))arg7,arg8); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:47, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_numeric.h:45:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ap [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:5233:75: warning: passing argument 2 of 'umfpack_zl_numeric' from incompatible pointer type [-Wincompatible-pointer-types] result = (SuiteSparse_long)umfpack_zl_numeric((long long const (*))arg1,(long long const (*))arg2,(double const (*))arg3,(double const (*))arg4,arg5,arg6,(double const (*))arg7,arg8); ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/include/suitesparse/umfpack.h:47, from build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.c:2712: /usr/local/include/suitesparse/umfpack_numeric.h:46:28: note: expected 'const long int *' but argument is of type 'const long long int *' const SuiteSparse_long Ai [ ], ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.9-x86_64-2.7/build/src.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack_wrap.o -L/usr/local/lib -L/usr/local/lib -lrt -lumfpack -lamd -lamd -lumfpack -lpython2.7 -o build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack/__umfpack.so SUCCEEDED 00:00:05 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> py27-scikit-umfpack-0.3.2_3 depends on package: py27-numpy>=1.16,1<1.20,1 - found ===> py27-scikit-umfpack-0.3.2_3 depends on package: py27-scipy>0 - found ===> py27-scikit-umfpack-0.3.2_3 depends on package: py27-setuptools>0 - found ===> py27-scikit-umfpack-0.3.2_3 depends on file: /usr/local/bin/python2.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for py27-scikit-umfpack-0.3.2_3 ===> py27-scikit-umfpack-0.3.2_3 depends on package: py27-numpy>=1.16,1<1.20,1 - found ===> py27-scikit-umfpack-0.3.2_3 depends on package: py27-scipy>0 - found ===> py27-scikit-umfpack-0.3.2_3 depends on package: py27-setuptools>0 - found ===> py27-scikit-umfpack-0.3.2_3 depends on file: /usr/local/bin/python2.7 - found ===> Generating temporary packing list umfpack_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpznC1Sg/tmp creating /tmp/tmpznC1Sg/tmp/tmpznC1Sg compile options: '-MMD -MF /tmp/tmpznC1Sg/file.c.d -c' cc: /tmp/tmpznC1Sg/file.c amd_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpzvI6Yo/tmp creating /tmp/tmpzvI6Yo/tmp/tmpzvI6Yo compile options: '-MMD -MF /tmp/tmpzvI6Yo/file.c.d -c' cc: /tmp/tmpzvI6Yo/file.c customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpMDHGoa/tmp creating /tmp/tmpMDHGoa/tmp/tmpMDHGoa compile options: '-MMD -MF /tmp/tmpMDHGoa/file.c.d -c' cc: /tmp/tmpMDHGoa/file.c FOUND: libraries = ['amd', 'amd'] library_dirs = ['/usr/local/lib'] swig_opts = ['-I/usr/local/include/suitesparse'] define_macros = [('SCIPY_AMD_H', None)] include_dirs = ['/usr/local/include/suitesparse'] customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpH98u9q/tmp creating /tmp/tmpH98u9q/tmp/tmpH98u9q compile options: '-MMD -MF /tmp/tmpH98u9q/file.c.d -c' cc: /tmp/tmpH98u9q/file.c FOUND: libraries = ['umfpack', 'amd', 'amd', 'umfpack'] library_dirs = ['/usr/local/lib'] swig_opts = ['-I/usr/local/include/suitesparse', '-I/usr/local/include/suitesparse'] define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)] include_dirs = ['/usr/local/include/suitesparse'] blas_opt_info: blas_mkl_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpLcLBqk/tmp creating /tmp/tmpLcLBqk/tmp/tmpLcLBqk compile options: '-MMD -MF /tmp/tmpLcLBqk/file.c.d -c' cc: /tmp/tmpLcLBqk/file.c libraries mkl_rt not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE blis_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmps6cPg9/tmp creating /tmp/tmps6cPg9/tmp/tmps6cPg9 compile options: '-MMD -MF /tmp/tmps6cPg9/file.c.d -c' cc: /tmp/tmps6cPg9/file.c libraries blis not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE atlas_3_10_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpOXzTCe/tmp creating /tmp/tmpOXzTCe/tmp/tmpOXzTCe compile options: '-MMD -MF /tmp/tmpOXzTCe/file.c.d -c' cc: /tmp/tmpOXzTCe/file.c libraries tatlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE atlas_3_10_blas_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpCKiegs/tmp creating /tmp/tmpCKiegs/tmp/tmpCKiegs compile options: '-MMD -MF /tmp/tmpCKiegs/file.c.d -c' cc: /tmp/tmpCKiegs/file.c libraries satlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE atlas_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmp0g2G8x/tmp creating /tmp/tmp0g2G8x/tmp/tmp0g2G8x compile options: '-MMD -MF /tmp/tmp0g2G8x/file.c.d -c' cc: /tmp/tmp0g2G8x/file.c libraries ptf77blas,ptcblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE atlas_blas_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpKPM9_n/tmp creating /tmp/tmpKPM9_n/tmp/tmpKPM9_n compile options: '-MMD -MF /tmp/tmpKPM9_n/file.c.d -c' cc: /tmp/tmpKPM9_n/file.c libraries f77blas,cblas,atlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE accelerate_info: NOT AVAILABLE /usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py:641: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. self.calc_info() blas_info: customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpEOLDu_/tmp creating /tmp/tmpEOLDu_/tmp/tmpEOLDu_ compile options: '-MMD -MF /tmp/tmpEOLDu_/file.c.d -c' cc: /tmp/tmpEOLDu_/file.c libraries blas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc8/gcc/x86_64-portbld-dragonfly5.9/8.4.0/../../../'] NOT AVAILABLE /usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py:641: UserWarning: Blas (http://www.netlib.org/blas/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [blas]) or by setting the BLAS environment variable. self.calc_info() blas_src_info: /usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py:1951: UserWarning: Specified path /usr/local/src is invalid. pre_dirs = system_info.get_paths(self, section, key) NOT AVAILABLE /usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py:641: UserWarning: Blas (http://www.netlib.org/blas/) sources not found. Directories to search for the sources can be specified in the numpy/distutils/site.cfg file (section [blas_src]) or by setting the BLAS_SRC environment variable. self.calc_info() NOT AVAILABLE running install running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "scikits.umfpack.__umfpack" sources adding 'scikits/umfpack/umfpack.i' to sources. building data_files sources build_src: building npy-pkg config files running build_py copying scikits/umfpack/version.py -> build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack running build_ext customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpvSY9gB/tmp creating /tmp/tmpvSY9gB/tmp/tmpvSY9gB compile options: '-MMD -MF /tmp/tmpvSY9gB/file.c.d -c' cc: /tmp/tmpvSY9gB/file.c customize UnixCCompiler using build_ext running install_lib creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7 creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack copying build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack/__umfpack.so -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack copying build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack/umfpack.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack copying build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack/_umfpack.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack copying build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack/interface.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack copying build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack/__init__.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack copying build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack/setup.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack copying build/lib.dragonfly-5.9-x86_64-2.7/scikits/umfpack/version.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack/umfpack.py to umfpack.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack/_umfpack.py to _umfpack.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack/interface.py to interface.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack/__init__.py to __init__.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack/setup.py to setup.pyc byte-compiling /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack/version.py to version.pyc writing byte-compilation script '/tmp/tmpQmWj9i.py' /usr/local/bin/python2.7 -O /tmp/tmpQmWj9i.py removing /tmp/tmpQmWj9i.py running install_data copying MANIFEST.in -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/ creating /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack/tests copying scikits/umfpack/tests/test_interface.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack/tests/ copying scikits/umfpack/tests/test_umfpack.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack/tests/ copying scikits/umfpack/tests/try_umfpack.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits/umfpack/tests/ copying scikits/__init__.py -> /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikits running install_clib customize UnixCCompiler C compiler: cc -fno-strict-aliasing -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -DNDEBUG -pipe -O2 -fno-strict-aliasing -fPIC creating /tmp/tmpwDTUPC/tmp creating /tmp/tmpwDTUPC/tmp/tmpwDTUPC compile options: '-MMD -MF /tmp/tmpwDTUPC/file.c.d -c' cc: /tmp/tmpwDTUPC/file.c running install_egg_info running egg_info creating scikit_umfpack.egg-info writing requirements to scikit_umfpack.egg-info/requires.txt writing scikit_umfpack.egg-info/PKG-INFO writing top-level names to scikit_umfpack.egg-info/top_level.txt writing dependency_links to scikit_umfpack.egg-info/dependency_links.txt writing manifest file 'scikit_umfpack.egg-info/SOURCES.txt' reading manifest file 'scikit_umfpack.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'scikit_umfpack.egg-info/SOURCES.txt' Copying scikit_umfpack.egg-info to /construction/math/py-scikit-umfpack/stage/usr/local/lib/python2.7/site-packages/scikit_umfpack-0.3.2-py2.7.egg-info running install_scripts writing list of installed files to '/construction/math/py-scikit-umfpack/.PLIST.pymodtmp' ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: 'lib/python2.7/site-packages/scikits/umfpack/__umfpack.so' is not stripped consider trying INSTALL_TARGET=install-strip or using ${STRIP_CMD} Error: /usr/local/lib/python2.7/site-packages/scikits/umfpack/__umfpack.so is linked to /usr/local/lib/libopenblas.so.0 from math/openblas but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libopenblas.so:math/openblas Error: /usr/local/lib/python2.7/site-packages/scikits/umfpack/__umfpack.so is linked to /usr/local/lib/libintl.so.8 from devel/gettext-runtime but it is not declared as a dependency Warning: you need USES+=gettext-runtime Error: /usr/local/lib/python2.7/site-packages/scikits/umfpack/__umfpack.so is linked to /usr/local/lib/gcc8/libgfortran.so.5 from lang/gcc8 but it is not declared as a dependency Error: /usr/local/lib/python2.7/site-packages/scikits/umfpack/__umfpack.so is linked to /usr/local/lib/libmetis.so.2 from math/metis but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libmetis.so:math/metis Error: /usr/local/lib/python2.7/site-packages/scikits/umfpack/__umfpack.so is linked to /usr/local/lib/gcc8/libquadmath.so.0 from lang/gcc8 but it is not declared as a dependency Error: /usr/local/lib/python2.7/site-packages/scikits/umfpack/__umfpack.so is linked to /usr/local/lib/gcc8/libgcc_s.so.1 from lang/gcc8 but it is not declared as a dependency Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:03 ------------------------------------------------------------------------------- -- Phase: check-plist ------------------------------------------------------------------------------- ====> Checking for pkg-plist issues (check-plist) ===> Parsing plist ===> Checking for items in STAGEDIR missing from pkg-plist ===> Checking for items in pkg-plist which are not in STAGEDIR ===> No pkg-plist issues found (check-plist) SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for py27-scikit-umfpack-0.3.2_3 file sizes/checksums [30]: 0% file sizes/checksums [30]: 100% packing files [30]: 0% packing files [30]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:00 TOTAL TIME 00:01:01