=> Building science/py-pymatgen@py37 Started : Saturday, 15 FEB 2020 at 10:30:04 UTC Platform: 5.7-DEVELOPMENT DragonFly v5.7.0.1432.g9cd86-DEVELOPMENT #23: Thu Feb 13 14:43:04 PST 2020 root@sting.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.7-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.7-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- PYTHON="/usr/local/bin/python3.7" XDG_DATA_HOME=/construction/science/py-pymatgen XDG_CONFIG_HOME=/construction/science/py-pymatgen HOME=/construction/science/py-pymatgen TMPDIR="/tmp" PATH=/construction/science/py-pymatgen/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/science/py-pymatgen XDG_CONFIG_HOME=/construction/science/py-pymatgen HOME=/construction/science/py-pymatgen TMPDIR="/tmp" PATH=/construction/science/py-pymatgen/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/science/py-pymatgen/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PYTHON_INCLUDEDIR=include/python3.7m PYTHON_LIBDIR=lib/python3.7 PYTHON_PLATFORM=dragonfly5 PYTHON_SITELIBDIR=lib/python3.7/site-packages PYTHON_SUFFIX=37 PYTHON_VER=3.7 PYTHON_VERSION=python3.7 PYTHON2="@comment " PYTHON3="" OSREL=5.7 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/py37-pymatgen" EXAMPLESDIR="share/examples/py37-pymatgen" DATADIR="share/py37-pymatgen" WWWDIR="www/py37-pymatgen" ETCDIR="etc/py37-pymatgen" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/py37-pymatgen DOCSDIR=/usr/local/share/doc/py37-pymatgen EXAMPLESDIR=/usr/local/share/examples/py37-pymatgen WWWDIR=/usr/local/www/py37-pymatgen ETCDIR=/usr/local/etc/py37-pymatgen -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=LiveSystem USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=15 DPORTS_BUILDER= yes DISABLE_LICENSES= yes DEFAULT_VERSIONS= ssl=openssl FORCE_PACKAGE= yes DEVELOPER= yes HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _PERL5_FROM_BIN=5.30.1 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=32 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500709 OSVERSION=9999999 OSREL=5.7 _OSRELEASE=5.7-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> py37-pymatgen-2019.10.16 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.12.0_1.txz Installing pkg-1.12.0_1... Extracting pkg-1.12.0_1: .......... done ===> py37-pymatgen-2019.10.16 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py37-pymatgen-2019.10.16 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- => pymatgen-2019.10.16.tar.gz doesn't seem to exist in /distfiles/. => Attempting to fetch https://files.pythonhosted.org/packages/source/p/pymatgen/pymatgen-2019.10.16.tar.gz pymatgen-2019.10.16.tar.gz 2428 kB 35 MBps 00s ===> Fetching all distfiles required by py37-pymatgen-2019.10.16 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> Fetching all distfiles required by py37-pymatgen-2019.10.16 for building => SHA256 Checksum OK for pymatgen-2019.10.16.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> Fetching all distfiles required by py37-pymatgen-2019.10.16 for building ===> Extracting for py37-pymatgen-2019.10.16 => SHA256 Checksum OK for pymatgen-2019.10.16.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for py37-pymatgen-2019.10.16 ===> Applying ports patches for py37-pymatgen-2019.10.16 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> py37-pymatgen-2019.10.16 depends on package: py37-numpy>=1.15,1<1.19,1 - not found ===> Installing existing package /packages/All/py37-numpy-1.16.5_4,1.txz Installing py37-numpy-1.16.5_4,1... `-- Installing gcc8-8.3.0_3... | `-- Installing binutils-2.33.1_2,1... | | `-- Installing gettext-runtime-0.20.1... | | `-- Installing indexinfo-0.3.1... | | `-- Extracting indexinfo-0.3.1: . done | | `-- Extracting gettext-runtime-0.20.1: .......... done | `-- Extracting binutils-2.33.1_2,1: .......... done | `-- Installing gmp-6.1.2_1... | `-- Extracting gmp-6.1.2_1: .......... done | `-- Installing mpc-1.1.0_2... | | `-- Installing mpfr-4.0.2... | | `-- Extracting mpfr-4.0.2: .......... done | `-- Extracting mpc-1.1.0_2: ...... done `-- Extracting gcc8-8.3.0_3: .......... done `-- Installing openblas-0.3.7_2,1... `-- Extracting openblas-0.3.7_2,1: .......... done `-- Installing py37-setuptools-44.0.0... | `-- Installing python37-3.7.6... | | `-- Installing expat-2.2.8... | | `-- Extracting expat-2.2.8: .......... done | | `-- Installing libffi-3.2.1_3... | | `-- Extracting libffi-3.2.1_3: .......... done | | `-- Installing ncurses-6.1.20190525... | | `-- Extracting ncurses-6.1.20190525: .......... done | | `-- Installing openssl-1.1.1d,1... | | `-- Extracting openssl-1.1.1d,1: .......... done | | `-- Installing readline-8.0.1... | | `-- Extracting readline-8.0.1: .......... done | `-- Extracting python37-3.7.6: .......... done `-- Extracting py37-setuptools-44.0.0: .......... done `-- Installing suitesparse-5.4.0_5... | `-- Installing metis-5.1.0_8... | `-- Extracting metis-5.1.0_8: .......... done | `-- Installing tbb-2020.1... | `-- Extracting tbb-2020.1: .......... done `-- Extracting suitesparse-5.4.0_5: .......... done Extracting py37-numpy-1.16.5_4,1: .......... done ===== Message from gcc8-8.3.0_3: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from python37-3.7.6: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py37-gdbm databases/py-gdbm@py37 py37-sqlite3 databases/py-sqlite3@py37 py37-tkinter x11-toolkits/py-tkinter@py37 ===> py37-pymatgen-2019.10.16 depends on package: py37-numpy>=1.15,1<1.19,1 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-setuptools>0 - found ===> py37-pymatgen-2019.10.16 depends on file: /usr/local/bin/python3.7 - found -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for py37-pymatgen-2019.10.16 running config -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for py37-pymatgen-2019.10.16 running build running build_py creating build creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7 creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen copying pymatgen/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen copying pymatgen/dao.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/feff_plot_dos.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/pmg_plot.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/feff_plot_cross_section.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/pmg_config.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/pmg_analyze.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/feff_input_generation.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/pmg_structure.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/pmg.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/gaussian_analyzer.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/get_environment.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/pmg_potcar.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli copying pymatgen/cli/pmg_query.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry copying pymatgen/symmetry/bandstructure.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry copying pymatgen/symmetry/site_symmetries.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry copying pymatgen/symmetry/settings.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry copying pymatgen/symmetry/analyzer.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry copying pymatgen/symmetry/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry copying pymatgen/symmetry/groups.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry copying pymatgen/symmetry/structure.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry copying pymatgen/symmetry/maggroups.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util copying pymatgen/util/plotting.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util copying pymatgen/util/string.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util copying pymatgen/util/testing.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util copying pymatgen/util/provenance.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util copying pymatgen/util/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util copying pymatgen/util/io_utils.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util copying pymatgen/util/sequence.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util copying pymatgen/util/coord.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util copying pymatgen/util/num.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util copying pymatgen/util/convergence.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util copying pymatgen/util/typing.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util copying pymatgen/util/serialization.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/vis copying pymatgen/vis/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/vis copying pymatgen/vis/structure_chemview.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/vis copying pymatgen/vis/structure_vtk.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/vis copying pymatgen/vis/plotters.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/vis creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/alchemy copying pymatgen/alchemy/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/alchemy copying pymatgen/alchemy/materials.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/alchemy copying pymatgen/alchemy/filters.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/alchemy copying pymatgen/alchemy/transmuters.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/alchemy creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/aiida.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/pwscf.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/babel.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/fiesta.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/lmto.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/adf.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/phonopy.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/shengbte.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/gaussian.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/xyz.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/atat.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/cif.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/nwchem.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/prismatic.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/xcrysden.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/cssr.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/lobster.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/xr.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/ase.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/io/zeopp.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/ext copying pymatgen/ext/cod.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/ext copying pymatgen/ext/crystalsai.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/ext copying pymatgen/ext/matproj.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/ext copying pymatgen/ext/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/ext copying pymatgen/ext/jhu.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/ext creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line copying pymatgen/command_line/critic2_caller.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line copying pymatgen/command_line/bader_caller.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line copying pymatgen/command_line/vampire_caller.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line copying pymatgen/command_line/gulp_caller.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line copying pymatgen/command_line/aconvasp_caller.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line copying pymatgen/command_line/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line copying pymatgen/command_line/mcsqs_caller.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line copying pymatgen/command_line/enumlib_caller.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization copying pymatgen/optimization/linear_assignment_numpy.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization copying pymatgen/optimization/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries copying pymatgen/entries/compatibility.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries copying pymatgen/entries/entry_tools.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries copying pymatgen/entries/computed_entries.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries copying pymatgen/entries/exp_entries.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries copying pymatgen/entries/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/tensors.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/xcfunc.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/trajectory.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/surface.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/sites.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/periodic_table.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/bonds.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/lattice.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/composition.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/molecular_orbitals.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/spectrum.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/libxcfunc.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/ion.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/operations.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/units.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/structure.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/local_env.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/diffusion_analyzer.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/phase_diagram.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/substrate_analyzer.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/reaction_calculator.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/pourbaix_diagram.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/structure_matcher.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/molecule_structure_comparator.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/molecule_matcher.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/wulff.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/interface_reactions.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/nmr.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/graphs.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/piezo.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/structure_analyzer.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/fragmenter.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/dimensionality.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/energy_models.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/piezo_sensitivity.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/quasiharmonic.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/bond_dissociation.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/ewald.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/transition_state.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/excitation.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/surface_analysis.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/functional_groups.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/thermochemistry.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/eos.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/aflow_prototypes.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/path_finder.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/interface.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/adsorption.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/bond_valence.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/find_dimension.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure copying pymatgen/electronic_structure/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure copying pymatgen/electronic_structure/boltztrap.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure copying pymatgen/electronic_structure/dos.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure copying pymatgen/electronic_structure/plotter.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure copying pymatgen/electronic_structure/bandstructure.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure copying pymatgen/electronic_structure/boltztrap2.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure copying pymatgen/electronic_structure/core.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure copying pymatgen/electronic_structure/cohp.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations copying pymatgen/transformations/defect_transformations.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations copying pymatgen/transformations/site_transformations.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations copying pymatgen/transformations/standard_transformations.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations copying pymatgen/transformations/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations copying pymatgen/transformations/advanced_transformations.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations copying pymatgen/transformations/transformation_abc.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps copying pymatgen/apps/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/phonon copying pymatgen/phonon/ir_spectra.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/phonon copying pymatgen/phonon/dos.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/phonon copying pymatgen/phonon/bandstructure.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/phonon copying pymatgen/phonon/plotter.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/phonon copying pymatgen/phonon/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/phonon creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/qchem copying pymatgen/io/qchem/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/qchem copying pymatgen/io/qchem/sets.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/qchem copying pymatgen/io/qchem/outputs.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/qchem copying pymatgen/io/qchem/utils.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/qchem copying pymatgen/io/qchem/inputs.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/qchem creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps copying pymatgen/io/lammps/data.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps copying pymatgen/io/lammps/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps copying pymatgen/io/lammps/utils.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps copying pymatgen/io/lammps/inputs.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps copying pymatgen/io/lammps/outputs.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp copying pymatgen/io/vasp/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp copying pymatgen/io/vasp/inputs.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp copying pymatgen/io/vasp/sets.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp copying pymatgen/io/vasp/outputs.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff copying pymatgen/io/feff/outputs.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff copying pymatgen/io/feff/inputs.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff copying pymatgen/io/feff/sets.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff copying pymatgen/io/feff/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit copying pymatgen/io/abinit/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit copying pymatgen/io/abinit/helpers.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit copying pymatgen/io/abinit/inputs.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit copying pymatgen/io/abinit/abiobjects.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit copying pymatgen/io/abinit/pseudos.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit copying pymatgen/io/abinit/abiinspect.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit copying pymatgen/io/abinit/abitimer.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit copying pymatgen/io/abinit/netcdf.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit copying pymatgen/io/abinit/variable.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/exciting copying pymatgen/io/exciting/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/exciting copying pymatgen/io/exciting/inputs.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/exciting creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/cost copying pymatgen/analysis/cost/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/cost copying pymatgen/analysis/cost/cost.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/cost creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/magnetism copying pymatgen/analysis/magnetism/jahnteller.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/magnetism copying pymatgen/analysis/magnetism/analyzer.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/magnetism copying pymatgen/analysis/magnetism/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/magnetism copying pymatgen/analysis/magnetism/heisenberg.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/magnetism creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv copying pymatgen/analysis/chemenv/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction copying pymatgen/analysis/structure_prediction/substitutor.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction copying pymatgen/analysis/structure_prediction/dopant_predictor.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction copying pymatgen/analysis/structure_prediction/substitution_probability.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction copying pymatgen/analysis/structure_prediction/volume_predictor.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction copying pymatgen/analysis/structure_prediction/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/elasticity copying pymatgen/analysis/elasticity/elastic.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/elasticity copying pymatgen/analysis/elasticity/strain.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/elasticity copying pymatgen/analysis/elasticity/stress.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/elasticity copying pymatgen/analysis/elasticity/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/elasticity creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/gb copying pymatgen/analysis/gb/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/gb copying pymatgen/analysis/gb/grain.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/gb creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction copying pymatgen/analysis/diffraction/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction copying pymatgen/analysis/diffraction/neutron.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction copying pymatgen/analysis/diffraction/core.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction copying pymatgen/analysis/diffraction/xrd.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/ferroelectricity copying pymatgen/analysis/ferroelectricity/polarization.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/ferroelectricity copying pymatgen/analysis/ferroelectricity/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/ferroelectricity creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/hhi copying pymatgen/analysis/hhi/hhi.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/hhi copying pymatgen/analysis/hhi/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/hhi creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects copying pymatgen/analysis/defects/defect_compatibility.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects copying pymatgen/analysis/defects/corrections.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects copying pymatgen/analysis/defects/utils.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects copying pymatgen/analysis/defects/core.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects copying pymatgen/analysis/defects/dilute_solution_model.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects copying pymatgen/analysis/defects/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects copying pymatgen/analysis/defects/thermodynamics.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects copying pymatgen/analysis/defects/generators.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/xas copying pymatgen/analysis/xas/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/xas copying pymatgen/analysis/xas/spectrum.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/xas creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments copying pymatgen/analysis/chemenv/coordination_environments/voronoi.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometry_finder.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments copying pymatgen/analysis/chemenv/coordination_environments/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments copying pymatgen/analysis/chemenv/coordination_environments/chemenv_strategies.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments copying pymatgen/analysis/chemenv/coordination_environments/structure_environments.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils copying pymatgen/analysis/chemenv/utils/scripts_utils.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils copying pymatgen/analysis/chemenv/utils/math_utils.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils copying pymatgen/analysis/chemenv/utils/chemenv_config.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils copying pymatgen/analysis/chemenv/utils/chemenv_errors.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils copying pymatgen/analysis/chemenv/utils/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils copying pymatgen/analysis/chemenv/utils/defs_utils.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils copying pymatgen/analysis/chemenv/utils/func_utils.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils copying pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/strategy_files copying pymatgen/analysis/chemenv/coordination_environments/strategy_files/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/strategy_files creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery copying pymatgen/apps/battery/insertion_battery.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery copying pymatgen/apps/battery/conversion_battery.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery copying pymatgen/apps/battery/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery copying pymatgen/apps/battery/battery_abc.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery copying pymatgen/apps/battery/plotter.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery copying pymatgen/apps/battery/analyzer.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/borg copying pymatgen/apps/borg/hive.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/borg copying pymatgen/apps/borg/queen.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/borg copying pymatgen/apps/borg/__init__.py -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/borg copying pymatgen/symmetry/symm_ops.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry copying pymatgen/symmetry/symm_data.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry copying pymatgen/symmetry/symm_ops.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry copying pymatgen/symmetry/symm_data.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry copying pymatgen/symmetry/symm_data_magnetic.sqlite -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/Graphite.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/He_BCC.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/SrTiO3.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/Li2O.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/Sn.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/Li3V2(PO4)3.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/Si.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/TlBiSe2.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/Pb2TiZrO6.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/Li2O2.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/BaNiO3.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/CsCl.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/K2O2.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/TiO2.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/NaFePO4.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/Li10GeP2S12.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/LiFePO4.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/VO2.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/util/structures/SiO2.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures copying pymatgen/vis/ElementColorSchemes.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/vis copying pymatgen/io/BASIS_PBE_54.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io copying pymatgen/command_line/OxideTersoffPotentials -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line copying pymatgen/entries/MPCompatibility.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries copying pymatgen/entries/MITCompatibility.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries copying pymatgen/core/reconstructions_archive.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/bond_lengths.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/periodic_table.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/func_groups.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/quad_data.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/core/libxc_docs.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core copying pymatgen/analysis/cn_opt_params.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/bonds_jmol_ob.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/op_params.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/bvparam_1991.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/icsd_bv.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/vesta_cutoffs.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/aflow_prototypes.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis copying pymatgen/analysis/ionic_radii.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps/templates copying pymatgen/io/lammps/templates/md.txt -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps/templates copying pymatgen/io/vasp/MVLGWSet.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp copying pymatgen/io/vasp/MPRelaxSet.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp copying pymatgen/io/vasp/VASPIncarBase.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp copying pymatgen/io/vasp/MVLRelax52Set.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp copying pymatgen/io/vasp/MITRelaxSet.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp copying pymatgen/io/vasp/vdW_parameters.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp copying pymatgen/io/vasp/MPHSERelaxSet.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp copying pymatgen/io/vasp/incar_parameters.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp copying pymatgen/io/feff/MPEXAFSSet.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff copying pymatgen/io/feff/MPELNESSet.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff copying pymatgen/io/feff/MPEXELFSSet.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff copying pymatgen/io/feff/MPXANESSet.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff copying pymatgen/analysis/cost/costdb_elements.csv -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/cost copying pymatgen/analysis/magnetism/default_magmoms.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/magnetism creating build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction/data copying pymatgen/analysis/structure_prediction/data/lambda.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction/data copying pymatgen/analysis/structure_prediction/data/pair_correlation.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction/data copying pymatgen/analysis/structure_prediction/DLS_bond_params.yaml -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction copying pymatgen/analysis/diffraction/atomic_scattering_params.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction copying pymatgen/analysis/diffraction/neutron_scattering_length.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction copying pymatgen/analysis/hhi/hhi_data.csv -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/hhi copying pymatgen/analysis/chemenv/coordination_environments/strategy_files/ImprovedConfidenceCutoffDefaultParameters.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/strategy_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/allcg.txt -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TI#9.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_3#8.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#6.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_1#9.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SY#4.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#10.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#1.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBSA#10.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#4.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PB#7.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ET#7.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_2#9.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_3#9.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#20.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#9.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_3#9.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HD#9.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PBP#12.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_1#10.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBT#8.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ST#7.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TL#3.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TS#3.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TC#9.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/L#2.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBSA#10.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#8.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_2#10.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#11.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#5.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#10.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HA#12.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#8.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DI#11.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DDPN#8.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#4.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6_explicit.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#5.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#10.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HP#12.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/I#12.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#12.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PA#10.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/MI#10.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#4.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/FO#7.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT#12.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBT#8.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SMA#9.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_1#9.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#11.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_1#8.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/CO#11.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TY#3.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/AC#12.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SA#8.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PCPA#11.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_2#9.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#13.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#6.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HB#8.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#5.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/A#2.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_2#8.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#12.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SC#12.json -> build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files running build_ext building 'pymatgen.optimization.linear_assignment' extension creating build/temp.dragonfly-5.7-SYNTH-x86_64-3.7 creating build/temp.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen creating build/temp.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/include/python3.7m -I/usr/local/lib/python3.7/site-packages/numpy/core/include -c pymatgen/optimization/linear_assignment.c -o build/temp.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization/linear_assignment.o In file included from /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from pymatgen/optimization/linear_assignment.c:569: /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization/linear_assignment.o -L/usr/local/lib -lpython3.7m -o build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization/linear_assignment.so building 'pymatgen.util.coord_cython' extension creating build/temp.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/include/python3.7m -I/usr/local/lib/python3.7/site-packages/numpy/core/include -c pymatgen/util/coord_cython.c -o build/temp.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/coord_cython.o In file included from /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from pymatgen/util/coord_cython.c:569: /usr/local/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ cc -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/coord_cython.o -L/usr/local/lib -lpython3.7m -o build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/coord_cython.so building 'pymatgen.optimization.neighbors' extension cc -Wno-unused-result -Wsign-compare -DNDEBUG -pipe -I/usr/local/include -I/usr/local/include/ncurses -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -fPIC -I/usr/local/include/python3.7m -I/usr/local/lib/python3.7/site-packages/numpy/core/include -c pymatgen/optimization/neighbors.cpp -o build/temp.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization/neighbors.o -Wno-cpp -Wno-unused-function -O2 -std=c++11 c++ -shared -pipe -O2 -fno-strict-aliasing build/temp.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization/neighbors.o -L/usr/local/lib -lpython3.7m -o build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization/neighbors.so -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> py37-pymatgen-2019.10.16 depends on package: py37-numpy>=1.15,1<1.19,1 - found ===> py37-pymatgen-2019.10.16 depends on package: py37-matplotlib>=1.5 - not found ===> Installing existing package /packages/All/py37-matplotlib-2.2.4_1.txz Installing py37-matplotlib-2.2.4_1... `-- Installing fontconfig-2.12.6,1... | `-- Installing freetype2-2.10.1... | `-- Extracting freetype2-2.10.1: .......... done `-- Extracting fontconfig-2.12.6,1: .......... done Running fc-cache to build fontconfig cache... /usr/local/share/fonts: skipping, no such directory /usr/local/lib/X11/fonts: skipping, no such directory /var/db/fontconfig: cleaning cache directory fc-cache: succeeded `-- Installing png-1.6.37... `-- Extracting png-1.6.37: .......... done `-- Installing py37-cycler-0.10.0... | `-- Installing py37-six-1.14.0... | `-- Extracting py37-six-1.14.0: ....... done `-- Extracting py37-cycler-0.10.0: ........ done `-- Installing py37-dateutil-2.8.0... `-- Extracting py37-dateutil-2.8.0: .......... done `-- Installing py37-kiwisolver-1.1.0... `-- Extracting py37-kiwisolver-1.1.0: ...... done `-- Installing py37-pyparsing-2.4.6... `-- Extracting py37-pyparsing-2.4.6: ....... done `-- Installing py37-pytz-2019.3,1... `-- Extracting py37-pytz-2019.3,1: .......... done `-- Installing py37-tkinter-3.7.6_6... | `-- Installing tcl86-8.6.10... | `-- Extracting tcl86-8.6.10: .......... done | `-- Installing tk86-8.6.10_1... | | `-- Installing libX11-1.6.9,1... | | `-- Installing libXau-1.0.9... | | `-- Extracting libXau-1.0.9: .......... done | | `-- Installing libXdmcp-1.1.3... | | | `-- Installing xorgproto-2019.2... | | | `-- Extracting xorgproto-2019.2: .......... done | | `-- Extracting libXdmcp-1.1.3: ...... done | | `-- Installing libxcb-1.13.1... | | | `-- Installing libpthread-stubs-0.4... | | | `-- Extracting libpthread-stubs-0.4: .... done | | | `-- Installing libxml2-2.9.10... | | | `-- Extracting libxml2-2.9.10: .......... done | | `-- Extracting libxcb-1.13.1: .......... done | | `-- Extracting libX11-1.6.9,1: .......... done | | `-- Installing libXScrnSaver-1.2.3_2... | | `-- Installing libXext-1.3.4,1... | | `-- Extracting libXext-1.3.4,1: .......... done | | `-- Extracting libXScrnSaver-1.2.3_2: .......... done | | `-- Installing libXft-2.3.3... | | `-- Installing libXrender-0.9.10_2... | | `-- Extracting libXrender-0.9.10_2: ....... done | | `-- Extracting libXft-2.3.3: ......... done | `-- Extracting tk86-8.6.10_1: .......... done `-- Extracting py37-tkinter-3.7.6_6: ..... done `-- Installing py37-tornado-5.1.1... `-- Extracting py37-tornado-5.1.1: .......... done Extracting py37-matplotlib-2.2.4_1: .......... done ===== Message from freetype2-2.10.1: -- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. If LONG_PCF_NAMES port's option was enabled, the PCF family names may include the foundry and information whether they contain wide characters. For example, "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at run time with using pcf:no-long-family-names property, if needed. Example: FREETYPE_PROPERTIES=pcf:no-long-family-names=1 How to recreate fontconfig cache with using such environment variable, if needed: # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/site/index.html, if documentation was installed). ===> py37-pymatgen-2019.10.16 depends on package: py37-matplotlib>=1.5 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-monty>=3.0.2 - not found ===> Installing existing package /packages/All/py37-monty-3.0.2.txz Installing py37-monty-3.0.2... Extracting py37-monty-3.0.2: .......... done ===> py37-pymatgen-2019.10.16 depends on package: py37-monty>=3.0.2 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-networkx>=2.2 - not found ===> Installing existing package /packages/All/py37-networkx-2.1,1.txz Installing py37-networkx-2.1,1... `-- Installing py37-decorator-4.3.0... `-- Extracting py37-decorator-4.3.0: ......... done `-- Installing py37-pygraphviz-1.5... | `-- Installing graphviz-2.42.3... | | `-- Installing cairo-1.16.0,2... | | `-- Installing glib-2.56.3_7,1... | | | `-- Installing libiconv-1.14_11... | | | `-- Extracting libiconv-1.14_11: .......... done | | | `-- Installing pcre-8.43_2... | | | `-- Extracting pcre-8.43_2: .......... done | | `-- Extracting glib-2.56.3_7,1: .......... done No schema files found: doing nothing. | | `-- Installing mesa-libs-18.3.2_3... | | | `-- Installing libXdamage-1.1.5... | | | `-- Installing libXfixes-5.0.3_2... | | | `-- Extracting libXfixes-5.0.3_2: ....... done | | | `-- Extracting libXdamage-1.1.5: ...... done | | | `-- Installing libXrandr-1.5.2... | | | `-- Extracting libXrandr-1.5.2: .......... done | | | `-- Installing libXxf86vm-1.1.4_3... | | | `-- Extracting libXxf86vm-1.1.4_3: .......... done | | | `-- Installing libdrm-2.4.100... | | | `-- Installing libpciaccess-0.16... | | | | `-- Installing pciids-20200125... | | | | `-- Extracting pciids-20200125: ..... done | | | `-- Extracting libpciaccess-0.16: ...... done | | | `-- Extracting libdrm-2.4.100: .......... done | | | `-- Installing libelf-0.8.13_3... | | | `-- Extracting libelf-0.8.13_3: .......... done | | | `-- Installing libxshmfence-1.3... | | | `-- Extracting libxshmfence-1.3: ...... done | | | `-- Installing wayland-1.16.0... | | | `-- Extracting wayland-1.16.0: .......... done | | `-- Extracting mesa-libs-18.3.2_3: .......... done | | `-- Installing pixman-0.38.4... | | `-- Extracting pixman-0.38.4: ....... done | | `-- Extracting cairo-1.16.0,2: .......... done | | `-- Installing jpeg-turbo-2.0.4... | | `-- Extracting jpeg-turbo-2.0.4: .......... done | | `-- Installing libICE-1.0.10,1... | | `-- Extracting libICE-1.0.10,1: .......... done | | `-- Installing libSM-1.2.3,1... | | `-- Extracting libSM-1.2.3,1: ........ done | | `-- Installing libXaw-1.0.13_3,2... | | `-- Installing libXmu-1.1.3,1... | | | `-- Installing libXt-1.2.0,1... | | | `-- Extracting libXt-1.2.0,1: .......... done | | `-- Extracting libXmu-1.1.3,1: .......... done | | `-- Installing libXpm-3.5.12_2... | | `-- Extracting libXpm-3.5.12_2: .......... done | | `-- Extracting libXaw-1.0.13_3,2: .......... done | | `-- Installing libgd-2.2.5_2,1... | | `-- Installing tiff-4.1.0... | | | `-- Installing jbigkit-2.1_1... | | | `-- Extracting jbigkit-2.1_1: .......... done | | `-- Extracting tiff-4.1.0: .......... done | | `-- Installing webp-1.1.0... | | | `-- Installing giflib-5.2.1... | | | `-- Extracting giflib-5.2.1: .......... done | | `-- Extracting webp-1.1.0: .......... done | | `-- Extracting libgd-2.2.5_2,1: .......... done | | `-- Installing libltdl-2.4.6... | | `-- Extracting libltdl-2.4.6: ......... done | | `-- Installing pango-1.42.4_3... | | `-- Installing encodings-1.0.5,1... | | `-- Extracting encodings-1.0.5,1: .......... done | | `-- Installing fribidi-0.19.7... | | `-- Extracting fribidi-0.19.7: .......... done | | `-- Installing harfbuzz-2.6.4... | | | `-- Installing graphite2-1.3.13_1... | | | `-- Extracting graphite2-1.3.13_1: .......... done | | `-- Extracting harfbuzz-2.6.4: .......... done | | `-- Installing xorg-fonts-truetype-7.7_1... | | | `-- Installing dejavu-2.37_1... | | | `-- Installing mkfontscale-1.2.1... | | | | `-- Installing libfontenc-1.1.4... | | | | `-- Extracting libfontenc-1.1.4: ...... done | | | `-- Extracting mkfontscale-1.2.1: .... done | | | `-- Extracting dejavu-2.37_1: .......... done | | | `-- Installing font-bh-ttf-1.0.3_4... | | | `-- Extracting font-bh-ttf-1.0.3_4: .......... done | | | `-- Installing font-misc-ethiopic-1.0.3_4... | | | `-- Extracting font-misc-ethiopic-1.0.3_4: ... done | | | `-- Installing font-misc-meltho-1.0.3_4... | | | `-- Extracting font-misc-meltho-1.0.3_4: .......... done | | `-- Extracting pango-1.42.4_3: .......... done | `-- Extracting graphviz-2.42.3: .......... done `-- Extracting py37-pygraphviz-1.5: .......... done `-- Installing py37-scikit-sparse-0.4.4_3... | `-- Installing py37-scipy-1.2.2_1... | `-- Extracting py37-scipy-1.2.2_1: .......... done `-- Extracting py37-scikit-sparse-0.4.4_3: .......... done `-- Installing py37-yaml-5.2... `-- Extracting py37-yaml-5.2: .......... done Extracting py37-networkx-2.1,1: .......... done ===== Message from dejavu-2.37_1: -- Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. ===> py37-pymatgen-2019.10.16 depends on package: py37-networkx>=2.2 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-palettable>=3.1.1 - not found ===> Installing existing package /packages/All/py37-palettable-3.3.0.txz Installing py37-palettable-3.3.0... Extracting py37-palettable-3.3.0: .......... done ===> py37-pymatgen-2019.10.16 depends on package: py37-palettable>=3.1.1 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-pandas>0 - not found ===> Installing existing package /packages/All/py37-pandas-0.24.2_1,1.txz Installing py37-pandas-0.24.2_1,1... `-- Installing py37-bottleneck-1.3.1... `-- Extracting py37-bottleneck-1.3.1: .......... done `-- Installing py37-numexpr-2.7.1... `-- Extracting py37-numexpr-2.7.1: .......... done `-- Installing py37-sqlite3-3.7.6_7... | `-- Installing sqlite3-3.30.1,1... | `-- Extracting sqlite3-3.30.1,1: ......... done `-- Extracting py37-sqlite3-3.7.6_7: ..... done Extracting py37-pandas-0.24.2_1,1: .......... done ===== Message from py37-pandas-0.24.2_1,1: -- Install math/py-statsmodels to enable parts of pandas.stats. Install devel/py-xarray to enable the to_xarray() function. ===> py37-pymatgen-2019.10.16 depends on package: py37-pandas>0 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-pydispatcher>=2.0.5 - not found ===> Installing existing package /packages/All/py37-pydispatcher-2.0.5.txz Installing py37-pydispatcher-2.0.5... Extracting py37-pydispatcher-2.0.5: .......... done ===> py37-pymatgen-2019.10.16 depends on package: py37-pydispatcher>=2.0.5 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-requests>0 - not found ===> Installing existing package /packages/All/py37-requests-2.22.0.txz Installing py37-requests-2.22.0... `-- Installing py37-certifi-2019.11.28... `-- Extracting py37-certifi-2019.11.28: .......... done `-- Installing py37-chardet-3.0.4_3... `-- Extracting py37-chardet-3.0.4_3: .......... done `-- Installing py37-idna-2.8... `-- Extracting py37-idna-2.8: .......... done `-- Installing py37-urllib3-1.25.7,1... | `-- Installing py37-cryptography-2.6.1... | | `-- Installing py37-asn1crypto-0.24.0... | | `-- Extracting py37-asn1crypto-0.24.0: .......... done | | `-- Installing py37-cffi-1.14.0... | | `-- Installing py37-pycparser-2.19... | | `-- Extracting py37-pycparser-2.19: .......... done | | `-- Extracting py37-cffi-1.14.0: .......... done | `-- Extracting py37-cryptography-2.6.1: .......... done | `-- Installing py37-openssl-19.0.0... | `-- Extracting py37-openssl-19.0.0: .......... done | `-- Installing py37-pysocks-1.7.1... | `-- Extracting py37-pysocks-1.7.1: .......... done `-- Extracting py37-urllib3-1.25.7,1: .......... done Extracting py37-requests-2.22.0: .......... done ===== Message from py37-urllib3-1.25.7,1: -- Since version 1.25 HTTPS connections are now verified by default which is done via "cert_reqs = 'CERT_REQUIRED'". While certificate verification can be disabled via "cert_reqs = 'CERT_NONE'", it's highly recommended to leave it on. Various consumers of net/py-urllib3 already have implemented routines that either explicitly enable or disable HTTPS certificate verification (e.g. via configuration settings, CLI arguments, etc.). Yet it may happen that there are still some consumers which don't explicitly enable/disable certificate verification for HTTPS connections which could then lead to errors (as is often the case with self-signed certificates). In case of an error one should try first to temporarily disable certificate verification of the problematic urllib3 consumer to see if that approach will remedy the issue. ===> py37-pymatgen-2019.10.16 depends on package: py37-requests>0 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-ruamel.yaml>=0.15.6 - not found ===> Installing existing package /packages/All/py37-ruamel.yaml-0.15.87.txz Installing py37-ruamel.yaml-0.15.87... Extracting py37-ruamel.yaml-0.15.87: .......... done ===> py37-pymatgen-2019.10.16 depends on package: py37-ruamel.yaml>=0.15.6 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-scipy>=1.0.1 - found ===> py37-pymatgen-2019.10.16 depends on package: py37-six>0 - found ===> py37-pymatgen-2019.10.16 depends on package: py37-spglib>=1.9.9.44 - not found ===> Installing existing package /packages/All/py37-spglib-1.14.1.txz Installing py37-spglib-1.14.1... Extracting py37-spglib-1.14.1: .......... done ===> py37-pymatgen-2019.10.16 depends on package: py37-spglib>=1.9.9.44 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-sympy>0 - not found ===> Installing existing package /packages/All/py37-sympy-1.5.txz Installing py37-sympy-1.5... `-- Installing py37-mpmath-1.1.0... `-- Extracting py37-mpmath-1.1.0: .......... done Extracting py37-sympy-1.5: .......... done ===> py37-pymatgen-2019.10.16 depends on package: py37-sympy>0 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-tabulate>0 - not found ===> Installing existing package /packages/All/py37-tabulate-0.8.6.txz Installing py37-tabulate-0.8.6... Extracting py37-tabulate-0.8.6: .......... done ===> py37-pymatgen-2019.10.16 depends on package: py37-tabulate>0 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-netCDF4>0 - not found ===> Installing existing package /packages/All/py37-netCDF4-1.3.1_7.txz Installing py37-netCDF4-1.3.1_7... `-- Installing hdf5-1.10.6... | `-- Installing hdf-szip-2.1.1... | `-- Extracting hdf-szip-2.1.1: ....... done `-- Extracting hdf5-1.10.6: .......... done `-- Installing netcdf-4.7.3... | `-- Installing curl-7.68.0... | | `-- Installing ca_root_nss-3.50... | | `-- Extracting ca_root_nss-3.50: ..... done | | `-- Installing libnghttp2-1.40.0... | | `-- Extracting libnghttp2-1.40.0: ....... done | `-- Extracting curl-7.68.0: .......... done | `-- Installing pkgconf-1.6.3,1... | `-- Extracting pkgconf-1.6.3,1: .......... done `-- Extracting netcdf-4.7.3: .......... done `-- Installing py37-cython-0.29.13_1... `-- Extracting py37-cython-0.29.13_1: .......... done Extracting py37-netCDF4-1.3.1_7: .......... done ===== Message from ca_root_nss-3.50: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem ===> py37-pymatgen-2019.10.16 depends on package: py37-netCDF4>0 - found ===> Returning to build of py37-pymatgen-2019.10.16 ===> py37-pymatgen-2019.10.16 depends on package: py37-setuptools>0 - found ===> py37-pymatgen-2019.10.16 depends on file: /usr/local/bin/python3.7 - found -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for py37-pymatgen-2019.10.16 ===> Generating temporary packing list running install running build running build_py running build_ext running install_lib creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7 creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/ext copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/ext/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/ext copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/ext/matproj.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/ext copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/ext/crystalsai.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/ext copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/ext/cod.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/ext copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/ext/jhu.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/ext creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/feff_input_generation.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/pmg_analyze.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/pmg_config.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/pmg_query.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/pmg_potcar.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/get_environment.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/gaussian_analyzer.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/pmg.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/pmg_structure.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/feff_plot_cross_section.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/pmg_plot.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/cli/feff_plot_dos.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/dao.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/settings.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/site_symmetries.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/bandstructure.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/maggroups.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/structure.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/groups.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/analyzer.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/symm_data_magnetic.sqlite -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/symm_data.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/symm_ops.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/symm_data.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/symmetry/symm_ops.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries/computed_entries.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries/entry_tools.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries/compatibility.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries/exp_entries.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries/MITCompatibility.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries/MPCompatibility.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/entries/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/optimization copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/optimization copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization/linear_assignment_numpy.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/optimization copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization/linear_assignment.so -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/optimization copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/optimization/neighbors.so -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/optimization copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line/enumlib_caller.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line/mcsqs_caller.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line/aconvasp_caller.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line/gulp_caller.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line/vampire_caller.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line/bader_caller.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line/critic2_caller.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/command_line/OxideTersoffPotentials -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/zeopp.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/ase.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/xr.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lobster.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/cssr.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lmto.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/xcrysden.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/prismatic.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/fiesta.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/babel.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/pwscf.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/aiida.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/nwchem.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/cif.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/atat.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/xyz.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/gaussian.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/shengbte.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/phonopy.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/adf.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps/data.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps/utils.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps/outputs.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps/inputs.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps/templates copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/lammps/templates/md.txt -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps/templates creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/qchem copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/qchem/inputs.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/qchem copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/qchem/utils.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/qchem copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/qchem/outputs.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/qchem copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/qchem/sets.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/qchem copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/qchem/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/qchem creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit/abiobjects.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit/inputs.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit/helpers.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit/abitimer.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit/variable.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit/pseudos.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit/abiinspect.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/abinit/netcdf.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp/sets.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp/inputs.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp/outputs.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp/MVLGWSet.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp/MVLRelax52Set.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp/vdW_parameters.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp/MITRelaxSet.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp/MPRelaxSet.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp/incar_parameters.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp/MPHSERelaxSet.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/vasp/VASPIncarBase.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff/sets.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff/inputs.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff/outputs.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff/MPXANESSet.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff/MPEXELFSSet.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff/MPELNESSet.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/feff/MPEXAFSSet.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/exciting copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/exciting/inputs.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/exciting copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/exciting/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/exciting copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/io/BASIS_PBE_54.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/coord_cython.so -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/typing.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/convergence.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/num.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/coord.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/sequence.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/io_utils.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/provenance.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/testing.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/string.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/plotting.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/serialization.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/VO2.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/TiO2.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/TlBiSe2.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/K2O2.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/Si.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/He_BCC.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/NaFePO4.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/SrTiO3.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/Li3V2(PO4)3.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/Graphite.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/Sn.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/CsCl.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/Li2O.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/BaNiO3.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/Li2O2.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/Pb2TiZrO6.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/Li10GeP2S12.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/LiFePO4.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/util/structures/SiO2.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/structures creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/alchemy copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/alchemy/transmuters.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/alchemy copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/alchemy/filters.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/alchemy copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/alchemy/materials.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/alchemy copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/alchemy/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/alchemy creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/vis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/vis/plotters.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/vis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/vis/structure_vtk.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/vis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/vis/structure_chemview.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/vis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/vis/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/vis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/vis/ElementColorSchemes.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/vis creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/piezo.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/graphs.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/nmr.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/wulff.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/molecule_structure_comparator.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/molecule_matcher.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_matcher.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/eos.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/pourbaix_diagram.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/reaction_calculator.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/substrate_analyzer.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/phase_diagram.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffusion_analyzer.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/local_env.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/ewald.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/bond_dissociation.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/thermochemistry.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/functional_groups.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/surface_analysis.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/quasiharmonic.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/piezo_sensitivity.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/energy_models.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/dimensionality.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/fragmenter.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_analyzer.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/excitation.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/transition_state.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/find_dimension.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/interface.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/path_finder.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/aflow_prototypes.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/interface_reactions.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/bond_valence.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/adsorption.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/diffraction copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/diffraction copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction/neutron.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/diffraction copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction/xrd.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/diffraction copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction/core.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/diffraction copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction/neutron_scattering_length.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/diffraction copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/diffraction/atomic_scattering_params.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/diffraction creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/gb copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/gb/grain.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/gb copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/gb/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/gb creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction/dopant_predictor.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction/substitutor.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction/volume_predictor.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction/substitution_probability.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction/DLS_bond_params.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction/data copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction/data/lambda.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction/data copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/structure_prediction/data/pair_correlation.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction/data creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/xas copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/xas/spectrum.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/xas copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/xas/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/xas creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/magnetism copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/magnetism/jahnteller.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/magnetism copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/magnetism/heisenberg.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/magnetism copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/magnetism/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/magnetism copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/magnetism/analyzer.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/magnetism copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/magnetism/default_magmoms.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/magnetism creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects/utils.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects/generators.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects/corrections.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects/defect_compatibility.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects/thermodynamics.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects/dilute_solution_model.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/defects/core.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/voronoi.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#20.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_3#9.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_1#9.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DDPN#8.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TL#3.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#5.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/CO#11.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_2#9.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ST#7.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PB#7.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_2#9.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SMA#9.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PCPA#11.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#13.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SA#8.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#4.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/AC#12.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TI#9.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBT#8.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TY#3.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SC#12.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PA#10.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ET#7.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PBP#12.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT#12.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DI#11.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HP#12.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBSA#10.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HD#9.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_2#10.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#8.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_3#9.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBSA#10.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_1#10.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_1#8.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/L#2.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#10.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HA#12.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#5.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/FO#7.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#4.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#1.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#10.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TC#9.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#12.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#12.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/MI#10.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#11.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#8.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#9.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/I#12.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TS#3.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6_explicit.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#5.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#4.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/allcg.txt -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_1#9.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HB#8.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#6.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBT#8.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_2#8.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/A#2.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#6.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#10.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_3#8.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#11.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SY#4.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/strategy_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/strategy_files/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/strategy_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/strategy_files/ImprovedConfidenceCutoffDefaultParameters.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/strategy_files copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/chemenv_strategies.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/coordination_environments/coordination_geometry_finder.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils/chemenv_errors.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils/chemenv_config.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils/math_utils.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils/func_utils.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils/scripts_utils.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils/defs_utils.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/chemenv/utils/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/cost copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/cost/cost.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/cost copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/cost/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/cost copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/cost/costdb_elements.csv -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/cost creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/elasticity copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/elasticity/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/elasticity copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/elasticity/strain.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/elasticity copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/elasticity/elastic.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/elasticity copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/elasticity/stress.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/elasticity creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/ferroelectricity copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/ferroelectricity/polarization.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/ferroelectricity copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/ferroelectricity/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/ferroelectricity creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/hhi copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/hhi/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/hhi copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/hhi/hhi.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/hhi copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/hhi/hhi_data.csv -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/hhi copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/bvparam_1991.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/op_params.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/bonds_jmol_ob.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/cn_opt_params.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/ionic_radii.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/icsd_bv.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/aflow_prototypes.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/analysis/vesta_cutoffs.yaml -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure/core.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure/boltztrap2.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure/bandstructure.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure/plotter.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure/dos.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure/boltztrap.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/electronic_structure/cohp.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/phonon copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/phonon/dos.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/phonon copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/phonon/ir_spectra.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/phonon copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/phonon/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/phonon copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/phonon/plotter.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/phonon copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/phonon/bandstructure.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/phonon creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations/advanced_transformations.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations/transformation_abc.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations/defect_transformations.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations/standard_transformations.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/transformations/site_transformations.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery/analyzer.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery/plotter.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery/battery_abc.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery/conversion_battery.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/battery/insertion_battery.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/borg copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/borg/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/borg copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/borg/queen.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/borg copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/apps/borg/hive.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/borg creating /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/periodic_table.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/lattice.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/spectrum.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/libxcfunc.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/bonds.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/molecular_orbitals.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/composition.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/__init__.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/structure.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/units.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/operations.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/ion.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/xcfunc.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/sites.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/surface.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/trajectory.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/libxc_docs.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/quad_data.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/periodic_table.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/func_groups.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/bond_lengths.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/reconstructions_archive.json -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core copying build/lib.dragonfly-5.7-SYNTH-x86_64-3.7/pymatgen/core/tensors.py -> /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/ext/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/ext/matproj.py to matproj.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/ext/crystalsai.py to crystalsai.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/ext/cod.py to cod.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/ext/jhu.py to jhu.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/feff_input_generation.py to feff_input_generation.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/pmg_analyze.py to pmg_analyze.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/pmg_config.py to pmg_config.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/pmg_query.py to pmg_query.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/pmg_potcar.py to pmg_potcar.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/get_environment.py to get_environment.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/gaussian_analyzer.py to gaussian_analyzer.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/pmg.py to pmg.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/pmg_structure.py to pmg_structure.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/feff_plot_cross_section.py to feff_plot_cross_section.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/pmg_plot.py to pmg_plot.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/cli/feff_plot_dos.py to feff_plot_dos.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/dao.py to dao.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry/settings.py to settings.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry/site_symmetries.py to site_symmetries.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry/bandstructure.py to bandstructure.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry/maggroups.py to maggroups.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry/structure.py to structure.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry/groups.py to groups.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/symmetry/analyzer.py to analyzer.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries/computed_entries.py to computed_entries.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries/entry_tools.py to entry_tools.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries/compatibility.py to compatibility.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries/exp_entries.py to exp_entries.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/entries/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/optimization/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/optimization/linear_assignment_numpy.py to linear_assignment_numpy.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line/enumlib_caller.py to enumlib_caller.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line/mcsqs_caller.py to mcsqs_caller.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line/aconvasp_caller.py to aconvasp_caller.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line/gulp_caller.py to gulp_caller.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line/vampire_caller.py to vampire_caller.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line/bader_caller.py to bader_caller.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/command_line/critic2_caller.py to critic2_caller.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/zeopp.py to zeopp.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/ase.py to ase.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/xr.py to xr.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lobster.py to lobster.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/cssr.py to cssr.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lmto.py to lmto.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/xcrysden.py to xcrysden.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/prismatic.py to prismatic.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/fiesta.py to fiesta.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/babel.py to babel.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/pwscf.py to pwscf.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/aiida.py to aiida.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/nwchem.py to nwchem.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/cif.py to cif.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/atat.py to atat.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/xyz.py to xyz.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/gaussian.py to gaussian.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/shengbte.py to shengbte.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/phonopy.py to phonopy.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/adf.py to adf.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps/data.py to data.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps/utils.py to utils.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps/outputs.py to outputs.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/lammps/inputs.py to inputs.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/qchem/inputs.py to inputs.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/qchem/utils.py to utils.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/qchem/outputs.py to outputs.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/qchem/sets.py to sets.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/qchem/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit/abiobjects.py to abiobjects.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit/inputs.py to inputs.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit/helpers.py to helpers.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit/abitimer.py to abitimer.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit/variable.py to variable.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit/pseudos.py to pseudos.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit/abiinspect.py to abiinspect.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/abinit/netcdf.py to netcdf.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp/sets.py to sets.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp/inputs.py to inputs.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/vasp/outputs.py to outputs.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff/sets.py to sets.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff/inputs.py to inputs.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/feff/outputs.py to outputs.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/exciting/inputs.py to inputs.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/io/exciting/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/typing.py to typing.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/convergence.py to convergence.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/num.py to num.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/coord.py to coord.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/sequence.py to sequence.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/io_utils.py to io_utils.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/provenance.py to provenance.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/testing.py to testing.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/string.py to string.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/plotting.py to plotting.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/util/serialization.py to serialization.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/alchemy/transmuters.py to transmuters.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/alchemy/filters.py to filters.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/alchemy/materials.py to materials.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/alchemy/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/vis/plotters.py to plotters.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/vis/structure_vtk.py to structure_vtk.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/vis/structure_chemview.py to structure_chemview.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/vis/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/piezo.py to piezo.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/graphs.py to graphs.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/nmr.py to nmr.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/wulff.py to wulff.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/molecule_structure_comparator.py to molecule_structure_comparator.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/molecule_matcher.py to molecule_matcher.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_matcher.py to structure_matcher.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/eos.py to eos.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/pourbaix_diagram.py to pourbaix_diagram.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/reaction_calculator.py to reaction_calculator.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/substrate_analyzer.py to substrate_analyzer.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/phase_diagram.py to phase_diagram.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/diffusion_analyzer.py to diffusion_analyzer.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/local_env.py to local_env.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/ewald.py to ewald.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/bond_dissociation.py to bond_dissociation.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/thermochemistry.py to thermochemistry.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/functional_groups.py to functional_groups.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/surface_analysis.py to surface_analysis.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/quasiharmonic.py to quasiharmonic.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/piezo_sensitivity.py to piezo_sensitivity.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/energy_models.py to energy_models.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/dimensionality.py to dimensionality.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/fragmenter.py to fragmenter.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_analyzer.py to structure_analyzer.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/excitation.py to excitation.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/transition_state.py to transition_state.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/find_dimension.py to find_dimension.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/interface.py to interface.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/path_finder.py to path_finder.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/aflow_prototypes.py to aflow_prototypes.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/interface_reactions.py to interface_reactions.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/bond_valence.py to bond_valence.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/adsorption.py to adsorption.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/diffraction/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/diffraction/neutron.py to neutron.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/diffraction/xrd.py to xrd.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/diffraction/core.py to core.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/gb/grain.py to grain.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/gb/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction/dopant_predictor.py to dopant_predictor.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction/substitutor.py to substitutor.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction/volume_predictor.py to volume_predictor.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/structure_prediction/substitution_probability.py to substitution_probability.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/xas/spectrum.py to spectrum.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/xas/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/magnetism/jahnteller.py to jahnteller.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/magnetism/heisenberg.py to heisenberg.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/magnetism/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/magnetism/analyzer.py to analyzer.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects/utils.py to utils.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects/generators.py to generators.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects/corrections.py to corrections.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects/defect_compatibility.py to defect_compatibility.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects/thermodynamics.py to thermodynamics.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects/dilute_solution_model.py to dilute_solution_model.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/defects/core.py to core.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/voronoi.py to voronoi.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py to coordination_geometries.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py to structure_environments.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/strategy_files/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/chemenv_strategies.py to chemenv_strategies.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/coordination_environments/coordination_geometry_finder.py to coordination_geometry_finder.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils/chemenv_errors.py to chemenv_errors.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils/chemenv_config.py to chemenv_config.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils/math_utils.py to math_utils.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py to coordination_geometry_utils.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils/func_utils.py to func_utils.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils/scripts_utils.py to scripts_utils.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils/defs_utils.py to defs_utils.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/chemenv/utils/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/cost/cost.py to cost.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/cost/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/elasticity/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/elasticity/strain.py to strain.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/elasticity/elastic.py to elastic.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/elasticity/stress.py to stress.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/ferroelectricity/polarization.py to polarization.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/ferroelectricity/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/hhi/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/analysis/hhi/hhi.py to hhi.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure/core.py to core.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure/boltztrap2.py to boltztrap2.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure/bandstructure.py to bandstructure.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure/plotter.py to plotter.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure/dos.py to dos.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure/boltztrap.py to boltztrap.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/electronic_structure/cohp.py to cohp.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/phonon/dos.py to dos.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/phonon/ir_spectra.py to ir_spectra.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/phonon/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/phonon/plotter.py to plotter.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/phonon/bandstructure.py to bandstructure.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations/advanced_transformations.py to advanced_transformations.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations/transformation_abc.py to transformation_abc.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations/defect_transformations.py to defect_transformations.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations/standard_transformations.py to standard_transformations.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/transformations/site_transformations.py to site_transformations.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery/analyzer.py to analyzer.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery/plotter.py to plotter.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery/battery_abc.py to battery_abc.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery/conversion_battery.py to conversion_battery.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/battery/insertion_battery.py to insertion_battery.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/borg/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/borg/queen.py to queen.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/apps/borg/hive.py to hive.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/periodic_table.py to periodic_table.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/lattice.py to lattice.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/spectrum.py to spectrum.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/libxcfunc.py to libxcfunc.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/bonds.py to bonds.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/molecular_orbitals.py to molecular_orbitals.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/composition.py to composition.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/__init__.py to __init__.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/structure.py to structure.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/units.py to units.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/operations.py to operations.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/ion.py to ion.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/xcfunc.py to xcfunc.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/sites.py to sites.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/surface.py to surface.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/trajectory.py to trajectory.cpython-37.pyc byte-compiling /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen/core/tensors.py to tensors.cpython-37.pyc writing byte-compilation script '/tmp/tmp93tst0vo.py' /usr/local/bin/python3.7 /tmp/tmp93tst0vo.py removing /tmp/tmp93tst0vo.py running install_egg_info running egg_info writing pymatgen.egg-info/PKG-INFO writing dependency_links to pymatgen.egg-info/dependency_links.txt writing entry points to pymatgen.egg-info/entry_points.txt writing requirements to pymatgen.egg-info/requires.txt writing top-level names to pymatgen.egg-info/top_level.txt reading manifest file 'pymatgen.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching 'tests/*.*' found under directory 'pymatgen' writing manifest file 'pymatgen.egg-info/SOURCES.txt' Copying pymatgen.egg-info to /construction/science/py-pymatgen/stage/usr/local/lib/python3.7/site-packages/pymatgen-2019.10.16-py3.7.egg-info running install_scripts Installing feff_input_generation script to /construction/science/py-pymatgen/stage/usr/local/bin Installing feff_plot_cross_section script to /construction/science/py-pymatgen/stage/usr/local/bin Installing feff_plot_dos script to /construction/science/py-pymatgen/stage/usr/local/bin Installing gaussian_analyzer script to /construction/science/py-pymatgen/stage/usr/local/bin Installing get_environment script to /construction/science/py-pymatgen/stage/usr/local/bin Installing pmg script to /construction/science/py-pymatgen/stage/usr/local/bin writing list of installed files to '/construction/science/py-pymatgen/.PLIST.pymodtmp' ===> Creating unique files: Move MAN files needing SUFFIX ===> Creating unique files: Move files needing SUFFIX Move: bin/feff_input_generation --> bin/feff_input_generation-3.7 Link: @bin/feff_input_generation --> bin/feff_input_generation-3.7 Move: bin/feff_plot_cross_section --> bin/feff_plot_cross_section-3.7 Link: @bin/feff_plot_cross_section --> bin/feff_plot_cross_section-3.7 Move: bin/feff_plot_dos --> bin/feff_plot_dos-3.7 Link: @bin/feff_plot_dos --> bin/feff_plot_dos-3.7 Move: bin/gaussian_analyzer --> bin/gaussian_analyzer-3.7 Link: @bin/gaussian_analyzer --> bin/gaussian_analyzer-3.7 Move: bin/get_environment --> bin/get_environment-3.7 Link: @bin/get_environment --> bin/get_environment-3.7 Move: bin/pmg --> bin/pmg-3.7 Link: @bin/pmg --> bin/pmg-3.7 ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Error: /usr/local/lib/python3.7/site-packages/pymatgen/optimization/linear_assignment.so is linked to /usr/local/lib/libintl.so.8 from devel/gettext-runtime but it is not declared as a dependency Warning: you need USES+=gettext-runtime Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for py37-pymatgen-2019.10.16 file sizes/checksums [892]: ......... done packing files [892]: ......... done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Saturday, 15 FEB 2020 at 10:33:23 UTC Duration: 00:03:18