=> Building science/jmol Started : Saturday, 15 FEB 2020 at 16:41:39 UTC Platform: 5.7-DEVELOPMENT DragonFly v5.7.0.1432.g9cd86-DEVELOPMENT #23: Thu Feb 13 14:43:04 PST 2020 root@sting.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.7-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.7-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- ===> The following configuration options are available for Jmol-14.30.2: DOCS=on: Build and/or install documentation ===> Use 'make config' to modify these settings -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/science/jmol XDG_CONFIG_HOME=/construction/science/jmol HOME=/construction/science/jmol TMPDIR="/tmp" PATH=/construction/science/jmol/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- JAVA_HOME=/usr/local/openjdk8 XDG_DATA_HOME=/construction/science/jmol XDG_CONFIG_HOME=/construction/science/jmol HOME=/construction/science/jmol TMPDIR="/tmp" PATH=/construction/science/jmol/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- -Dfreebsd.ports.destdir=/construction/science/jmol/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- PORTDOCS="" JAVASHAREDIR="share/java" JAVAJARDIR="share/java/classes" OSREL=5.7 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/Jmol" EXAMPLESDIR="share/examples/Jmol" DATADIR="share/Jmol" WWWDIR="www/Jmol" ETCDIR="etc/Jmol" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- JAVA=/usr/local/openjdk8/bin/java JAVASHAREDIR="/usr/local/share/java" JAVAJARDIR="/usr/local/share/java/classes" JAVALIBDIR="/usr/local/share/java/classes" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/Jmol DOCSDIR=/usr/local/share/doc/Jmol EXAMPLESDIR=/usr/local/share/examples/Jmol WWWDIR=/usr/local/www/Jmol ETCDIR=/usr/local/etc/Jmol -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=LiveSystem USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=15 DPORTS_BUILDER= yes DISABLE_LICENSES= yes DEFAULT_VERSIONS= ssl=openssl FORCE_PACKAGE= yes DEVELOPER= yes HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _PERL5_FROM_BIN=5.30.1 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=32 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500709 OSVERSION=9999999 OSREL=5.7 _OSRELEASE=5.7-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> Jmol-14.30.2 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.12.0_1.txz Installing pkg-1.12.0_1... Extracting pkg-1.12.0_1: .......... done ===> Jmol-14.30.2 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of Jmol-14.30.2 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- => Jmol-14.30.2-full.tar.gz doesn't seem to exist in /distfiles/. => Attempting to fetch https://downloads.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://downloads.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch https://cytranet.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://cytranet.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: Operation timed out => Attempting to fetch https://excellmedia.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://excellmedia.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch https://freefr.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://freefr.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch https://jaist.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://jaist.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch https://kent.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://kent.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch https://nchc.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://nchc.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch https://netcologne.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://netcologne.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch https://netix.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://netix.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch https://superb-dca2.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://superb-dca2.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch https://superb-sea2.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://superb-sea2.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: Connection refused => Attempting to fetch https://ufpr.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://ufpr.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch https://vorboss.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: https://vorboss.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch http://downloads.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://downloads.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch http://cytranet.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://cytranet.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: Operation timed out => Attempting to fetch http://excellmedia.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://excellmedia.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch http://freefr.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://freefr.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch http://jaist.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://jaist.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch http://kent.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://kent.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch http://nchc.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://nchc.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch http://netcologne.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://netcologne.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch http://netix.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://netix.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch http://superb-dca2.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://superb-dca2.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch http://superb-sea2.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://superb-sea2.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: Connection refused => Attempting to fetch http://ufpr.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://ufpr.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch http://vorboss.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz fetch: http://vorboss.dl.sourceforge.net/project/jmol/Jmol/Version%2014.30/Jmol%2014.30.2/Jmol-14.30.2-full.tar.gz: size mismatch: expected 133544337, actual 133544786 => Attempting to fetch http://distcache.FreeBSD.org/ports-distfiles/Jmol-14.30.2-full.tar.gz Jmol-14.30.2-full.tar.gz 127 MB 3387 kBps 38s ===> Fetching all distfiles required by Jmol-14.30.2 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> Fetching all distfiles required by Jmol-14.30.2 for building => SHA256 Checksum OK for Jmol-14.30.2-full.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> Fetching all distfiles required by Jmol-14.30.2 for building ===> Extracting for Jmol-14.30.2 => SHA256 Checksum OK for Jmol-14.30.2-full.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for Jmol-14.30.2 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> Jmol-14.30.2 depends on file: /usr/local/openjdk8/bin/java - not found ===> Installing existing package /packages/All/openjdk8-8.181.13_1.txz Installing openjdk8-8.181.13_1... `-- Installing alsa-lib-1.1.2_2... `-- Extracting alsa-lib-1.1.2_2: .......... done `-- Installing dejavu-2.37_1... | `-- Installing fontconfig-2.12.6,1... | | `-- Installing expat-2.2.8... | | `-- Extracting expat-2.2.8: .......... done | | `-- Installing freetype2-2.10.1... | | `-- Extracting freetype2-2.10.1: .......... done | `-- Extracting fontconfig-2.12.6,1: .......... done Running fc-cache to build fontconfig cache... /usr/local/share/fonts: skipping, no such directory /usr/local/lib/X11/fonts: skipping, no such directory /var/db/fontconfig: cleaning cache directory fc-cache: succeeded | `-- Installing mkfontscale-1.2.1... | | `-- Installing libfontenc-1.1.4... | | `-- Extracting libfontenc-1.1.4: ...... done | `-- Extracting mkfontscale-1.2.1: .... done `-- Extracting dejavu-2.37_1: .......... done `-- Installing giflib-5.2.1... `-- Extracting giflib-5.2.1: .......... done `-- Installing java-zoneinfo-2019.b... `-- Extracting java-zoneinfo-2019.b: .......... done `-- Installing javavmwrapper-2.7.4... `-- Extracting javavmwrapper-2.7.4: .......... done `-- Installing libX11-1.6.9,1... | `-- Installing libXau-1.0.9... | `-- Extracting libXau-1.0.9: .......... done | `-- Installing libXdmcp-1.1.3... | | `-- Installing xorgproto-2019.2... | | `-- Extracting xorgproto-2019.2: .......... done | `-- Extracting libXdmcp-1.1.3: ...... done | `-- Installing libxcb-1.13.1... | | `-- Installing libpthread-stubs-0.4... | | `-- Extracting libpthread-stubs-0.4: .... done | | `-- Installing libxml2-2.9.10... | | `-- Extracting libxml2-2.9.10: .......... done | `-- Extracting libxcb-1.13.1: .......... done `-- Extracting libX11-1.6.9,1: .......... done `-- Installing libXext-1.3.4,1... `-- Extracting libXext-1.3.4,1: .......... done `-- Installing libXi-1.7.10,1... | `-- Installing libXfixes-5.0.3_2... | `-- Extracting libXfixes-5.0.3_2: ....... done `-- Extracting libXi-1.7.10,1: .......... done `-- Installing libXrender-0.9.10_2... `-- Extracting libXrender-0.9.10_2: ....... done `-- Installing libXt-1.2.0,1... | `-- Installing libICE-1.0.10,1... | `-- Extracting libICE-1.0.10,1: .......... done | `-- Installing libSM-1.2.3,1... | `-- Extracting libSM-1.2.3,1: ........ done `-- Extracting libXt-1.2.0,1: .......... done `-- Installing libXtst-1.2.3_2... `-- Extracting libXtst-1.2.3_2: .......... done Extracting openjdk8-8.181.13_1: .......... done ===== Message from freetype2-2.10.1: -- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. If LONG_PCF_NAMES port's option was enabled, the PCF family names may include the foundry and information whether they contain wide characters. For example, "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at run time with using pcf:no-long-family-names property, if needed. Example: FREETYPE_PROPERTIES=pcf:no-long-family-names=1 How to recreate fontconfig cache with using such environment variable, if needed: # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/site/index.html, if documentation was installed). ===== Message from dejavu-2.37_1: -- Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. ===== Message from openjdk8-8.181.13_1: -- ====================================================================== This OpenJDK implementation requires procfs(5) mounted on /proc. If you have not done it yet, please do the following: mount -t procfs proc /proc To make it permanent, you need the following line in /etc/fstab: proc /proc procfs rw 0 0 ====================================================================== ===> Jmol-14.30.2 depends on file: /usr/local/openjdk8/bin/java - found ===> Returning to build of Jmol-14.30.2 ===> Jmol-14.30.2 depends on file: /usr/local/bin/ant - not found ===> Installing existing package /packages/All/apache-ant-1.10.6.txz Installing apache-ant-1.10.6... Extracting apache-ant-1.10.6: .......... done ===> Jmol-14.30.2 depends on file: /usr/local/bin/ant - found ===> Returning to build of Jmol-14.30.2 -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for Jmol-14.30.2 -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for Jmol-14.30.2 Buildfile: /construction/science/jmol/jmol-14.30.2/build.xml [copy] Copying 1 file to /construction/science/jmol/jmol-14.30.2 [echo] version=14.30.2 [echo] build/dist [echo] version=14.30.2 [echo] versionMajorMinor: 14.30 [echo] versionMajorMinorPatch: 14.30.2 [echo] betaFlag: 14.30.2 [echo] path.release: Jmol/Version 14.30 [echo] build/dist [echo] version=14.30.2 [echo] versionMajorMinor: 14.30 [echo] versionMajorMinorPatch: 14.30.2 [echo] betaFlag: 14.30.2 [echo] path.release: Jmol/Version 14.30 init: classes: [mkdir] Created dir: /construction/science/jmol/jmol-14.30.2/build/classes [javac] Compiling 1106 source files to /construction/science/jmol/jmol-14.30.2/build/classes [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.6 [javac] /construction/science/jmol/jmol-14.30.2/src/javajs/util/DebugJS.java:15: warning: '_' used as an identifier [javac] public static void _(String msg) { [javac] ^ [javac] (use of '_' as an identifier might not be supported in releases after Java SE 8) [javac] /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/JmolAudio.java:42: warning: AudioData is internal proprietary API and may be removed in a future release [javac] import sun.audio.AudioData; [javac] ^ [javac] /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/JmolAudio.java:43: warning: AudioDataStream is internal proprietary API and may be removed in a future release [javac] import sun.audio.AudioDataStream; [javac] ^ [javac] /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/JmolAudio.java:48: warning: AudioData is internal proprietary API and may be removed in a future release [javac] javax.sound.sampled.LineListener.class, sun.audio.AudioData.class, [javac] ^ [javac] /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/JmolAudio.java:49: warning: AudioDataStream is internal proprietary API and may be removed in a future release [javac] sun.audio.AudioDataStream.class }) [javac] ^ [javac] /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/JmolAudio.java:117: warning: AudioDataStream is internal proprietary API and may be removed in a future release [javac] AudioInputStream ais = AudioSystem.getAudioInputStream(new AudioDataStream( [javac] ^ [javac] /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/JmolAudio.java:118: warning: AudioData is internal proprietary API and may be removed in a future release [javac] new AudioData((byte[]) data))); [javac] ^ [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 8 warnings [copy] Copying 263 files to /construction/science/jmol/jmol-14.30.2/build/classes setup: check.docbook-xml: [mkdir] Created dir: /construction/science/jmol/jmol-14.30.2/build/docbook-xml [unzip] Expanding: /construction/science/jmol/jmol-14.30.2/doc/docbook-xml-4.4.zip into /construction/science/jmol/jmol-14.30.2/build/docbook-xml [touch] Creating /construction/science/jmol/jmol-14.30.2/build/docbook-xml.timestamp check.docbook-xsl: [mkdir] Created dir: /construction/science/jmol/jmol-14.30.2/build/docbook-xsl-1.76.1 [untar] Expanding: /construction/science/jmol/jmol-14.30.2/doc/docbook-xsl-1.76.1.tar.gz into /construction/science/jmol/jmol-14.30.2/build [touch] Creating /construction/science/jmol/jmol-14.30.2/build/docbook-xsl-1.76.1.timestamp check.xsl: initdoc: jmolGuide: [echo] Generating user's guide [mkdir] Created dir: /construction/science/jmol/jmol-14.30.2/build/doc/JmolUserGuide [java] Writing ch01.html for chapter(intro) [java] Writing ch02s02.html for section(OptionScript) [java] Writing ch02s03.html for section(OptionGeometry) [java] Writing ch02s04.html for section(OptionLanguage) [java] Writing ch02s05.html for section(OptionSpeed) [java] Writing ch02s06.html for section(OptionPluginDir) [java] Writing ch02s07.html for section(OptionXmx) [java] Writing ch02.html for chapter(commandlineoptions) [java] Writing ch03s02.html for section(EditMenu) [java] Writing ch03s03.html for section(DisplayMenu) [java] Writing ch03s04.html for section(ViewMenu) [java] Writing ch03s05.html for section(HelpMenu) [java] Writing ch03.html for chapter(menudesc) [java] Element img in namespace '' encountered in para, but no template matches. [java] Element img in namespace '' encountered in para, but no template matches. [java] Element img in namespace '' encountered in para, but no template matches. [java] Writing ch04.html for chapter(rasmol) [java] Writing index.html for book [echo] Generating user's guide (fr) [mkdir] Created dir: /construction/science/jmol/jmol-14.30.2/build/doc/JmolUserGuide_fr [java] Writing ch01.html for chapter(intro) [java] Writing ch02s02.html for section(OptionLanguage) [java] Writing ch02s03.html for section(OptionSpeed) [java] Writing ch02s04.html for section(OptionXmx) [java] Writing ch02.html for chapter(commandlineoptions) [java] Writing ch03s02.html for section(EditMenu) [java] Writing ch03s03.html for section(DisplayMenu) [java] Writing ch03s04.html for section(ViewMenu) [java] Writing ch03s05.html for section(HelpMenu) [java] Writing ch03.html for chapter(menudesc) [java] Element img in namespace '' encountered in para, but no template matches. [java] Element img in namespace '' encountered in para, but no template matches. [java] Element img in namespace '' encountered in para, but no template matches. [java] Writing ch04.html for chapter(rasmol) [java] Writing index.html for book jmolHistory: [echo] Generating history of changes [mkdir] Created dir: /construction/science/jmol/jmol-14.30.2/build/doc/JmolHistory [echo] Generating history of changes (fr) [echo] Generating history of changes (nl) [echo] Generating history of changes (ro) jmolDevelopersGuide: [echo] Generating developer's guide [echo] Generating developer's guide (fr) [echo] Generating developer's guide (de) check.libjars: libjars: [mkdir] Created dir: /construction/science/jmol/jmol-14.30.2/build/appjars [unjar] Expanding: /construction/science/jmol/jmol-14.30.2/jars/naga-3_0.jar into /construction/science/jmol/jmol-14.30.2/build/appjars [unjar] Expanding: /construction/science/jmol/jmol-14.30.2/jars/commons-cli-1.2.jar into /construction/science/jmol/jmol-14.30.2/build/appjars [delete] Deleting directory /construction/science/jmol/jmol-14.30.2/build/appjars/META-INF [touch] Creating /construction/science/jmol/jmol-14.30.2/build/libjars.timestamp main-i18n: init-i18n: check-executables: [exec] Execute failed: java.io.IOException: Cannot run program "xgettext" (in directory "/construction/science/jmol/jmol-14.30.2/src"): error=2, No such file or directory [exec] Execute failed: java.io.IOException: Cannot run program "msgmerge" (in directory "/construction/science/jmol/jmol-14.30.2/src"): error=2, No such file or directory [exec] Execute failed: java.io.IOException: Cannot run program "msgfmt" (in directory "/construction/science/jmol/jmol-14.30.2/src"): error=2, No such file or directory [echo] [echo] The gettext tools are not available. [echo] They are needed if you want to build a version of Jmol with translations in other languages. [echo] Otherwise, you dont need them. [echo] ---------------------------------------------- [echo] Homepage: http://www.gnu.org/software/gettext/ [echo] Win32: http://gnuwin32.sourceforge.net/packages/gettext.htm [echo] [the full gnu/bin set of files, including dll files needs to be [echo] put somewhere on your Windows PATH. Bob has these in C:\gnu\bin] [echo] check-uptodate-application-pot: create-application-pot: check-uptodate-applet-pot: create-applet-pot: update-pot: update-application-po: update-applet-po: update-po: update-application-catalog: update-applet-catalog: update-catalog: tar-i18n: [delete] Deleting: /construction/science/jmol/jmol-14.30.2/src/org/jmol/translation/translations.tgz [tar] Building tar: /construction/science/jmol/jmol-14.30.2/src/org/jmol/translation/translations.tgz main-i18n: jar: [copy] Copying 15 files to /construction/science/jmol/jmol-14.30.2/build/classes/org/openscience/jmol/Data/guide [copy] Copying 12 files to /construction/science/jmol/jmol-14.30.2/build/classes/org/openscience/jmol/Data/guide_fr [copy] Copying 4 files to /construction/science/jmol/jmol-14.30.2/build/classes/org/openscience/jmol/Data [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/Jmol.jar [echo] Creating Jmol.jar -- if this fails, check to see that build/Jmol.jar is not open. [echo] version=14.30.2 [echo] build/dist [echo] version=14.30.2 [echo] versionMajorMinor: 14.30 [echo] versionMajorMinorPatch: 14.30.2 [echo] betaFlag: 14.30.2 [echo] path.release: Jmol/Version 14.30 [echo] build/dist [echo] version=14.30.2 [echo] versionMajorMinor: 14.30 [echo] versionMajorMinorPatch: 14.30.2 [echo] betaFlag: 14.30.2 [echo] path.release: Jmol/Version 14.30 sign-jar-file: [echo] using self-signed certificate [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/Jmol.jar to /construction/science/jmol/jmol-14.30.2/build/Jmol.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolData.jar [echo] version=14.30.2 [echo] build/dist [echo] version=14.30.2 [echo] versionMajorMinor: 14.30 [echo] versionMajorMinorPatch: 14.30.2 [echo] betaFlag: 14.30.2 [echo] path.release: Jmol/Version 14.30 [echo] build/dist [echo] version=14.30.2 [echo] versionMajorMinor: 14.30 [echo] versionMajorMinorPatch: 14.30.2 [echo] betaFlag: 14.30.2 [echo] path.release: Jmol/Version 14.30 sign-jar-file: [echo] using self-signed certificate [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolData.jar to /construction/science/jmol/jmol-14.30.2/build/JmolData.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [copy] Copying 3 files to /construction/science/jmol/jmol-14.30.2/build [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/Jvxl.jar [echo] version=14.30.2 [echo] build/dist [echo] version=14.30.2 [echo] versionMajorMinor: 14.30 [echo] versionMajorMinorPatch: 14.30.2 [echo] betaFlag: 14.30.2 [echo] path.release: Jmol/Version 14.30 [echo] build/dist [echo] version=14.30.2 [echo] versionMajorMinor: 14.30 [echo] versionMajorMinorPatch: 14.30.2 [echo] betaFlag: 14.30.2 [echo] path.release: Jmol/Version 14.30 sign-jar-file: [echo] using self-signed certificate [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/Jvxl.jar to /construction/science/jmol/jmol-14.30.2/build/Jvxl.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. applet-classes: [mkdir] Created dir: /construction/science/jmol/jmol-14.30.2/build/applet-classes [copy] Copying 6 files to /construction/science/jmol/jmol-14.30.2/build/applet-classes [javac] Compiling 775 source files to /construction/science/jmol/jmol-14.30.2/build/applet-classes [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.6 [javac] /construction/science/jmol/jmol-14.30.2/src/javajs/util/DebugJS.java:15: warning: '_' used as an identifier [javac] public static void _(String msg) { [javac] ^ [javac] (use of '_' as an identifier might not be supported in releases after Java SE 8) [javac] /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/JmolAudio.java:42: warning: AudioData is internal proprietary API and may be removed in a future release [javac] import sun.audio.AudioData; [javac] ^ [javac] /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/JmolAudio.java:43: warning: AudioDataStream is internal proprietary API and may be removed in a future release [javac] import sun.audio.AudioDataStream; [javac] ^ [javac] /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/JmolAudio.java:48: warning: AudioData is internal proprietary API and may be removed in a future release [javac] javax.sound.sampled.LineListener.class, sun.audio.AudioData.class, [javac] ^ [javac] /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/JmolAudio.java:49: warning: AudioDataStream is internal proprietary API and may be removed in a future release [javac] sun.audio.AudioDataStream.class }) [javac] ^ [javac] /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/JmolAudio.java:117: warning: AudioDataStream is internal proprietary API and may be removed in a future release [javac] AudioInputStream ais = AudioSystem.getAudioInputStream(new AudioDataStream( [javac] ^ [javac] /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/JmolAudio.java:118: warning: AudioData is internal proprietary API and may be removed in a future release [javac] new AudioData((byte[]) data))); [javac] ^ [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: /construction/science/jmol/jmol-14.30.2/src/org/jmol/util/BZone.java uses unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 8 warnings [copy] Copying 46 files to /construction/science/jmol/jmol-14.30.2/build/applet-classes [copy] Copying 1 file to /construction/science/jmol/jmol-14.30.2/build/applet-classes/org/jmol/viewer applet-jar: [echo] Creating JmolApplet.jar [unjar] Expanding: /construction/science/jmol/jmol-14.30.2/jars/netscape.jar into /construction/science/jmol/jmol-14.30.2/build/applet-classes [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet.jar [echo] Creating JmolApplet0*.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Image.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Minimize.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Navigate.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Console.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_JSV.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Popup.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersMolXyz.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersCif.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersPdb.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersQuantum.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersPyMOL.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersMore.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersSimple.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersXtal.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersXml.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ScriptExt.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ShapeBio.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ShapeSpecial.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ShapeSurface.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Smiles.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Symmetry.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0.jar [echo] creating JmolLib.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolLib.jar signed-applet: [echo] Creating JmolAppletSigned.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned.jar [echo] Creating JmolAppletsigned0*.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Console.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Image.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_JSV.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Minimize.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_MultiTouch.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Navigate.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Popup.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersMolXyz.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersCif.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersPdb.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersMore.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersQuantum.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersPyMOL.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersSimple.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersXtal.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersXml.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ScriptExt.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ShapeBio.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ShapeSpecial.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ShapeSurface.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Smiles.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Symmetry.jar [jar] Building jar: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0.jar [echo] signing JmolApplet*.jar [echo] version=14.30.2 [echo] build/dist [echo] version=14.30.2 [echo] versionMajorMinor: 14.30 [echo] versionMajorMinorPatch: 14.30.2 [echo] betaFlag: 14.30.2 [echo] path.release: Jmol/Version 14.30 [echo] build/dist [echo] version=14.30.2 [echo] versionMajorMinor: 14.30 [echo] versionMajorMinorPatch: 14.30.2 [echo] betaFlag: 14.30.2 [echo] path.release: Jmol/Version 14.30 sign-jar-file: [echo] using self-signed certificate [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Console.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Console.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Image.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Image.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_JSV.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_JSV.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Minimize.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Minimize.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Navigate.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Navigate.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Popup.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Popup.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersCif.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersCif.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersMolXyz.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersMolXyz.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersMore.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersMore.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersPdb.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersPdb.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersPyMOL.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersPyMOL.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersQuantum.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersQuantum.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersSimple.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersSimple.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersXml.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersXml.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersXtal.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ReadersXtal.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ScriptExt.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ScriptExt.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ShapeBio.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ShapeBio.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ShapeSpecial.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ShapeSpecial.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ShapeSurface.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_ShapeSurface.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Smiles.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Smiles.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Symmetry.jar to /construction/science/jmol/jmol-14.30.2/build/JmolApplet0_Symmetry.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Console.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Console.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Image.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Image.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_JSV.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_JSV.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Minimize.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Minimize.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_MultiTouch.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_MultiTouch.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Navigate.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Navigate.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Popup.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Popup.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersCif.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersCif.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersMolXyz.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersMolXyz.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersMore.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersMore.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersPdb.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersPdb.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersPyMOL.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersPyMOL.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersQuantum.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersQuantum.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersSimple.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersSimple.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersXml.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersXml.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersXtal.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ReadersXtal.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ScriptExt.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ScriptExt.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ShapeBio.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ShapeBio.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ShapeSpecial.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ShapeSpecial.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ShapeSurface.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_ShapeSurface.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Smiles.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Smiles.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. [signjar] Signing JAR: /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Symmetry.jar to /construction/science/jmol/jmol-14.30.2/build/JmolAppletSigned0_Symmetry.jar as selfSignedCertificate [signjar] jar signed. [signjar] [signjar] Warning: [signjar] No -tsa or -tsacert is provided and this jar is not timestamped. Without a timestamp, users may not be able to validate this jar after the signer certificate's expiration date (2032-07-18) or after any future revocation date. smiles-applet-jar: main: BUILD SUCCESSFUL Total time: 5 minutes 40 seconds -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> Jmol-14.30.2 depends on file: /usr/local/openjdk8/bin/java - found -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for Jmol-14.30.2 ===> Generating temporary packing list install -m 555 /construction/science/jmol/jmol /construction/science/jmol/stage/usr/local/bin install -m 555 /construction/science/jmol/jmoldata /construction/science/jmol/stage/usr/local/bin install -m 0644 /construction/science/jmol/jmol-14.30.2/build/Jmol.jar /construction/science/jmol/stage/usr/local/share/java/classes install -m 0644 /construction/science/jmol/jmol-14.30.2/build/JmolData.jar /construction/science/jmol/stage/usr/local/share/java/classes install -m 0644 /construction/science/jmol/jmol-14.30.2/build/JmolLib.jar /construction/science/jmol/stage/usr/local/share/java/classes cd /construction/science/jmol/jmol-14.30.2/doc && /bin/sh -c '(/usr/bin/find -Ed $1 $3 | /usr/bin/cpio -dumpl $2 >/dev/null 2>&1) && /usr/bin/find -Ed $1 $3 \( -type d -exec /bin/sh -c '\''cd '\''$2'\'' && chmod 755 "$@"'\'' . {} + -o -type f -exec /bin/sh -c '\''cd '\''$2'\'' && chmod 0644 "$@"'\'' . {} + \)' COPYTREE_SHARE . /construction/science/jmol/stage/usr/local/share/doc/Jmol ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for Jmol-14.30.2 file sizes/checksums [81]: . done packing files [81]: . done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Saturday, 15 FEB 2020 at 16:53:26 UTC Duration: 00:11:47