------------------------------------------------------------------------------- -- Phase: Environment ------------------------------------------------------------------------------- NO_DEPENDS=1 UNAME_r=5.9 UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=unknown UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 LANG=C HOME=/root USER=root TERM=dumb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: showconfig ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ENV ------------------------------------------------------------------------------- F77="gfortran8" FC="gfortran8" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc8" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc8" PKG_CONFIG=pkgconf XDG_DATA_HOME=/construction/math/dune-polygongrid XDG_CONFIG_HOME=/construction/math/dune-polygongrid HOME=/construction/math/dune-polygongrid TMPDIR="/tmp" PATH=/construction/math/dune-polygongrid/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ARGS ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ENV ------------------------------------------------------------------------------- F77="gfortran8" FC="gfortran8" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc8" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc8" XDG_DATA_HOME=/construction/math/dune-polygongrid XDG_CONFIG_HOME=/construction/math/dune-polygongrid HOME=/construction/math/dune-polygongrid TMPDIR="/tmp" PATH=/construction/math/dune-polygongrid/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc8 -L/usr/local/lib/gcc8 -B/usr/local/bin " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ARGS ------------------------------------------------------------------------------- DESTDIR=/construction/math/dune-polygongrid/stage SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: PLIST_SUB ------------------------------------------------------------------------------- CMAKE_BUILD_TYPE="release" OSREL=5.9 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/dune-polygongrid" EXAMPLESDIR="share/examples/dune-polygongrid" DATADIR="share/dune-polygongrid" WWWDIR="www/dune-polygongrid" ETCDIR="etc/dune-polygongrid" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: SUB_LIST ------------------------------------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/dune-polygongrid DOCSDIR=/usr/local/share/doc/dune-polygongrid EXAMPLESDIR=/usr/local/share/examples/dune-polygongrid WWWDIR=/usr/local/www/dune-polygongrid ETCDIR=/usr/local/etc/dune-polygongrid SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: /etc/make.conf ------------------------------------------------------------------------------- DPORTS_BUILDER=yes DISABLE_LICENSES=yes DEFAULT_VERSIONS=ssl=openssl FORCE_PACKAGE=yes DEVELOPER=yes USE_PACKAGE_DEPENDS_ONLY=yes PORTSDIR=/xports PORT_DBDIR=/options PKG_DBDIR=/var/db/pkg PKG_CACHEDIR=/var/cache/pkg PKG_SUFX=.txz DEVELOPER=1 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500906 OSVERSION=9999999 OSREL=5.9 _OSRELEASE=5.9-SYNTH DISTDIR=/distfiles WRKDIRPREFIX=/construction BATCH=yes PACKAGE_BUILDING=yes PKG_CREATE_VERBOSE=yes MAKE_JOBS_NUMBER=10 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/pciids-20201127.txz Installing /packages/All/libpciaccess-0.16.txz Installing /packages/All/libxml2-2.9.10_2.txz Installing /packages/All/hwloc2-2.3.0_1.txz Installing /packages/All/libltdl-2.4.6.txz Installing /packages/All/openssl-1.1.1i,1.txz Installing /packages/All/libevent-2.1.12.txz Installing /packages/All/perl5-5.32.0_1.txz Installing /packages/All/munge-0.5.14_1.txz Installing /packages/All/indexinfo-0.3.1.txz Installing /packages/All/gmp-6.2.1.txz Installing /packages/All/mpfr-4.1.0.txz Installing /packages/All/mpc-1.1.0_2.txz UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/gettext-runtime-0.21.txz Installing /packages/All/binutils-2.33.1_4,1.txz Installing /packages/All/gcc8-8.4.0.txz ===== Message from gcc8-8.4.0: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/openmpi-4.1.0_1.txz Installing /packages/All/libnghttp2-1.42.0.txz Installing /packages/All/ca_root_nss-3.58.txz ===== Message from ca_root_nss-3.58: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem Installing /packages/All/curl-7.74.0.txz Installing /packages/All/expat-2.2.10.txz Installing /packages/All/libuv-1.40.0.txz Installing /packages/All/rhash-1.4.1.txz Installing /packages/All/liblz4-1.9.3,1.txz Installing /packages/All/libarchive-3.4.3_1,1.txz Installing /packages/All/ncurses-6.2.20210116.txz Installing /packages/All/cmake-3.19.2.txz Installing /packages/All/pkgconf-1.7.3,1.txz Installing /packages/All/openblas-0.3.12,1.txz Installing /packages/All/tbb-2020.3_1.txz Installing /packages/All/libffi-3.3_1.txz Installing /packages/All/readline-8.0.4_1.txz Installing /packages/All/python37-3.7.9_1.txz ===== Message from python37-3.7.9_1: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py37-gdbm databases/py-gdbm@py37 py37-sqlite3 databases/py-sqlite3@py37 py37-tkinter x11-toolkits/py-tkinter@py37 Installing /packages/All/dune-common-2.7.1.txz Installing /packages/All/dune-geometry-2.7.1.txz Installing /packages/All/dune-uggrid-2.7.1.txz Installing /packages/All/dune-grid-2.7.1.txz UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:01:22 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> dune-polygongrid-g20200214 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> dune-polygongrid-g20200214 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by dune-polygongrid-g20200214 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> dune-polygongrid-g20200214 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by dune-polygongrid-g20200214 for building => SHA256 Checksum OK for extensions-dune-polygongrid-608b915a7c6e7aed072a3d54745699a87e085d51_GL0.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> dune-polygongrid-g20200214 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by dune-polygongrid-g20200214 for building ===> Extracting for dune-polygongrid-g20200214 => SHA256 Checksum OK for extensions-dune-polygongrid-608b915a7c6e7aed072a3d54745699a87e085d51_GL0.tar.gz. Extracted Memory Use: 0.25M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for dune-polygongrid-g20200214 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> dune-polygongrid-g20200214 depends on file: /usr/local/mpi/openmpi/lib/libmpi.so - found ===> dune-polygongrid-g20200214 depends on file: /usr/local/bin/cmake - found ===> dune-polygongrid-g20200214 depends on executable: gfortran8 - found ===> dune-polygongrid-g20200214 depends on package: pkgconf>=1.3.0_1 - found ===> dune-polygongrid-g20200214 depends on file: /usr/local/bin/as - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- ===> dune-polygongrid-g20200214 depends on shared library: libdunecommon.so - found (/usr/local/lib/libdunecommon.so) ===> dune-polygongrid-g20200214 depends on shared library: libdunegeometry.so - found (/usr/local/lib/libdunegeometry.so) ===> dune-polygongrid-g20200214 depends on shared library: libdunegrid.so - found (/usr/local/lib/libdunegrid.so) ===> dune-polygongrid-g20200214 depends on shared library: libugL.so - found (/usr/local/lib/libugL.so) ===> dune-polygongrid-g20200214 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so) ===> dune-polygongrid-g20200214 depends on shared library: libtbb.so - found (/usr/local/lib/libtbb.so) SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> dune-polygongrid-g20200214 depends on file: /usr/local/mpi/openmpi/lib/libmpi.so - found ===> dune-polygongrid-g20200214 depends on file: /usr/local/bin/cmake - found ===> dune-polygongrid-g20200214 depends on executable: gfortran8 - found ===> dune-polygongrid-g20200214 depends on package: pkgconf>=1.3.0_1 - found ===> dune-polygongrid-g20200214 depends on file: /usr/local/bin/as - found ===> dune-polygongrid-g20200214 depends on shared library: libdunecommon.so - found (/usr/local/lib/libdunecommon.so) ===> dune-polygongrid-g20200214 depends on shared library: libdunegeometry.so - found (/usr/local/lib/libdunegeometry.so) ===> dune-polygongrid-g20200214 depends on shared library: libdunegrid.so - found (/usr/local/lib/libdunegrid.so) ===> dune-polygongrid-g20200214 depends on shared library: libugL.so - found (/usr/local/lib/libugL.so) ===> dune-polygongrid-g20200214 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so) ===> dune-polygongrid-g20200214 depends on shared library: libtbb.so - found (/usr/local/lib/libtbb.so) ===> Configuring for dune-polygongrid-g20200214 ===> Performing out-of-source build /bin/mkdir -p /construction/math/dune-polygongrid/.build -- The CXX compiler identification is GNU 8.3.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- The C compiler identification is GNU 8.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Dependencies for dune-polygongrid: dune-grid (>= 2.6) -- Suggestions for dune-polygongrid: dune-python (>= 2.6) -- Dependencies for dune-grid: dune-geometry (>= 2.7) -- Suggestions for dune-grid: dune-uggrid (>=2.7) -- Could NOT find dune-python (missing: dune-python_DIR) -- No full CMake package configuration support available. Falling back to pkg-config. -- Found PkgConfig: pkgconf (found version "1.7.3") -- Checking for module 'dune-python>= 2.6' -- Package 'dune-python', required by 'virtual:world', not found -- Dependencies for dune-geometry: dune-common (>= 2.7) -- Dependencies for dune-uggrid: dune-common (>= 2.7) -- The Fortran compiler identification is GNU 8.4.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/local/bin/gfortran8 - skipped -- Checking whether /usr/local/bin/gfortran8 supports Fortran 90 -- Checking whether /usr/local/bin/gfortran8 supports Fortran 90 - yes -- Performing Test cxx_std_flag_17 -- Performing Test cxx_std_flag_17 - Success -- Performing Test compiler_supports_cxx17 -- Performing Test compiler_supports_cxx17 - Success -- Performing Test HAS_ATTRIBUTE_UNUSED -- Performing Test HAS_ATTRIBUTE_UNUSED - Success -- Performing Test HAS_ATTRIBUTE_DEPRECATED -- Performing Test HAS_ATTRIBUTE_DEPRECATED - Success -- Performing Test HAS_ATTRIBUTE_DEPRECATED_MSG -- Performing Test HAS_ATTRIBUTE_DEPRECATED_MSG - Success -- Performing Test HAVE_IS_INDEXABLE_SUPPORT -- Performing Test HAVE_IS_INDEXABLE_SUPPORT - Success -- Performing Test DUNE_HAVE_CXX_CLASS_TEMPLATE_ARGUMENT_DEDUCTION -- Performing Test DUNE_HAVE_CXX_CLASS_TEMPLATE_ARGUMENT_DEDUCTION - Success -- Performing Test DUNE_HAVE_CXX_OPTIONAL -- Performing Test DUNE_HAVE_CXX_OPTIONAL - Success -- Performing Test DUNE_HAVE_CXX_VARIANT -- Performing Test DUNE_HAVE_CXX_VARIANT - Success -- Looking for pthread.h -- Looking for pthread.h - found -- Found Threads: TRUE -- Performing Test STDTHREAD_WORKS -- Performing Test STDTHREAD_WORKS - Success -- Performing Test DUNE_SUPPORTS_CXX_THROW_IN_CONSTEXPR -- Performing Test DUNE_SUPPORTS_CXX_THROW_IN_CONSTEXPR - Success -- Performing Test DUNE_HAVE_C_ALIGNED_ALLOC -- Performing Test DUNE_HAVE_C_ALIGNED_ALLOC - Success -- Looking for C++ include experimental/type_traits -- Looking for C++ include experimental/type_traits - found -- Looking for std::move> -- Looking for std::move> - found -- Looking for std::apply,std::tuple> -- Looking for std::apply,std::tuple> - found -- Looking for std::experimental::make_array -- Looking for std::experimental::make_array - found -- Looking for std::move> -- Looking for std::move> - found -- Looking for std::identity -- Looking for std::identity - not found -- Performing Test HAVE_CXA_DEMANGLE -- Performing Test HAVE_CXA_DEMANGLE - Success -- Could NOT find MPI_C (missing: MPI_C_LIB_NAMES MPI_C_HEADER_DIR MPI_C_WORKS) -- Could NOT find MPI_CXX (missing: MPI_CXX_LIB_NAMES MPI_CXX_HEADER_DIR MPI_CXX_WORKS) -- Could NOT find MPI_Fortran (missing: MPI_Fortran_LIB_NAMES MPI_Fortran_F77_HEADER_DIR MPI_Fortran_MODULE_DIR MPI_Fortran_WORKS) -- Could NOT find MPI (missing: MPI_C_FOUND MPI_CXX_FOUND MPI_Fortran_FOUND) -- Detecting Fortran/C Interface -- Detecting Fortran/C Interface - Found GLOBAL and MODULE mangling -- Verifying Fortran/CXX Compiler Compatibility -- Verifying Fortran/CXX Compiler Compatibility - Success -- Could NOT find LATEX (missing: LATEX_COMPILER) -- Could NOT find LatexMk (missing: LATEXMK_EXECUTABLE) -- Could NOT find LATEX (missing: LATEX_COMPILER) CMake Warning at /usr/local/share/dune/cmake/modules/DuneDoc.cmake:83 (message): Need latex to create documentation! Call Stack (most recent call first): /usr/local/share/dune/cmake/modules/DuneMacros.cmake:729 (include) CMakeLists.txt:8 (dune_project) CMake Warning at /usr/local/share/dune/cmake/modules/DuneDoc.cmake:87 (message): Need bibtex to create documentation! Call Stack (most recent call first): /usr/local/share/dune/cmake/modules/DuneMacros.cmake:729 (include) CMakeLists.txt:8 (dune_project) CMake Warning at /usr/local/share/dune/cmake/modules/DuneDoc.cmake:91 (message): Need makeindex to create documentation! Call Stack (most recent call first): /usr/local/share/dune/cmake/modules/DuneMacros.cmake:729 (include) CMakeLists.txt:8 (dune_project) CMake Warning at /usr/local/share/dune/cmake/modules/DuneDoc.cmake:95 (message): Need imagemagick to create latex documentation! Call Stack (most recent call first): /usr/local/share/dune/cmake/modules/DuneMacros.cmake:729 (include) CMakeLists.txt:8 (dune_project) -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE) -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Searching for macro file 'DuneCommonMacros' for module 'dune-common'. -- Performing tests specific to dune-common from file /usr/local/share/dune/cmake/modules/DuneCommonMacros.cmake. -- Set Minimal Debug Level to 4 -- Looking for Fortran sgemm -- Looking for Fortran sgemm - not found -- Looking for Fortran sgemm -- Looking for Fortran sgemm - found -- Found BLAS: /usr/local/lib/libopenblas.so -- Looking for Fortran cheev -- Looking for Fortran cheev - found -- Found LAPACK: /usr/local/lib/libopenblas.so;-pthread;-lm;-ldl -- Looking for C++ include gmpxx.h -- Looking for C++ include gmpxx.h - found -- Looking for __gmpz_abs in /usr/local/lib/libgmp.so -- Looking for __gmpz_abs in /usr/local/lib/libgmp.so - found -- Found GMP: /usr/local/include CMake Warning at /usr/local/share/dune/cmake/modules/DuneCommonMacros.cmake:31 (find_package): By not providing "FindQuadMath.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "QuadMath", but CMake did not find one. Could not find a package configuration file provided by "QuadMath" with any of the following names: QuadMathConfig.cmake quadmath-config.cmake Add the installation prefix of "QuadMath" to CMAKE_PREFIX_PATH or set "QuadMath_DIR" to a directory containing one of the above files. If "QuadMath" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): /usr/local/share/dune/cmake/modules/DuneMacros.cmake:583 (include) /usr/local/share/dune/cmake/modules/DuneMacros.cmake:735 (dune_process_dependency_macros) CMakeLists.txt:8 (dune_project) -- Looking for sys/mman.h -- Looking for sys/mman.h - found -- Performing Test HAVE_MPROTECT -- Performing Test HAVE_MPROTECT - Success -- Library dir: TBB_LIBRARY_DIR-NOTFOUND -- Performing Test TBB_COMPILE_TEST -- Performing Test TBB_COMPILE_TEST - Success -- Found TBB: /usr/local/include found components: allocator missing components: cpf -- defaulting TBB_CACHE_ALIGNED_ALLOCATOR_ALIGNMENT to 128 -- Could NOT find Vc (missing: Vc_DIR) -- Found PythonInterp: /usr/local/bin/python3.7 (found suitable version "3.7.9", minimum required is "3") -- Found PythonLibs: /usr/local/lib/libpython3.7m.so (found version "3.7.9") -- Failed to find the python package pip with interpreter /usr/local/bin/python3.7. (missing: DUNE_PYTHON_pip_FOUND) -- Setting dune-common_INCLUDE_DIRS=/usr/local/include -- Setting dune-common_LIBRARIES=dunecommon -- Searching for macro file 'DuneUggridMacros' for module 'dune-uggrid'. -- Performing tests specific to dune-uggrid from file /usr/local/share/dune/cmake/modules/DuneUggridMacros.cmake. -- Looking for rpc/rpc.h -- Looking for rpc/rpc.h - found -- Setting dune-uggrid_INCLUDE_DIRS=/usr/local/include -- Setting dune-uggrid_LIBRARIES=ugL;ugS2;ugS3 -- Searching for macro file 'DuneGeometryMacros' for module 'dune-geometry'. -- No module specific tests performed for module 'dune-geometry' because macro file 'DuneGeometryMacros.cmake' not found in /construction/math/dune-polygongrid/dune-polygongrid-608b915a7c6e7aed072a3d54745699a87e085d51-608b915a7c6e7aed072a3d54745699a87e085d51/cmake/modules;/usr/local/share/dune/cmake/modules;/usr/local/share/dune/cmake/modules;/usr/local/share/dune/cmake/modules;/usr/local/share/dune/cmake/modules. -- Setting dune-geometry_INCLUDE_DIRS=/usr/local/include -- Setting dune-geometry_LIBRARIES=dunegeometry -- Searching for macro file 'DunePythonMacros' for module 'dune-python'. -- No module specific tests performed for module 'dune-python' because macro file 'DunePythonMacros.cmake' not found in /construction/math/dune-polygongrid/dune-polygongrid-608b915a7c6e7aed072a3d54745699a87e085d51-608b915a7c6e7aed072a3d54745699a87e085d51/cmake/modules;/usr/local/share/dune/cmake/modules;/usr/local/share/dune/cmake/modules;/usr/local/share/dune/cmake/modules;/usr/local/share/dune/cmake/modules. -- Searching for macro file 'DuneGridMacros' for module 'dune-grid'. -- Performing tests specific to dune-grid from file /usr/local/share/dune/cmake/modules/DuneGridMacros.cmake. -- Looking for mkstemp -- Looking for mkstemp - found -- Looking for metis.h -- Looking for metis.h - not found -- Could NOT find METIS (missing: METIS_INCLUDE_DIR METIS_LIBRARY HAVE_METIS_PARTGRAPHKWAY) -- Could NOT find ParMETIS (missing: METIS not found which is required for ParMETIS.) -- Could NOT find ParMETIS (missing: PARMETIS_INCLUDE_DIR PARMETIS_LIBRARY HAVE_PARMETIS) CMake Warning (dev) at /usr/local/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:426 (message): The package name passed to `find_package_handle_standard_args` (PkgConfig) does not match the name of the calling package (Psurface). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindPkgConfig.cmake:67 (find_package_handle_standard_args) /usr/local/share/dune/cmake/modules/FindPsurface.cmake:63 (include) /usr/local/share/dune/cmake/modules/DuneGridMacros.cmake:20 (find_package) /usr/local/share/dune/cmake/modules/DuneMacros.cmake:583 (include) /usr/local/share/dune/cmake/modules/DuneMacros.cmake:735 (dune_process_dependency_macros) CMakeLists.txt:8 (dune_project) This warning is for project developers. Use -Wno-dev to suppress it. -- Checking for one of the modules 'psurface' -- Checking for module 'psurface' -- Package 'psurface', required by 'virtual:world', not found CMake Warning (dev) at /usr/local/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:426 (message): The package name passed to `find_package_handle_standard_args` (psurface) does not match the name of the calling package (Psurface). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /usr/local/share/dune/cmake/modules/FindPsurface.cmake:96 (find_package_handle_standard_args) /usr/local/share/dune/cmake/modules/DuneGridMacros.cmake:20 (find_package) /usr/local/share/dune/cmake/modules/DuneMacros.cmake:583 (include) /usr/local/share/dune/cmake/modules/DuneMacros.cmake:735 (dune_process_dependency_macros) CMakeLists.txt:8 (dune_project) This warning is for project developers. Use -Wno-dev to suppress it. -- Could NOT find psurface (missing: PSURFACE_INCLUDE_DIR PSURFACE_LIBRARY) -- Could NOT find AmiraMesh (missing: AMIRAMESH_INCLUDE_DIR AMIRAMESH_LIBRARY) -- Setting dune-grid_INCLUDE_DIRS=/usr/local/include -- Setting dune-grid_LIBRARIES=dunegrid -- Searching for macro file 'DunePolygongridMacros' for module 'dune-polygongrid'. -- Performing tests specific to dune-polygongrid from file /construction/math/dune-polygongrid/dune-polygongrid-608b915a7c6e7aed072a3d54745699a87e085d51-608b915a7c6e7aed072a3d54745699a87e085d51/cmake/modules/DunePolygongridMacros.cmake. -- Adding custom target for config.h generation -- The following OPTIONAL packages have been found: * dune-uggrid * PkgConfig, Unified interface for querying installed libraries To find Dune module dependencies * BLAS, fast linear algebra routines * Threads, Multi-threading library * LAPACK, fast linear algebra routines * GMP, GNU multi-precision library including the C++ bindings GMPxx Multi-precision quadrature rules, basis function evaluation etc. * TBB, Threading Building Blocks library Parallel programming on multi-core processors * PythonInterp (required version >= 3) * PythonLibs -- The following REQUIRED packages have been found: * dune-common * dune-grid * dune-geometry -- The following OPTIONAL packages have not been found: * dune-python * MPI, Message Passing Interface library Parallel programming on multiple processors * LatexMk * LATEX, Type setting system To generate the documentation * Sphinx, Documentation generator, To generate the documentation from CMake and Python sources * Doxygen, Class documentation generator, To generate the class documentation from C++ sources * QuadMath * Inkscape, converts SVG images, To generate the documentation with LaTeX * Vc, C++ Vectorization library, For use of SIMD instructions * ParMETIS * Alberta * Psurface * AmiraMesh -- Configuring done CMake Warning (dev) in CMakeLists.txt: Policy CMP0087 is not set: Install CODE|SCRIPT allow the use of generator expressions. Run "cmake --help-policy CMP0087" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_DEBUG CMAKE_MODULE_LINKER_FLAGS -- Build files have been written to: /construction/math/dune-polygongrid/.build SUCCEEDED 00:00:43 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for dune-polygongrid-g20200214 /usr/local/bin/cmake -S/construction/math/dune-polygongrid/dune-polygongrid-608b915a7c6e7aed072a3d54745699a87e085d51-608b915a7c6e7aed072a3d54745699a87e085d51 -B/construction/math/dune-polygongrid/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/math/dune-polygongrid/.build/CMakeFiles /construction/math/dune-polygongrid/.build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all --- 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dune/polygongrid/CMakeFiles/dunepolygongrid.dir/build --- dune/polygongrid/CMakeFiles/dunepolygongrid.dir/mesh.cc.o --- [ 33%] Building CXX object dune/polygongrid/CMakeFiles/dunepolygongrid.dir/mesh.cc.o cd /construction/math/dune-polygongrid/.build/dune/polygongrid && /usr/bin/c++ -DENABLE_TBB=1 -DHAVE_CONFIG_H -DUG_USE_NEW_DIMENSION_DEFINES -D_TBB_CPP0X -Ddunepolygongrid_EXPORTS -I/construction/math/dune-polygongrid/.build -I/construction/math/dune-polygongrid/dune-polygongrid-608b915a7c6e7aed072a3d54745699a87e085d51-608b915a7c6e7aed072a3d54745699a87e085d51 -isystem /usr/local/include -std=c++17 -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -fPIC -o CMakeFiles/dunepolygongrid.dir/mesh.cc.o -c /construction/math/dune-polygongrid/dune-polygongrid-608b915a7c6e7aed072a3d54745699a87e085d51-608b915a7c6e7aed072a3d54745699a87e085d51/dune/polygongrid/mesh.cc --- lib/libdunepolygongrid.so --- [ 66%] Linking CXX shared library ../../lib/libdunepolygongrid.so cd /construction/math/dune-polygongrid/.build/dune/polygongrid && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/dunepolygongrid.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -std=c++17 -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc8 -L/usr/local/lib/gcc8 -B/usr/local/bin -shared -Wl,-soname,libdunepolygongrid.so -o ../../lib/libdunepolygongrid.so CMakeFiles/dunepolygongrid.dir/mesh.cc.o -Wl,-z,origin,-rpath,/usr/local/lib:/usr/local/mpi/openmpi/lib /usr/local/lib/libdunegrid.so /usr/local/lib/libdunegeometry.so /usr/local/lib/libugS3.so /usr/local/lib/libugS2.so /usr/local/lib/libugL.so /usr/local/lib/libdunecommon.so /usr/local/lib/libopenblas.so -lm -ldl /usr/local/lib/libtbbmalloc.so /usr/local/lib/libtbb.so -pthread /usr/local/mpi/openmpi/lib/libmpi.so [100%] Built target dunepolygongrid /usr/local/bin/cmake -E cmake_progress_start /construction/math/dune-polygongrid/.build/CMakeFiles 0 SUCCEEDED 00:00:04 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> dune-polygongrid-g20200214 depends on file: /usr/local/mpi/openmpi/lib/libmpi.so - found ===> dune-polygongrid-g20200214 depends on executable: gfortran8 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for dune-polygongrid-g20200214 ===> dune-polygongrid-g20200214 depends on file: /usr/local/mpi/openmpi/lib/libmpi.so - found ===> dune-polygongrid-g20200214 depends on executable: gfortran8 - found ===> Generating temporary packing list /usr/local/bin/cmake -S/construction/math/dune-polygongrid/dune-polygongrid-608b915a7c6e7aed072a3d54745699a87e085d51-608b915a7c6e7aed072a3d54745699a87e085d51 -B/construction/math/dune-polygongrid/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/math/dune-polygongrid/.build/CMakeFiles /construction/math/dune-polygongrid/.build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f dune/polygongrid/CMakeFiles/dunepolygongrid.dir/build.make dune/polygongrid/CMakeFiles/dunepolygongrid.dir/depend cd /construction/math/dune-polygongrid/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/math/dune-polygongrid/dune-polygongrid-608b915a7c6e7aed072a3d54745699a87e085d51-608b915a7c6e7aed072a3d54745699a87e085d51 /construction/math/dune-polygongrid/dune-polygongrid-608b915a7c6e7aed072a3d54745699a87e085d51-608b915a7c6e7aed072a3d54745699a87e085d51/dune/polygongrid /construction/math/dune-polygongrid/.build /construction/math/dune-polygongrid/.build/dune/polygongrid /construction/math/dune-polygongrid/.build/dune/polygongrid/CMakeFiles/dunepolygongrid.dir/DependInfo.cmake /usr/bin/make -f dune/polygongrid/CMakeFiles/dunepolygongrid.dir/build.make dune/polygongrid/CMakeFiles/dunepolygongrid.dir/build [100%] Built target dunepolygongrid /usr/local/bin/cmake -E cmake_progress_start /construction/math/dune-polygongrid/.build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall /usr/bin/make -f dune/polygongrid/CMakeFiles/dunepolygongrid.dir/build.make dune/polygongrid/CMakeFiles/dunepolygongrid.dir/preinstall Linking CXX shared library CMakeFiles/CMakeRelink.dir/libdunepolygongrid.so cd /construction/math/dune-polygongrid/.build/dune/polygongrid && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/dunepolygongrid.dir/relink.txt --verbose=1 /usr/bin/c++ -fPIC -std=c++17 -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc8 -L/usr/local/lib/gcc8 -B/usr/local/bin -shared -Wl,-soname,libdunepolygongrid.so -o CMakeFiles/CMakeRelink.dir/libdunepolygongrid.so CMakeFiles/dunepolygongrid.dir/mesh.cc.o -Wl,-z,origin,-rpath,/usr/local/lib:/usr/local/mpi/openmpi/lib /usr/local/lib/libdunegrid.so /usr/local/lib/libdunegeometry.so /usr/local/lib/libugS3.so /usr/local/lib/libugS2.so /usr/local/lib/libugL.so /usr/local/lib/libdunecommon.so /usr/local/lib/libopenblas.so -lm -ldl /usr/local/lib/libtbbmalloc.so /usr/local/lib/libtbb.so -pthread /usr/local/mpi/openmpi/lib/libmpi.so Installing the project stripped... /usr/local/bin/cmake -DCMAKE_INSTALL_DO_STRIP=1 -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /construction/math/dune-polygongrid/stage/usr/local/lib/dunecontrol/dune-polygongrid/dune.module -- Installing: /construction/math/dune-polygongrid/stage/usr/local/lib/cmake/dune-polygongrid/dune-polygongrid-config.cmake -- Installing: /construction/math/dune-polygongrid/stage/usr/local/lib/cmake/dune-polygongrid/dune-polygongrid-config-version.cmake -- Installing: /construction/math/dune-polygongrid/stage/usr/local/lib/pkgconfig/dune-polygongrid.pc -- Installing: /construction/math/dune-polygongrid/stage/usr/local/share/dune/cmake/modules/DunePolygongridMacros.cmake -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/capabilities.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/declaration.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/dgf.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/entity.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/entityiterator.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/entityseed.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/geometry.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/grid.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/gridfamily.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/gridfactory.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/gridview.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/idset.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/identitymatrix.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/indexset.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/intersection.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/iteratortags.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/mesh.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/meshobjects.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/multivector.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/include/dune/polygongrid/subentity.hh -- Installing: /construction/math/dune-polygongrid/stage/usr/local/lib/libdunepolygongrid.so -- Installing: /construction/math/dune-polygongrid/stage/usr/local/lib/cmake/dune-polygongrid/dune-polygongrid-targets.cmake -- Installing: /construction/math/dune-polygongrid/stage/usr/local/lib/cmake/dune-polygongrid/dune-polygongrid-targets-release.cmake ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Error: /usr/local/lib/libdunepolygongrid.so is linked to /usr/local/lib/libhwloc.so.15 from devel/hwloc2 but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libhwloc.so:devel/hwloc2 Error: /usr/local/lib/libdunepolygongrid.so is linked to /usr/local/lib/libevent_core-2.1.so.7 from devel/libevent but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libevent_core-2.1.so:devel/libevent Error: /usr/local/lib/libdunepolygongrid.so is linked to /usr/local/lib/libevent_pthreads-2.1.so.7 from devel/libevent but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libevent_pthreads-2.1.so:devel/libevent Error: /usr/local/lib/libdunepolygongrid.so is linked to /usr/local/lib/libpciaccess.so.0 from devel/libpciaccess but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libpciaccess.so:devel/libpciaccess Error: /usr/local/lib/libdunepolygongrid.so is linked to /usr/local/lib/libxml2.so.2 from textproc/libxml2 but it is not declared as a dependency Warning: you need USE_GNOME+=libxml2 Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:03 ------------------------------------------------------------------------------- -- Phase: check-plist ------------------------------------------------------------------------------- ====> Checking for pkg-plist issues (check-plist) ===> Parsing plist ===> Checking for items in STAGEDIR missing from pkg-plist ===> Checking for items in pkg-plist which are not in STAGEDIR ===> No pkg-plist issues found (check-plist) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for dune-polygongrid-g20200214 file sizes/checksums [28]: 0% file sizes/checksums [28]: 100% packing files [28]: 0% packing files [28]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:01 TOTAL TIME 00:02:15