------------------------------------------------------------------------------- -- Phase: Environment ------------------------------------------------------------------------------- NO_DEPENDS=1 FLAVOR=py39 UNAME_r=6.5 UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=unknown UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 LANG=C HOME=/root USER=root TERM=dumb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: showconfig ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ENV ------------------------------------------------------------------------------- PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/construction/science/py-rmf XDG_CONFIG_HOME=/construction/science/py-rmf XDG_CACHE_HOME=/construction/science/py-rmf/.cache HOME=/construction/science/py-rmf TMPDIR="/tmp" PATH=/construction/science/py-rmf/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/science/py-rmf/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ARGS ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ENV ------------------------------------------------------------------------------- XDG_DATA_HOME=/construction/science/py-rmf XDG_CONFIG_HOME=/construction/science/py-rmf XDG_CACHE_HOME=/construction/science/py-rmf/.cache HOME=/construction/science/py-rmf TMPDIR="/tmp" PATH=/construction/science/py-rmf/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/science/py-rmf/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -lRMF " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ARGS ------------------------------------------------------------------------------- DESTDIR=/construction/science/py-rmf/stage SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: PLIST_SUB ------------------------------------------------------------------------------- CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=dragonfly6 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=6.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/rmf" EXAMPLESDIR="share/examples/rmf" DATADIR="share/rmf" WWWDIR="www/rmf" ETCDIR="etc/rmf" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: SUB_LIST ------------------------------------------------------------------------------- PYTHON_INCLUDEDIR=/usr/local/include/python3.9 PYTHON_LIBDIR=/usr/local/lib/python3.9 PYTHON_PLATFORM=dragonfly6 PYTHON_SITELIBDIR=/usr/local/lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/rmf DOCSDIR=/usr/local/share/doc/rmf EXAMPLESDIR=/usr/local/share/examples/rmf WWWDIR=/usr/local/www/rmf ETCDIR=/usr/local/etc/rmf SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: /etc/make.conf ------------------------------------------------------------------------------- DPORTS_BUILDER=yes DISABLE_LICENSES=yes DEFAULT_VERSIONS=ssl=openssl FORCE_PACKAGE=yes DEVELOPER=yes DFLY_STING_XFAIL=yes USE_PACKAGE_DEPENDS_ONLY=yes PORTSDIR=/xports PORT_DBDIR=/options PKG_DBDIR=/var/db/pkg PKG_CACHEDIR=/var/cache/pkg PKG_COMPRESSION_FORMAT=.tgz DEVELOPER=1 WITH_CCACHE_BUILD=yes CCACHE_DIR=/ccache UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=600503 OSVERSION=9999999 OSREL=6.5 _OSRELEASE=6.5-SYNTH DISTDIR=/distfiles WRKDIRPREFIX=/construction BATCH=yes PACKAGE_BUILDING=yes PKG_CREATE_VERBOSE=yes MAKE_JOBS_NUMBER=13 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/pcre2-10.42.pkg Installing /packages/All/swig-4.1.1.pkg Installing /packages/All/expat-2.5.0.pkg Installing /packages/All/libuv-1.46.0.pkg Installing /packages/All/indexinfo-0.3.1.pkg Installing /packages/All/gettext-runtime-0.21.1.pkg Installing /packages/All/openssl-1.1.1u,1.pkg Installing /packages/All/rhash-1.4.3.pkg Installing /packages/All/pkg-1.19.2.pkg Installing /packages/All/liblz4-1.9.4,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/zstd-1.5.5.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libarchive-3.6.2,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/ncurses-6.4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===== Message from ncurses-6.4: -- To get the terminfo database please install the terminfo-db package: pkg install terminfo-db Installing /packages/All/cmake-core-3.26.1_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libffi-3.4.4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/mpdecimal-2.5.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/readline-8.2.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/python39-3.9.17.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===== Message from python39-3.9.17: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py39-gdbm databases/py-gdbm@py39 py39-sqlite3 databases/py-sqlite3@py39 py39-tkinter x11-toolkits/py-tkinter@py39 Installing /packages/All/ccache-3.7.12_4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc create symlink for gcc (world) create symlink for g++ create symlink for g++ (world) ===== Message from ccache-3.7.12_4: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. Installing /packages/All/icu-73.2,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/boost-libs-1.82.0_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===== Message from boost-libs-1.82.0_1: -- You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. Installing /packages/All/libaec-1.0.6.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/gmp-6.2.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/mpfr-4.2.0_1,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/mpc-1.3.1_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/binutils-2.40_4,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/gcc12-12.2.0_6.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required create symlink for gcc12 create symlink for gcc12 (world) create symlink for g++12 create symlink for g++12 (world) create symlink for cpp12 create symlink for cpp12 (world) ===== Message from gcc12-12.2.0_6: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc12 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/hdf5-1.12.2_2,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/rmf-1.5.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:00:25 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> py39-rmf-1.5.1 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> py39-rmf-1.5.1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-rmf-1.5.1 for building SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> py39-rmf-1.5.1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-rmf-1.5.1 for building => SHA256 Checksum OK for salilab-rmf-1.5.1_GH0.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> py39-rmf-1.5.1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-rmf-1.5.1 for building ===> Extracting for py39-rmf-1.5.1 => SHA256 Checksum OK for salilab-rmf-1.5.1_GH0.tar.gz. Extracted Memory Use: 53.23M SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for py39-rmf-1.5.1 ===> Applying ports patches for py39-rmf-1.5.1 from /xports/science/py-rmf/files SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> py39-rmf-1.5.1 depends on executable: swig - found ===> py39-rmf-1.5.1 depends on file: /usr/local/bin/cmake - found ===> py39-rmf-1.5.1 depends on file: /usr/local/bin/python3.9 - found ===> py39-rmf-1.5.1 depends on file: /usr/local/bin/ccache - found SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- ===> py39-rmf-1.5.1 depends on shared library: libRMF.so - found (/usr/local/lib/libRMF.so) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> py39-rmf-1.5.1 depends on executable: swig - found ===> py39-rmf-1.5.1 depends on file: /usr/local/bin/cmake - found ===> py39-rmf-1.5.1 depends on file: /usr/local/bin/python3.9 - found ===> py39-rmf-1.5.1 depends on file: /usr/local/bin/ccache - found ===> py39-rmf-1.5.1 depends on shared library: libRMF.so - found (/usr/local/lib/libRMF.so) ===> Configuring for py39-rmf-1.5.1 ===> Performing out-of-source build /bin/mkdir -p /construction/science/py-rmf/.build -- The C compiler identification is GNU 8.3.0 -- The CXX compiler identification is GNU 8.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/libexec/ccache/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/libexec/ccache/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Could NOT find Python3 (missing: Python3_NumPy_INCLUDE_DIRS NumPy) (found version "3.9.17") CMake Deprecation Warning at CMakeLists.txt:43 (cmake_policy): The OLD behavior for policy CMP0078 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1390 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1514 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2125 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:53 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1390 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1514 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2125 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:53 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1390 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1514 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2125 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:53 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1390 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1514 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2125 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:53 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1390 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1514 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2125 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:53 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1390 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1514 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2125 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:53 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1390 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1514 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2125 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:53 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1390 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1514 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2125 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:53 (find_package) -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Found Boost: /usr/local/include (found version "1.82.0") found components: system filesystem thread program_options iostreams chrono atomic regex -- Found HDF5: hdf5-shared (found version "1.12.2") -- HDF5 C compiler wrapper is unable to compile a minimal HDF5 program. -- Found HDF5: /usr/local/lib/libhdf5.so (found suitable version "1.12.2", minimum required is "1.8") -- Deprecated backends (and hdf5) are enabled -- GCC version: 8.3 -- Using g++ C++11 (or later) support -- GCC version: 8.3 -- No conversion issue -- Running Making RMF/HDF5.h -- Updating /construction/science/py-rmf/.build/include/RMF/HDF5.h -- Running Making RMF.h -- Updating /construction/science/py-rmf/.build/include/RMF.h -- Running setup_cmake.py -- Running Running setup_cmake.py -- Updating ./benchmark/Files.cmake Updating ./bin/Files.cmake Updating ./examples/Files.cmake Updating ./src/Files.cmake Updating ./test/Files.cmake Updating ./tools/dev_tools/test/Files.cmake -- Logging disabled -- Found SWIG: /usr/local/bin/swig (found suitable version "4.1.1", minimum required is "1.3.40") -- Configuring done (4.3s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_DEBUG CMAKE_C_FLAGS_DEBUG CMAKE_C_FLAGS_RELEASE CMAKE_EXE_LINKER_FLAGS CMAKE_SHARED_LINKER_FLAGS FETCHCONTENT_FULLY_DISCONNECTED Python_ADDITIONAL_VERSIONS -- Build files have been written to: /construction/science/py-rmf/.build SUCCEEDED 00:00:04 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for py39-rmf-1.5.1 /usr/local/bin/cmake -S/construction/science/py-rmf/rmf-1.5.1 -B/construction/science/py-rmf/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/science/py-rmf/.build/CMakeFiles /construction/science/py-rmf/.build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all --- include/CMakeFiles/RMF-decorators.dir/all --- --- swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/all --- --- include/CMakeFiles/RMF-decorators.dir/all --- /usr/bin/make -f include/CMakeFiles/RMF-decorators.dir/build.make include/CMakeFiles/RMF-decorators.dir/depend --- swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/all --- /usr/bin/make -f swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/build.make swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/depend --- swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/depend --- cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-1.5.1 /construction/science/py-rmf/rmf-1.5.1/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/DependInfo.cmake --- include/CMakeFiles/RMF-decorators.dir/all --- --- include/CMakeFiles/RMF-decorators.dir/depend --- cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-1.5.1 /construction/science/py-rmf/rmf-1.5.1/include /construction/science/py-rmf/.build /construction/science/py-rmf/.build/include /construction/science/py-rmf/.build/include/CMakeFiles/RMF-decorators.dir/DependInfo.cmake /usr/bin/make -f include/CMakeFiles/RMF-decorators.dir/build.make include/CMakeFiles/RMF-decorators.dir/build --- include/RMF/decorator/physics.h --- [ 14%] Making decorator headers /construction/science/py-rmf/.bin/python /construction/science/py-rmf/rmf-1.5.1/tools/build/make_decorators.py --- swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/all --- /usr/bin/make -f swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/build.make swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/build --- swig/CMakeFiles/_RMF_HDF5.dir/RMF_HDF5PYTHON.stamp --- [ 28%] Swig compile RMF_HDF5.i for python cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E make_directory /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF_HDF5.dir /construction/science/py-rmf/.build/lib /construction/science/py-rmf/.build/lib cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E touch /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF_HDF5.dir/RMF_HDF5PYTHON.stamp cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E env SWIG_LIB=/usr/local/share/swig/4.1.1 /usr/local/bin/swig -python -castmode -naturalvar -Wextra -fvirtual -DPySwigIterator=RMF_HDF5_PySwigIterator -c++ -DSwigPyIterator=RMF_HDF5_SwigPyIterator -DRMFEXPORT -outdir /construction/science/py-rmf/.build/lib -c++ -interface _RMF_HDF5 -I/construction/science/py-rmf/rmf-1.5.1/swig -I/construction/science/py-rmf/rmf-1.5.1/include -I/construction/science/py-rmf/.build/include -I/usr/local/include -I/usr/local/include/python3.9 -o /construction/science/py-rmf/.build/lib/RMF_HDF5PYTHON_wrap.cxx /construction/science/py-rmf/rmf-1.5.1/swig/RMF_HDF5.i --- include/CMakeFiles/RMF-decorators.dir/all --- [ 28%] Built target RMF-decorators --- swig/CMakeFiles/RMF_swig_compilation.dir/all --- /usr/bin/make -f swig/CMakeFiles/RMF_swig_compilation.dir/build.make swig/CMakeFiles/RMF_swig_compilation.dir/depend --- swig/CMakeFiles/RMF_swig_compilation.dir/depend --- cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-1.5.1 /construction/science/py-rmf/rmf-1.5.1/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/RMF_swig_compilation.dir/DependInfo.cmake /usr/bin/make -f swig/CMakeFiles/RMF_swig_compilation.dir/build.make swig/CMakeFiles/RMF_swig_compilation.dir/build --- swig/CMakeFiles/_RMF.dir/RMFPYTHON.stamp --- [ 42%] Swig compile RMF.i for python cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E make_directory /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF.dir /construction/science/py-rmf/.build/lib /construction/science/py-rmf/.build/lib cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E touch /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF.dir/RMFPYTHON.stamp cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E env SWIG_LIB=/usr/local/share/swig/4.1.1 /usr/local/bin/swig -python -castmode -naturalvar -Wextra -fvirtual -DPySwigIterator=RMF_PySwigIterator -c++ -DSwigPyIterator=RMF_SwigPyIterator -DRMFEXPORT -outdir /construction/science/py-rmf/.build/lib -c++ -interface _RMF -I/construction/science/py-rmf/rmf-1.5.1/swig -I/construction/science/py-rmf/rmf-1.5.1/include -I/construction/science/py-rmf/.build/include -I/usr/local/include -I/usr/local/include/python3.9 -o /construction/science/py-rmf/.build/lib/RMFPYTHON_wrap.cxx /construction/science/py-rmf/rmf-1.5.1/swig/RMF.i --- swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/all --- [ 42%] Built target RMF_HDF5_swig_compilation --- swig/CMakeFiles/_RMF_HDF5.dir/all --- /usr/bin/make -f swig/CMakeFiles/_RMF_HDF5.dir/build.make swig/CMakeFiles/_RMF_HDF5.dir/depend --- swig/CMakeFiles/_RMF_HDF5.dir/depend --- cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-1.5.1 /construction/science/py-rmf/rmf-1.5.1/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF_HDF5.dir/DependInfo.cmake /usr/bin/make -f swig/CMakeFiles/_RMF_HDF5.dir/build.make swig/CMakeFiles/_RMF_HDF5.dir/build --- swig/CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o --- [ 57%] Building CXX object swig/CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o cd /construction/science/py-rmf/.build/swig && /usr/local/libexec/ccache/c++ -DRMF_SWIG_WRAPPER -D_RMF_HDF5_EXPORTS -I/construction/science/py-rmf/rmf-1.5.1/swig -I/construction/science/py-rmf/rmf-1.5.1/include -I/construction/science/py-rmf/.build/include -I/usr/local/include -I/usr/local/include/python3.9 -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -fPIC -MD -MT swig/CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o -MF CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o.d -o CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o -c /construction/science/py-rmf/.build/lib/RMF_HDF5PYTHON_wrap.cxx --- swig/CMakeFiles/RMF_swig_compilation.dir/all --- /construction/science/py-rmf/rmf-1.5.1/include/RMF/BufferConstHandle.h:47: Warning 467: Overloaded method RMF::BufferConstHandle::BufferConstHandle(std::vector< char,std::allocator< char > > const &) not supported (incomplete type checking rule - no precedence level in typecheck typemap for 'std::vector< char,std::allocator< char > > const &'). [ 57%] Built target RMF_swig_compilation --- swig/CMakeFiles/_RMF.dir/all --- /usr/bin/make -f swig/CMakeFiles/_RMF.dir/build.make swig/CMakeFiles/_RMF.dir/depend --- swig/CMakeFiles/_RMF.dir/depend --- cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-1.5.1 /construction/science/py-rmf/rmf-1.5.1/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF.dir/DependInfo.cmake /usr/bin/make -f swig/CMakeFiles/_RMF.dir/build.make swig/CMakeFiles/_RMF.dir/build --- swig/CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o --- [ 71%] Building CXX object swig/CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o cd /construction/science/py-rmf/.build/swig && /usr/local/libexec/ccache/c++ -DRMF_SWIG_WRAPPER -D_RMF_EXPORTS -I/construction/science/py-rmf/rmf-1.5.1/swig -I/construction/science/py-rmf/rmf-1.5.1/include -I/construction/science/py-rmf/.build/include -I/usr/local/include -I/usr/local/include/python3.9 -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -fPIC -MD -MT swig/CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o -MF CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o.d -o CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o -c /construction/science/py-rmf/.build/lib/RMFPYTHON_wrap.cxx --- swig/CMakeFiles/_RMF_HDF5.dir/all --- --- lib/_RMF_HDF5.so --- [ 85%] Linking CXX shared module ../lib/_RMF_HDF5.so cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/_RMF_HDF5.dir/link.txt --verbose=1 /usr/local/libexec/ccache/c++ -fPIC -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -lRMF -shared -o ../lib/_RMF_HDF5.so CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o -L/usr/local/lib [ 85%] Built target _RMF_HDF5 --- swig/CMakeFiles/_RMF.dir/all --- --- lib/_RMF.so --- [100%] Linking CXX shared module ../lib/_RMF.so cd /construction/science/py-rmf/.build/swig && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/_RMF.dir/link.txt --verbose=1 /usr/local/libexec/ccache/c++ -fPIC -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -lRMF -shared -o ../lib/_RMF.so CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o -L/usr/local/lib [100%] Built target _RMF /usr/local/bin/cmake -E cmake_progress_start /construction/science/py-rmf/.build/CMakeFiles 0 SUCCEEDED 00:05:49 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> py39-rmf-1.5.1 depends on file: /usr/local/bin/python3.9 - found SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for py39-rmf-1.5.1 ===> py39-rmf-1.5.1 depends on file: /usr/local/bin/python3.9 - found ===> Generating temporary packing list /usr/local/bin/cmake -S/construction/science/py-rmf/rmf-1.5.1 -B/construction/science/py-rmf/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/science/py-rmf/.build/CMakeFiles /construction/science/py-rmf/.build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f include/CMakeFiles/RMF-decorators.dir/build.make include/CMakeFiles/RMF-decorators.dir/depend cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-1.5.1 /construction/science/py-rmf/rmf-1.5.1/include /construction/science/py-rmf/.build /construction/science/py-rmf/.build/include /construction/science/py-rmf/.build/include/CMakeFiles/RMF-decorators.dir/DependInfo.cmake /usr/bin/make -f include/CMakeFiles/RMF-decorators.dir/build.make include/CMakeFiles/RMF-decorators.dir/build [ 14%] Built target RMF-decorators /usr/bin/make -f swig/CMakeFiles/RMF_swig_compilation.dir/build.make swig/CMakeFiles/RMF_swig_compilation.dir/depend cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-1.5.1 /construction/science/py-rmf/rmf-1.5.1/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/RMF_swig_compilation.dir/DependInfo.cmake /usr/bin/make -f swig/CMakeFiles/RMF_swig_compilation.dir/build.make swig/CMakeFiles/RMF_swig_compilation.dir/build [ 28%] Built target RMF_swig_compilation /usr/bin/make -f swig/CMakeFiles/_RMF.dir/build.make swig/CMakeFiles/_RMF.dir/depend cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-1.5.1 /construction/science/py-rmf/rmf-1.5.1/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF.dir/DependInfo.cmake /usr/bin/make -f swig/CMakeFiles/_RMF.dir/build.make swig/CMakeFiles/_RMF.dir/build [ 57%] Built target _RMF /usr/bin/make -f swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/build.make swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/depend cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-1.5.1 /construction/science/py-rmf/rmf-1.5.1/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/DependInfo.cmake /usr/bin/make -f swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/build.make swig/CMakeFiles/RMF_HDF5_swig_compilation.dir/build [ 71%] Built target RMF_HDF5_swig_compilation /usr/bin/make -f swig/CMakeFiles/_RMF_HDF5.dir/build.make swig/CMakeFiles/_RMF_HDF5.dir/depend cd /construction/science/py-rmf/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/science/py-rmf/rmf-1.5.1 /construction/science/py-rmf/rmf-1.5.1/swig /construction/science/py-rmf/.build /construction/science/py-rmf/.build/swig /construction/science/py-rmf/.build/swig/CMakeFiles/_RMF_HDF5.dir/DependInfo.cmake /usr/bin/make -f swig/CMakeFiles/_RMF_HDF5.dir/build.make swig/CMakeFiles/_RMF_HDF5.dir/build [100%] Built target _RMF_HDF5 /usr/local/bin/cmake -E cmake_progress_start /construction/science/py-rmf/.build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall Installing the project stripped... /usr/local/bin/cmake -DCMAKE_INSTALL_DO_STRIP=1 -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /construction/science/py-rmf/stage/usr/local/lib/python3.9/site-packages/_RMF.so -- Installing: /construction/science/py-rmf/stage/usr/local/lib/python3.9/site-packages/RMF.py -- Installing: /construction/science/py-rmf/stage/usr/local/lib/python3.9/site-packages/_RMF_HDF5.so -- Installing: /construction/science/py-rmf/stage/usr/local/lib/python3.9/site-packages/RMF_HDF5.py ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Error: /usr/local/lib/python3.9/site-packages/_RMF.so is linked to /usr/local/lib/libhdf5.so.200 from science/hdf5 but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libhdf5.so:science/hdf5 Error: /usr/local/lib/python3.9/site-packages/_RMF.so is linked to /usr/local/lib/libboost_filesystem.so.1.82.0 from devel/boost-libs but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libboost_filesystem.so:devel/boost-libs Error: /usr/local/lib/python3.9/site-packages/_RMF.so is linked to /usr/local/lib/libboost_system.so.1.82.0 from devel/boost-libs but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libboost_system.so:devel/boost-libs Error: /usr/local/lib/python3.9/site-packages/_RMF.so is linked to /usr/local/lib/libboost_thread.so.1.82.0 from devel/boost-libs but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libboost_thread.so:devel/boost-libs Error: /usr/local/lib/python3.9/site-packages/_RMF.so is linked to /usr/local/lib/libboost_iostreams.so.1.82.0 from devel/boost-libs but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libboost_iostreams.so:devel/boost-libs Error: /usr/local/lib/python3.9/site-packages/_RMF.so is linked to /usr/local/lib/../lib/libsz.so.2 from science/libaec but it is not declared as a dependency Error: /usr/local/lib/python3.9/site-packages/_RMF.so is linked to /usr/local/lib/libboost_atomic.so.1.82.0 from devel/boost-libs but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libboost_atomic.so:devel/boost-libs Error: /usr/local/lib/python3.9/site-packages/_RMF.so is linked to /usr/local/lib/libaec.so.0 from science/libaec but it is not declared as a dependency Warning: you need LIB_DEPENDS+=libaec.so:science/libaec Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:02 ------------------------------------------------------------------------------- -- Phase: check-plist ------------------------------------------------------------------------------- ====> Checking for pkg-plist issues (check-plist) ===> Parsing plist ===> Checking for items in STAGEDIR missing from pkg-plist ===> Checking for items in pkg-plist which are not in STAGEDIR ===> No pkg-plist issues found (check-plist) SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for py39-rmf-1.5.1 file sizes/checksums [4]: 0% file sizes/checksums [4]: 100% Service unavailablepacking files [4]: 0% packing files [4]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:02 TOTAL TIME 00:06:27