=> Building math/p5-NetCDF Started : Friday, 14 FEB 2020 at 17:13:38 UTC Platform: 5.7-DEVELOPMENT DragonFly v5.7.0.1432.g9cd86-DEVELOPMENT #23: Thu Feb 13 14:43:04 PST 2020 root@sting.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.7-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.7-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- CPP_NETCDF=-I/usr/local/include LD_NETCDF=-lnetcdf PERL_MANDIR=/construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/man PERL=/usr/local/bin/perl ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/construction/math/p5-NetCDF XDG_CONFIG_HOME=/construction/math/p5-NetCDF HOME=/construction/math/p5-NetCDF TMPDIR="/tmp" PATH=/construction/math/p5-NetCDF/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 CONFIG_SITE=/xports/Templates/config.site lt_cv_sys_max_cmd_len=262144 -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/construction/math/p5-NetCDF XDG_CONFIG_HOME=/construction/math/p5-NetCDF HOME=/construction/math/p5-NetCDF TMPDIR="/tmp" PATH=/construction/math/p5-NetCDF/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/math/p5-NetCDF/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- OSREL=5.7 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.30.1 PERL_VER=5.30 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.30 PROFILE="@comment " DOCSDIR="share/doc/NetCDF" EXAMPLESDIR="share/examples/NetCDF" DATADIR="share/NetCDF" WWWDIR="www/NetCDF" ETCDIR="etc/NetCDF" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/NetCDF DOCSDIR=/usr/local/share/doc/NetCDF EXAMPLESDIR=/usr/local/share/examples/NetCDF WWWDIR=/usr/local/www/NetCDF ETCDIR=/usr/local/etc/NetCDF -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=LiveSystem USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=15 DPORTS_BUILDER= yes DISABLE_LICENSES= yes DEFAULT_VERSIONS= ssl=openssl FORCE_PACKAGE= yes DEVELOPER= yes HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _PERL5_FROM_BIN=5.30.1 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=32 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500709 OSVERSION=9999999 OSREL=5.7 _OSRELEASE=5.7-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> p5-NetCDF-1.2.4_6 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.12.0_1.txz Installing pkg-1.12.0_1... Extracting pkg-1.12.0_1: .......... done ===> p5-NetCDF-1.2.4_6 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of p5-NetCDF-1.2.4_6 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- ===> Fetching all distfiles required by p5-NetCDF-1.2.4_6 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> Fetching all distfiles required by p5-NetCDF-1.2.4_6 for building => SHA256 Checksum OK for netcdf-perl-1.2.4.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> Fetching all distfiles required by p5-NetCDF-1.2.4_6 for building ===> Extracting for p5-NetCDF-1.2.4_6 => SHA256 Checksum OK for netcdf-perl-1.2.4.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for p5-NetCDF-1.2.4_6 ===> Applying ports patches for p5-NetCDF-1.2.4_6 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> p5-NetCDF-1.2.4_6 depends on executable: fakeroot - not found ===> Installing existing package /packages/All/fakeroot-1.23.txz Installing fakeroot-1.23... Extracting fakeroot-1.23: .......... done ===> p5-NetCDF-1.2.4_6 depends on executable: fakeroot - found ===> Returning to build of p5-NetCDF-1.2.4_6 ===> p5-NetCDF-1.2.4_6 depends on package: perl5>=5.30.r1<5.31 - not found ===> Installing existing package /packages/All/perl5-5.30.1.txz Installing perl5-5.30.1... Extracting perl5-5.30.1: .......... done ===== Message from perl5-5.30.1: -- The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. ===> p5-NetCDF-1.2.4_6 depends on package: perl5>=5.30.r1<5.31 - found ===> Returning to build of p5-NetCDF-1.2.4_6 -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- ===> p5-NetCDF-1.2.4_6 depends on shared library: libnetcdf.so - not found ===> Installing existing package /packages/All/netcdf-4.7.3.txz Installing netcdf-4.7.3... `-- Installing curl-7.68.0... | `-- Installing ca_root_nss-3.50... | `-- Extracting ca_root_nss-3.50: ..... done | `-- Installing libnghttp2-1.40.0... | `-- Extracting libnghttp2-1.40.0: ....... done | `-- Installing openssl-1.1.1d,1... | `-- Extracting openssl-1.1.1d,1: .......... done `-- Extracting curl-7.68.0: .......... done `-- Installing hdf-szip-2.1.1... `-- Extracting hdf-szip-2.1.1: ....... done `-- Installing hdf5-1.10.6... `-- Extracting hdf5-1.10.6: .......... done `-- Installing ncurses-6.1.20190525... `-- Extracting ncurses-6.1.20190525: .......... done `-- Installing pkgconf-1.6.3,1... `-- Extracting pkgconf-1.6.3,1: .......... done Extracting netcdf-4.7.3: .......... done ===== Message from ca_root_nss-3.50: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem ===> p5-NetCDF-1.2.4_6 depends on shared library: libnetcdf.so - found (/usr/local/lib/libnetcdf.so) ===> Returning to build of p5-NetCDF-1.2.4_6 -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for p5-NetCDF-1.2.4_6 configure: warning: x86_64-portbld-dragonfly5.7: invalid host type loading site script /xports/Templates/config.site creating cache ./config.cache checking for catman... no checking for makewhatis... makewhatis checking for manual-page index command... makewhatis $(MANDIR) checking for perl utility... /usr/local/bin/perl checking for perl manual page directory... /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/man checking for value of perl POLLUTE variable... 0 checking for neqn... cat configure: warning: ./configure: Can't find program `neqn'; setting to `cat' checking for tbl... cat configure: warning: ./configure: Can't find program `tbl'; setting to `cat' checking for C compiler... cc checking type of operating system... DragonFly checking for tar flags... -chof checking for netCDF header-file... -I/usr/local/include checking for netCDF library... -lnetcdf checking for package version... 1.2 updating cache ./config.cache creating ./config.status creating Makefile creating perl/Makefile.PL creating port/master.mk creating port/Makefile expanding `include's in file `Makefile' expanding `include's in file `perl/Makefile.PL' expanding `include's in file `port/master.mk' expanding `include's in file `port/Makefile' -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for p5-NetCDF-1.2.4_6 --- all --- --- decision --- --- perl/Makefile --- cd perl && /usr/local/bin/perl Makefile.PL POLLUTE=0 Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for NetCDF Writing MYMETA.yml and MYMETA.json --- perl/dynamic --- making `dynamic' in directory /construction/math/p5-NetCDF/netcdf-perl-1.2.4/src/perl --- blib/lib/.exists --- --- blib/arch/.exists --- --- blib/lib/auto/NetCDF/.exists --- --- blib/arch/auto/NetCDF/.exists --- --- blib/bin/.exists --- --- blib/script/.exists --- --- blib/man1/.exists --- --- blib/man3/.exists --- --- config --- --- dynamic --- --- NetCDF.c --- --- NetCDF.bs --- --- NetCDF.c --- "/usr/local/bin/perl" "/usr/local/lib/perl5/5.30/ExtUtils/xsubpp" -typemap '/usr/local/lib/perl5/5.30/ExtUtils/typemap' NetCDF.xs > NetCDF.xsc --- NetCDF.bs --- Running Mkbootstrap for NetCDF () chmod 644 "NetCDF.bs" --- blib/arch/auto/NetCDF/NetCDF.bs --- "/usr/local/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- NetCDF.bs blib/arch/auto/NetCDF/NetCDF.bs 644 --- blibdirs --- --- config --- --- NetCDF.c --- Please specify prototyping behavior for NetCDF.xs (see perlxs manual) mv NetCDF.xsc NetCDF.c --- NetCDF.o --- cc -c -I/usr/local/include -DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -DUSE_THREAD_SAFE_LOCALE -fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_FORTIFY_SOURCE=2 -pipe -O2 -fno-strict-aliasing -DVERSION=\"1.2.4\" -DXS_VERSION=\"1.2.4\" -DPIC -fPIC "-I/usr/local/lib/perl5/5.30/mach/CORE" NetCDF.c --- blib/arch/auto/NetCDF/NetCDF.so --- rm -f blib/arch/auto/NetCDF/NetCDF.so LD_RUN_PATH="/usr/local/lib" cc -shared -L/usr/local/lib/perl5/5.30/mach/CORE -lperl -L/usr/local/lib -fstack-protector-strong NetCDF.o -o blib/arch/auto/NetCDF/NetCDF.so -lnetcdf chmod 755 blib/arch/auto/NetCDF/NetCDF.so --- dynamic --- returning to directory /construction/math/p5-NetCDF/netcdf-perl-1.2.4/src/perl test ! -f perl/so_locations || chmod a+w perl/so_locations -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> p5-NetCDF-1.2.4_6 depends on package: perl5>=5.30.r1<5.31 - found -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for p5-NetCDF-1.2.4_6 ===> Generating temporary packing list making `install' in directory /construction/math/p5-NetCDF/netcdf-perl-1.2.4/src/perl cp NetCDF.pm blib/lib/NetCDF.pm AutoSplitting blib/lib/NetCDF.pm (blib/lib/auto/NetCDF) Running Mkbootstrap for NetCDF () chmod 644 "NetCDF.bs" "/usr/local/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- NetCDF.bs blib/arch/auto/NetCDF/NetCDF.bs 644 cc -c -I/usr/local/include -DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -DUSE_THREAD_SAFE_LOCALE -fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_FORTIFY_SOURCE=2 -pipe -O2 -fno-strict-aliasing -DVERSION=\"1.2.4\" -DXS_VERSION=\"1.2.4\" -DPIC -fPIC "-I/usr/local/lib/perl5/5.30/mach/CORE" NetCDF.c rm -f blib/arch/auto/NetCDF/NetCDF.so LD_RUN_PATH="/usr/local/lib" cc -shared -L/usr/local/lib/perl5/5.30/mach/CORE -lperl -L/usr/local/lib -fstack-protector-strong NetCDF.o -o blib/arch/auto/NetCDF/NetCDF.so -lnetcdf chmod 755 blib/arch/auto/NetCDF/NetCDF.so Files found in blib/arch: installing files in blib/lib into architecture dependent library tree Installing /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/NetCDF/NetCDF.so Installing /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/mach/5.30/NetCDF.pm Installing /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/mach/5.30/auto/NetCDF/autosplit.ix returning to directory /construction/math/p5-NetCDF/netcdf-perl-1.2.4/src /usr/bin/make installed_manuals MANDIR=/construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/man mkdir -p /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/man/man1 chmod u+rwx,g+rws,o=rx /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/man/man1 case `uname -s` in OSF1*|IRIX*|HP-UX) sed -e '/^\.TH/s/$D\ate: \([0-9]*\)\/\([0-9]*\)\/\([0-9]*\).*\$/\1-\2-\3/' netCDFPerl.1 > /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/man/man1/netCDFPerl.1;; *) sed -e '/^\.TH/s/$D\ate: \([0-9]*\)\/\([0-9]*\)\/\([0-9]*\).*\$/\1-\2-\3/' netCDFPerl.1 | cat | cat > /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/man/man1/netCDFPerl.1;; esac extension=`echo netCDFPerl.1 | sed 's/[^.]*\.//'`; subchapter=`echo $extension | sed 's/.//'`; case "$subchapter" in '') ;; *) chapter=`echo $extension | sed 's/\(.\).*/\1/'`; if test -d /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/man/man1$subchapter; then : true; else mkdir /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/man/man1$subchapter; fi; rm -f /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/man/man1$subchapter/netCDFPerl.1; ln -s ../`basename /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/man/man1`/netCDFPerl.1 /construction/math/p5-NetCDF/stage/usr/local/lib/perl5/site_perl/man/man1$subchapter/netCDFPerl.1; ;; esac ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Error: /usr/local/lib/perl5/site_perl/mach/5.30/auto/NetCDF/NetCDF.so is linked to /usr/local/lib/libhdf5_hl.so.100 from science/hdf5 but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libhdf5_hl.so:science/hdf5 Error: /usr/local/lib/perl5/site_perl/mach/5.30/auto/NetCDF/NetCDF.so is linked to /usr/local/lib/libhdf5.so.103 from science/hdf5 but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libhdf5.so:science/hdf5 Error: /usr/local/lib/perl5/site_perl/mach/5.30/auto/NetCDF/NetCDF.so is linked to /usr/local/lib/libcurl.so.4 from ftp/curl but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libcurl.so:ftp/curl Error: /usr/local/lib/perl5/site_perl/mach/5.30/auto/NetCDF/NetCDF.so is linked to /usr/local/lib/libsz.so.2 from science/szip but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libsz.so:science/szip Error: /usr/local/lib/perl5/site_perl/mach/5.30/auto/NetCDF/NetCDF.so is linked to /usr/local/lib/libnghttp2.so.14 from www/libnghttp2 but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libnghttp2.so:www/libnghttp2 Error: /usr/local/lib/perl5/site_perl/mach/5.30/auto/NetCDF/NetCDF.so is linked to /usr/local/lib/libssl.so.11 from security/openssl but it is not declared as a dependency Warning: you need USES=ssl Error: /usr/local/lib/perl5/site_perl/mach/5.30/auto/NetCDF/NetCDF.so is linked to /usr/local/lib/libcrypto.so.11 from security/openssl but it is not declared as a dependency Warning: you need USES=ssl Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for p5-NetCDF-1.2.4_6 file sizes/checksums [5]: . done packing files [5]: . done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Friday, 14 FEB 2020 at 17:14:08 UTC Duration: 00:00:30