=> Building math/hipmcl Started : Saturday, 15 FEB 2020 at 15:04:22 UTC Platform: 5.7-DEVELOPMENT DragonFly v5.7.0.1432.g9cd86-DEVELOPMENT #23: Thu Feb 13 14:43:04 PST 2020 root@sting.dragonflybsd.org:/usr/obj/usr/src/sys/X86_64_GENERIC x86_64 -------------------------------------------------- -- Environment -------------------------------------------------- UNAME_r=5.7-SYNTH UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=DragonFly 5.7-SYNTH UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 TERM=dumb PKG_CACHEDIR=/var/cache/pkg8 PKG_DBDIR=/var/db/pkg8 PORTSDIR=/xports LANG=C HOME=/root USER=root -------------------------------------------------- -- Options -------------------------------------------------- -------------------------------------------------- -- CONFIGURE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/math/hipmcl XDG_CONFIG_HOME=/construction/math/hipmcl HOME=/construction/math/hipmcl TMPDIR="/tmp" PATH=/construction/math/hipmcl/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 CMAKE_PREFIX_PATH="/usr/local" -------------------------------------------------- -- CONFIGURE_ARGS -------------------------------------------------- -------------------------------------------------- -- MAKE_ENV -------------------------------------------------- XDG_DATA_HOME=/construction/math/hipmcl XDG_CONFIG_HOME=/construction/math/hipmcl HOME=/construction/math/hipmcl TMPDIR="/tmp" PATH=/construction/math/hipmcl/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" -------------------------------------------------- -- MAKE_ARGS -------------------------------------------------- DESTDIR=/construction/math/hipmcl/stage -------------------------------------------------- -- PLIST_SUB -------------------------------------------------- CMAKE_BUILD_TYPE="release" OSREL=5.7 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/HipMCL" EXAMPLESDIR="share/examples/HipMCL" DATADIR="share/HipMCL" WWWDIR="www/HipMCL" ETCDIR="etc/HipMCL" -------------------------------------------------- -- SUB_LIST -------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/HipMCL DOCSDIR=/usr/local/share/doc/HipMCL EXAMPLESDIR=/usr/local/share/examples/HipMCL WWWDIR=/usr/local/www/HipMCL ETCDIR=/usr/local/etc/HipMCL -------------------------------------------------- -- /etc/make.conf -------------------------------------------------- SYNTHPROFILE=LiveSystem USE_PACKAGE_DEPENDS_ONLY=yes PACKAGE_BUILDING=yes BATCH=yes PKG_CREATE_VERBOSE=yes PORTSDIR=/xports DISTDIR=/distfiles WRKDIRPREFIX=/construction PORT_DBDIR=/options PACKAGES=/packages MAKE_JOBS_NUMBER_LIMIT=15 DPORTS_BUILDER= yes DISABLE_LICENSES= yes DEFAULT_VERSIONS= ssl=openssl FORCE_PACKAGE= yes DEVELOPER= yes HAVE_COMPAT_IA32_KERN= CONFIGURE_MAX_CMD_LEN=262144 _PERL5_FROM_BIN=5.30.1 _ALTCCVERSION_921dbbb2=none _OBJC_ALTCCVERSION_921dbbb2=none _SMP_CPUS=32 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=500709 OSVERSION=9999999 OSREL=5.7 _OSRELEASE=5.7-SYNTH PYTHONBASE=/usr/local _PKG_CHECKED=1 -------------------------------------------------------------------------------- -- Phase: check-sanity -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: pkg-depends -------------------------------------------------------------------------------- ===> HipMCL-g20180814_3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.12.0_1.txz Installing pkg-1.12.0_1... Extracting pkg-1.12.0_1: .......... done ===> HipMCL-g20180814_3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of HipMCL-g20180814_3 -------------------------------------------------------------------------------- -- Phase: fetch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: fetch -------------------------------------------------------------------------------- => HipMCL-g20180814.tar.gz doesn't seem to exist in /distfiles/. => Attempting to fetch https://bitbucket.org/azadcse/hipmcl/get/e20476acc473.tar.gz?dummy=/HipMCL-g20180814.tar.gz fetch: https://bitbucket.org/azadcse/hipmcl/get/e20476acc473.tar.gz?dummy=/HipMCL-g20180814.tar.gz: Not Found => Attempting to fetch http://distcache.FreeBSD.org/ports-distfiles/HipMCL-g20180814.tar.gz HipMCL-g20180814.tar.gz 41 MB 3026 kBps 14s ===> Fetching all distfiles required by HipMCL-g20180814_3 for building -------------------------------------------------------------------------------- -- Phase: checksum -------------------------------------------------------------------------------- ===> Fetching all distfiles required by HipMCL-g20180814_3 for building => SHA256 Checksum OK for HipMCL-g20180814.tar.gz. -------------------------------------------------------------------------------- -- Phase: extract-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: extract -------------------------------------------------------------------------------- ===> Fetching all distfiles required by HipMCL-g20180814_3 for building ===> Extracting for HipMCL-g20180814_3 => SHA256 Checksum OK for HipMCL-g20180814.tar.gz. -------------------------------------------------------------------------------- -- Phase: patch-depends -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- -- Phase: patch -------------------------------------------------------------------------------- ===> Patching for HipMCL-g20180814_3 ===> Converting DOS text files to UNIX text files ===> Applying ports patches for HipMCL-g20180814_3 -------------------------------------------------------------------------------- -- Phase: build-depends -------------------------------------------------------------------------------- ===> HipMCL-g20180814_3 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-3.16.4.txz Installing cmake-3.16.4... `-- Installing curl-7.68.0... | `-- Installing ca_root_nss-3.50... | `-- Extracting ca_root_nss-3.50: ..... done | `-- Installing libnghttp2-1.40.0... | `-- Extracting libnghttp2-1.40.0: ....... done | `-- Installing openssl-1.1.1d,1... | `-- Extracting openssl-1.1.1d,1: .......... done `-- Extracting curl-7.68.0: .......... done `-- Installing expat-2.2.8... `-- Extracting expat-2.2.8: .......... done `-- Installing jsoncpp-1.9.2... `-- Extracting jsoncpp-1.9.2: .......... done `-- Installing libarchive-3.4.0,1... | `-- Installing liblz4-1.9.2_1,1... | `-- Extracting liblz4-1.9.2_1,1: .......... done | `-- Installing lzo2-2.10_1... | `-- Extracting lzo2-2.10_1: .......... done `-- Extracting libarchive-3.4.0,1: .......... done `-- Installing libuv-1.34.2... `-- Extracting libuv-1.34.2: .......... done `-- Installing ncurses-6.1.20190525... `-- Extracting ncurses-6.1.20190525: .......... done `-- Installing rhash-1.3.5... `-- Extracting rhash-1.3.5: .......... done Extracting cmake-3.16.4: .......... done ===== Message from ca_root_nss-3.50: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem ===> HipMCL-g20180814_3 depends on file: /usr/local/bin/cmake - found ===> Returning to build of HipMCL-g20180814_3 -------------------------------------------------------------------------------- -- Phase: lib-depends -------------------------------------------------------------------------------- ===> HipMCL-g20180814_3 depends on shared library: libCombBLAS.so - not found ===> Installing existing package /packages/All/CombBLAS-1.6.2_4.txz Installing CombBLAS-1.6.2_4... `-- Installing gcc9-9.2.0_1... | `-- Installing binutils-2.33.1_2,1... | | `-- Installing gettext-runtime-0.20.1... | | `-- Installing indexinfo-0.3.1... | | `-- Extracting indexinfo-0.3.1: . done | | `-- Extracting gettext-runtime-0.20.1: .......... done | `-- Extracting binutils-2.33.1_2,1: .......... done | `-- Installing gmp-6.1.2_1... | `-- Extracting gmp-6.1.2_1: .......... done | `-- Installing mpc-1.1.0_2... | | `-- Installing mpfr-4.0.2... | | `-- Extracting mpfr-4.0.2: .......... done | `-- Extracting mpc-1.1.0_2: ...... done `-- Extracting gcc9-9.2.0_1: .......... done `-- Installing mpich-3.2.1_6... | `-- Installing gcc8-8.3.0_3... | `-- Extracting gcc8-8.3.0_3: .......... done | `-- Installing hwloc-1.11.11... | | `-- Installing libpciaccess-0.16... | | `-- Installing pciids-20200125... | | `-- Extracting pciids-20200125: ..... done | | `-- Extracting libpciaccess-0.16: ...... done | | `-- Installing libxml2-2.9.10... | | `-- Extracting libxml2-2.9.10: .......... done | `-- Extracting hwloc-1.11.11: .......... done | `-- Installing perl5-5.30.1... | `-- Extracting perl5-5.30.1: .......... done `-- Extracting mpich-3.2.1_6: .......... done Extracting CombBLAS-1.6.2_4: .......... done ===== Message from gcc9-9.2.0_1: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc9 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from gcc8-8.3.0_3: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from perl5-5.30.1: -- The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. ===== Message from mpich-3.2.1_6: -- ===> NOTICE: The mpich port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> HipMCL-g20180814_3 depends on shared library: libCombBLAS.so - found (/usr/local/lib/libCombBLAS.so) ===> Returning to build of HipMCL-g20180814_3 ===> HipMCL-g20180814_3 depends on shared library: libmpi.so - found (/usr/local/lib/libmpi.so) -------------------------------------------------------------------------------- -- Phase: configure -------------------------------------------------------------------------------- ===> Configuring for HipMCL-g20180814_3 ===> Performing out-of-source build /bin/mkdir -p /construction/math/hipmcl/.build CMake Warning (dev) at CMakeLists.txt:5 (cmake_minimum_required): Compatibility with CMake < 2.4 is not supported by CMake >= 3.0. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 8.3.0 -- The CXX compiler identification is GNU 8.3.0 -- Check for working C compiler: /usr/local/bin/mpicc -- Check for working C compiler: /usr/local/bin/mpicc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/local/bin/mpicxx -- Check for working CXX compiler: /usr/local/bin/mpicxx -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Checking to see if CXX compiler accepts flag -std=c++11 -std=c++14 -- Checking to see if CXX compiler accepts flag -std=c++11 -std=c++14 - yes -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_DEBUG CMAKE_C_FLAGS_DEBUG CMAKE_C_FLAGS_RELEASE CMAKE_MODULE_LINKER_FLAGS CMAKE_NO_BUILTIN_CHRPATH CMAKE_SHARED_LINKER_FLAGS THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /construction/math/hipmcl/.build -------------------------------------------------------------------------------- -- Phase: build -------------------------------------------------------------------------------- ===> Building for HipMCL-g20180814_3 /usr/local/bin/cmake -S/construction/math/hipmcl/azadcse-hipmcl-e20476acc473 -B/construction/math/hipmcl/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/math/hipmcl/.build/CMakeFiles /construction/math/hipmcl/.build/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all --- CMakeFiles/hipmcl.dir/all --- /usr/bin/make -f CMakeFiles/hipmcl.dir/build.make CMakeFiles/hipmcl.dir/depend --- CMakeFiles/hipmcl.dir/depend --- cd /construction/math/hipmcl/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/math/hipmcl/azadcse-hipmcl-e20476acc473 /construction/math/hipmcl/azadcse-hipmcl-e20476acc473 /construction/math/hipmcl/.build /construction/math/hipmcl/.build /construction/math/hipmcl/.build/CMakeFiles/hipmcl.dir/DependInfo.cmake Scanning dependencies of target hipmcl /usr/bin/make -f CMakeFiles/hipmcl.dir/build.make CMakeFiles/hipmcl.dir/build --- CMakeFiles/hipmcl.dir/src/HipMCL.o --- [ 50%] Building CXX object CMakeFiles/hipmcl.dir/src/HipMCL.o /usr/local/bin/mpicxx -DTHREADED -DTIMING -I/construction/math/hipmcl/.build -I/construction/math/hipmcl/azadcse-hipmcl-e20476acc473 -std=c++11 -std=c++14 -fopenmp -DNDEBUG -w -DGRAPH_GENERATOR_SEQ -O2 -DMPICH_IGNORE_CXX_SEEK -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -o CMakeFiles/hipmcl.dir/src/HipMCL.o -c /construction/math/hipmcl/azadcse-hipmcl-e20476acc473/src/HipMCL.cpp --- bin/hipmcl --- [100%] Linking CXX executable bin/hipmcl /usr/local/bin/cmake -E cmake_link_script CMakeFiles/hipmcl.dir/link.txt --verbose=1 /usr/local/bin/mpicxx -std=c++11 -std=c++14 -fopenmp -DNDEBUG -w -DGRAPH_GENERATOR_SEQ -O2 -DMPICH_IGNORE_CXX_SEEK -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -L/usr/local/lib CMakeFiles/hipmcl.dir/src/HipMCL.o -o bin/hipmcl -lCombBLAS /usr/local/bin/ld: /usr/lib/gcc80/libgomp.so: .dynsym local symbol at index 6 (>= sh_info of 1) /usr/local/bin/ld: /usr/lib/gcc80/libgomp.so: .dynsym local symbol at index 38 (>= sh_info of 1) /usr/local/bin/ld: /usr/lib/libc.so: .dynsym local symbol at index 8 (>= sh_info of 6) [100%] Built target hipmcl /usr/local/bin/cmake -E cmake_progress_start /construction/math/hipmcl/.build/CMakeFiles 0 -------------------------------------------------------------------------------- -- Phase: run-depends -------------------------------------------------------------------------------- ===> HipMCL-g20180814_3 depends on file: /usr/local/lib/gcc9/libgcc_s.so.1 - found -------------------------------------------------------------------------------- -- Phase: stage -------------------------------------------------------------------------------- ===> Staging for HipMCL-g20180814_3 ===> Generating temporary packing list install -s -m 555 /construction/math/hipmcl/.build/bin/hipmcl /construction/math/hipmcl/stage/usr/local/bin ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks -------------------------------------------------------------------------------- -- Phase: package -------------------------------------------------------------------------------- ===> Building package for HipMCL-g20180814_3 file sizes/checksums [1]: . done packing files [1]: . done packing directories [0]: . done -------------------------------------------------- -- Termination -------------------------------------------------- Finished: Saturday, 15 FEB 2020 at 15:07:25 UTC Duration: 00:03:02