------------------------------------------------------------------------------- -- Phase: Environment ------------------------------------------------------------------------------- NO_DEPENDS=1 UNAME_r=6.5 UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=unknown UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 LANG=C HOME=/root USER=root TERM=dumb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: showconfig ------------------------------------------------------------------------------- ===> The following configuration options are available for pnetcdf-1.12.3_1: ====> MPI (Message Passing Interface) support: you have to select exactly one of them OPENMPI=on: Parallel processing support via Open MPI MPICH=off: Parallel processing support via MPICH 3 ===> Use 'make config' to modify these settings SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ENV ------------------------------------------------------------------------------- F77="gfortran12" F90="gfortran12" FC="gfortran12" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc12" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc12" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch" MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/construction/science/pnetcdf XDG_CONFIG_HOME=/construction/science/pnetcdf XDG_CACHE_HOME=/construction/science/pnetcdf/.cache HOME=/construction/science/pnetcdf TMPDIR="/tmp" PATH=/construction/science/pnetcdf/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/science/pnetcdf/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CONFIG_SITE=/xports/Templates/config.site lt_cv_sys_max_cmd_len=262144 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ARGS ------------------------------------------------------------------------------- --with-mpi=/usr/local/mpi/openmpi ac_cv_fc_compiler_nag=no --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ENV ------------------------------------------------------------------------------- F77="gfortran12" F90="gfortran12" FC="gfortran12" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc12" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc12" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch" PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/construction/science/pnetcdf XDG_CONFIG_HOME=/construction/science/pnetcdf XDG_CACHE_HOME=/construction/science/pnetcdf/.cache HOME=/construction/science/pnetcdf TMPDIR="/tmp" PATH=/construction/science/pnetcdf/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/science/pnetcdf/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -fPIC -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin " LIBS="" CXX="c++" CXXFLAGS=" -pipe -fPIC -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ARGS ------------------------------------------------------------------------------- DESTDIR=/construction/science/pnetcdf/stage SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: PLIST_SUB ------------------------------------------------------------------------------- OSREL=6.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.32.1 PERL_VER=5.32 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.32 PROFILE="@comment " DOCSDIR="share/doc/pnetcdf" EXAMPLESDIR="share/examples/pnetcdf" DATADIR="share/pnetcdf" WWWDIR="www/pnetcdf" ETCDIR="etc/pnetcdf" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: SUB_LIST ------------------------------------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/pnetcdf DOCSDIR=/usr/local/share/doc/pnetcdf EXAMPLESDIR=/usr/local/share/examples/pnetcdf WWWDIR=/usr/local/www/pnetcdf ETCDIR=/usr/local/etc/pnetcdf SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: /etc/make.conf ------------------------------------------------------------------------------- DPORTS_BUILDER=yes DISABLE_LICENSES=yes DEFAULT_VERSIONS=ssl=openssl FORCE_PACKAGE=yes DEVELOPER=yes DFLY_STING_XFAIL=yes USE_PACKAGE_DEPENDS_ONLY=yes PORTSDIR=/xports PORT_DBDIR=/options PKG_DBDIR=/var/db/pkg PKG_CACHEDIR=/var/cache/pkg PKG_COMPRESSION_FORMAT=.tgz DEVELOPER=1 WITH_CCACHE_BUILD=yes CCACHE_DIR=/ccache UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=600503 OSVERSION=9999999 OSREL=6.5 _OSRELEASE=6.5-SYNTH DISTDIR=/distfiles WRKDIRPREFIX=/construction BATCH=yes PACKAGE_BUILDING=yes PKG_CREATE_VERBOSE=yes MAKE_JOBS_NUMBER=13 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/indexinfo-0.3.1.pkg Installing /packages/All/gmp-6.2.1.pkg Installing /packages/All/mpfr-4.2.0_1,1.pkg Installing /packages/All/mpc-1.3.1_1.pkg UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/liblz4-1.9.4,1.pkg Installing /packages/All/zstd-1.5.5.pkg Installing /packages/All/gettext-runtime-0.21.1.pkg Installing /packages/All/binutils-2.40_4,1.pkg Installing /packages/All/gcc12-12.2.0_6.pkg ===== Message from gcc12-12.2.0_6: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc12 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/gmake-4.3_2.pkg Installing /packages/All/perl5-5.32.1_3.pkg Installing /packages/All/ccache-3.7.12_4.pkg Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc create symlink for gcc (world) create symlink for g++ create symlink for g++ (world) create symlink for gcc12 create symlink for gcc12 (world) create symlink for g++12 create symlink for g++12 (world) create symlink for cpp12 create symlink for cpp12 (world) ===== Message from ccache-3.7.12_4: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. Installing /packages/All/libpciaccess-0.17.pkg Installing /packages/All/level-zero-1.12.0.pkg Installing /packages/All/ncurses-6.4.pkg ===== Message from ncurses-6.4: -- To get the terminfo database please install the terminfo-db package: pkg install terminfo-db Installing /packages/All/readline-8.2.1.pkg Installing /packages/All/libxml2-2.10.4.pkg Installing /packages/All/hwloc2-2.8.0.pkg Installing /packages/All/libltdl-2.4.7.pkg Installing /packages/All/openssl-1.1.1u,1.pkg Installing /packages/All/libevent-2.1.12.pkg Installing /packages/All/libgpg-error-1.47.pkg Installing /packages/All/libgcrypt-1.10.2.pkg Installing /packages/All/munge-0.5.15.pkg Installing /packages/All/openmpi-4.1.5_1.pkg ===== Message from openmpi-4.1.5_1: -- ===> NOTICE: The openmpi port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:00:11 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> pnetcdf-1.12.3_1 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> pnetcdf-1.12.3_1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by pnetcdf-1.12.3_1 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> pnetcdf-1.12.3_1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by pnetcdf-1.12.3_1 for building => SHA256 Checksum OK for pnetcdf-1.12.3.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> pnetcdf-1.12.3_1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by pnetcdf-1.12.3_1 for building ===> Extracting for pnetcdf-1.12.3_1 => SHA256 Checksum OK for pnetcdf-1.12.3.tar.gz. Extracted Memory Use: 14.87M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for pnetcdf-1.12.3_1 ===> Applying ports patches for pnetcdf-1.12.3_1 from /xports/science/pnetcdf/files SUCCEEDED 00:00:02 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> pnetcdf-1.12.3_1 depends on executable: gfortran12 - found ===> pnetcdf-1.12.3_1 depends on package: gmake>=4.3 - found ===> pnetcdf-1.12.3_1 depends on file: /usr/local/bin/as - found ===> pnetcdf-1.12.3_1 depends on package: perl5>=5.32.r0<5.33 - found ===> pnetcdf-1.12.3_1 depends on file: /usr/local/bin/ccache - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- ===> pnetcdf-1.12.3_1 depends on shared library: libmpi_cxx.so - found (/usr/local/mpi/openmpi/lib/libmpi_cxx.so) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> pnetcdf-1.12.3_1 depends on executable: gfortran12 - found ===> pnetcdf-1.12.3_1 depends on package: gmake>=4.3 - found ===> pnetcdf-1.12.3_1 depends on file: /usr/local/bin/as - found ===> pnetcdf-1.12.3_1 depends on package: perl5>=5.32.r0<5.33 - found ===> pnetcdf-1.12.3_1 depends on file: /usr/local/bin/ccache - found ===> pnetcdf-1.12.3_1 depends on shared library: libmpi_cxx.so - found (/usr/local/mpi/openmpi/lib/libmpi_cxx.so) ===> Configuring for pnetcdf-1.12.3_1 configure: loading site script /xports/Templates/config.site checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) /usr/bin/awk checking whether gmake sets $(MAKE)... yes checking whether gmake supports nested variables... yes checking whether gmake supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... yes checking for rm... yes checking for gawk... (cached) /usr/bin/awk checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/egrep checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for sed handling option -i ... /usr/bin/sed -i '' checking for mpicc... /usr/local/mpi/openmpi/bin/mpicc checking for gcc... /usr/local/mpi/openmpi/bin/mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether /usr/local/mpi/openmpi/bin/mpicc accepts -g... yes checking for /usr/local/mpi/openmpi/bin/mpicc option to accept ISO C89... none needed checking whether /usr/local/mpi/openmpi/bin/mpicc understands -c and -o together... yes checking whether gmake supports the include directive... yes (GNU style) checking dependency style of /usr/local/mpi/openmpi/bin/mpicc... gcc3 checking for C compiler vendor... gnu checking whether gcc version is greater than 10.0.0... no checking base compiler command in MPICC wrapper... cc checking for cc... /usr/local/libexec/ccache/cc checking how to run the C preprocessor... cpp checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for MPI_Comm_rank... yes checking for MPI_File_open... yes checking MPI Standard version implemented... 3.1 checking whether MPICH_VERSION is declared... no checking whether MPICH2_VERSION is declared... no checking whether OMPI_MAJOR_VERSION is declared... yes checking whether MVAPICH2_VERSION is declared... no checking MPI vendor... unknown checking whether /usr/local/mpi/openmpi/bin/mpicc is a wrapper of a C++ compiler... no checking build system type... x86_64-portbld-dragonfly6.5 checking host system type... x86_64-portbld-dragonfly6.5 checking the archiver (/usr/local/bin/ar) interface... ar checking how to print strings... printf checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for fgrep... (cached) /usr/bin/fgrep checking for ld used by /usr/local/mpi/openmpi/bin/mpicc... /usr/local/bin/ld checking if the linker (/usr/local/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm checking the name lister (/usr/local/bin/nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 262144 checking how to convert x86_64-portbld-dragonfly6.5 file names to x86_64-portbld-dragonfly6.5 format... func_convert_file_noop checking how to convert x86_64-portbld-dragonfly6.5 file names to toolchain format... func_convert_file_noop checking for /usr/local/bin/ld option to reload object files... -r checking for objdump... /usr/local/bin/objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... /usr/local/bin/ranlib checking command to parse /usr/local/bin/nm output from /usr/local/mpi/openmpi/bin/mpicc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... .libs checking if /usr/local/mpi/openmpi/bin/mpicc supports -fno-rtti -fno-exceptions... no checking for /usr/local/mpi/openmpi/bin/mpicc option to produce PIC... -fPIC -DPIC checking if /usr/local/mpi/openmpi/bin/mpicc PIC flag -fPIC -DPIC works... yes checking if /usr/local/mpi/openmpi/bin/mpicc static flag -static works... no checking if /usr/local/mpi/openmpi/bin/mpicc supports -c -o file.o... yes checking if /usr/local/mpi/openmpi/bin/mpicc supports -c -o file.o... (cached) yes checking whether the /usr/local/mpi/openmpi/bin/mpicc linker (/usr/local/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... dragonfly6.5 ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for mpicxx... /usr/local/mpi/openmpi/bin/mpicxx checking whether we are using the GNU C++ compiler... yes checking whether /usr/local/mpi/openmpi/bin/mpicxx accepts -g... yes checking dependency style of /usr/local/mpi/openmpi/bin/mpicxx... gcc3 checking how to run the C++ preprocessor... /usr/local/mpi/openmpi/bin/mpicxx -E checking for ld used by /usr/local/mpi/openmpi/bin/mpicxx... /usr/local/bin/ld checking if the linker (/usr/local/bin/ld) is GNU ld... yes checking whether the /usr/local/mpi/openmpi/bin/mpicxx linker (/usr/local/bin/ld) supports shared libraries... yes checking for /usr/local/mpi/openmpi/bin/mpicxx option to produce PIC... -fPIC -DPIC checking if /usr/local/mpi/openmpi/bin/mpicxx PIC flag -fPIC -DPIC works... yes checking if /usr/local/mpi/openmpi/bin/mpicxx static flag -static works... no checking if /usr/local/mpi/openmpi/bin/mpicxx supports -c -o file.o... yes checking if /usr/local/mpi/openmpi/bin/mpicxx supports -c -o file.o... (cached) yes checking whether the /usr/local/mpi/openmpi/bin/mpicxx linker (/usr/local/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... dragonfly6.5 ld.so checking how to hardcode library paths into programs... immediate checking for C++ compiler vendor... gnu checking base compiler command in MPICXX wrapper... c++ checking for c++... /usr/local/libexec/ccache/c++ checking for MPI_File_close... yes checking whether MPI C++ compiler redefines SEEK_SET ... no checking for mpif77... /usr/local/mpi/openmpi/bin/mpif77 checking for mpif90... /usr/local/mpi/openmpi/bin/mpif90 checking whether we are using the GNU Fortran 77 compiler... yes checking whether /usr/local/mpi/openmpi/bin/mpif77 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for /usr/local/mpi/openmpi/bin/mpif77 option to produce PIC... -fPIC checking if /usr/local/mpi/openmpi/bin/mpif77 PIC flag -fPIC works... yes checking if /usr/local/mpi/openmpi/bin/mpif77 static flag -static works... no checking if /usr/local/mpi/openmpi/bin/mpif77 supports -c -o file.o... yes checking if /usr/local/mpi/openmpi/bin/mpif77 supports -c -o file.o... (cached) yes checking whether the /usr/local/mpi/openmpi/bin/mpif77 linker (/usr/local/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... dragonfly6.5 ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from /usr/local/mpi/openmpi/bin/mpif77... -v checking for Fortran 77 libraries of /usr/local/mpi/openmpi/bin/mpif77... -L/usr/local/lib/gcc12 -L/usr/local/mpi/openmpi/lib -L/usr/local/bin -L/usr/local/lib/gcc12/gcc/x86_64-portbld-dragonfly6.5/12.2.0 -L/usr/local/lib/gcc12/gcc/x86_64-portbld-dragonfly6.5/12.2.0/../../../../../x86_64-portbld-dragonfly6.5/lib -L/usr/local/lib/gcc12/gcc/x86_64-portbld-dragonfly6.5/12.2.0/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread checking whether /usr/local/mpi/openmpi/bin/mpif77 is a valid MPI compiler... yes checking whether we are using the GNU Fortran compiler... yes checking whether /usr/local/mpi/openmpi/bin/mpif90 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for /usr/local/mpi/openmpi/bin/mpif90 option to produce PIC... -fPIC checking if /usr/local/mpi/openmpi/bin/mpif90 PIC flag -fPIC works... yes checking if /usr/local/mpi/openmpi/bin/mpif90 static flag -static works... no checking if /usr/local/mpi/openmpi/bin/mpif90 supports -c -o file.o... yes checking if /usr/local/mpi/openmpi/bin/mpif90 supports -c -o file.o... (cached) yes checking whether the /usr/local/mpi/openmpi/bin/mpif90 linker (/usr/local/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... dragonfly6.5 ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from /usr/local/mpi/openmpi/bin/mpif90... -v checking for Fortran libraries of /usr/local/mpi/openmpi/bin/mpif90... -L/usr/local/lib/gcc12 -L/usr/local/mpi/openmpi/lib -L/usr/local/bin -L/usr/local/lib/gcc12/gcc/x86_64-portbld-dragonfly6.5/12.2.0 -L/usr/local/lib/gcc12/gcc/x86_64-portbld-dragonfly6.5/12.2.0/../../../../../x86_64-portbld-dragonfly6.5/lib -L/usr/local/lib/gcc12/gcc/x86_64-portbld-dragonfly6.5/12.2.0/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread checking whether mpi.mod is available... yes checking whether /usr/local/mpi/openmpi/bin/mpif90 is a valid MPI compiler... yes checking for Fortran flag needed to accept free-form source... -ffree-form checking for Fortran flag to compile preprocessed .F files... none checking for Fortran flag to compile preprocessed .F90 files... none checking for Fortran flag to compile preprocessed .F files... (cached) none checking how to define symbols for preprocessed Fortran... -D checking for Fortran flag to compile .f files... none checking for Fortran flag to compile .F files... none checking for Fortran flag to compile .f90 files... none checking for Fortran flag to compile .F90 files... none checking for Fortran compiler vendor... gnu checking base compiler command in MPIF90 wrapper... gfortran12 checking for gfortran12... /usr/local/bin/gfortran12 checking for Fortran flag needed to accept fixed-form source... -ffixed-form checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking for C-equivalent to Fortran routine "SUB_A"... sub_a_ checking Fortran compiler treating constant modifier... 8 checking Fortran 90 module extension... mod checking Fortran 90 module inclusion flag... -I checking Fortran 90 module extension... (cached) mod checking whether Fortran 90 compiler capitalizes .mod filenames... no checking for m4... m4 checking m4 additional flags... none needed checking for stdbool.h that conforms to C99... (cached) yes checking for _Bool... (cached) yes checking for inline... inline checking for IEEE floating point format... yes checking whether strdup is declared... (cached) yes checking for strdup... (cached) yes checking whether strerror is declared... yes checking for strerror... (cached) yes checking whether access is declared... yes checking for access... yes checking whether truncate is declared... yes checking for truncate... (cached) yes checking whether unlink is declared... (cached) yes checking for unlink... (cached) yes checking whether strcasecmp is declared... yes checking for strcasecmp... (cached) yes checking for search.h... (cached) yes checking whether tsearch is declared... yes checking for tsearch... (cached) yes checking whether tdelete is declared... yes checking for tdelete... yes checking size of MPI_Offset... 8 checking size of MPI_Aint... 8 checking whether MPI_COMBINER_HVECTOR_INTEGER is defined... no checking whether MPI_COMBINER_HINDEXED_INTEGER is defined... no checking whether MPI_COMBINER_STRUCT_INTEGER is defined... no checking whether char is unsigned... no checking whether byte ordering is bigendian... no checking for size_t... (cached) yes checking for off_t... (cached) yes checking for ssize_t... (cached) yes checking for ptrdiff_t... (cached) yes checking for schar... no checking for uchar... no checking for ushort... yes checking for uint... yes checking for longlong... no checking for ulonglong... no checking for int64... no checking for uint64... no checking size of size_t... 8 checking size of off_t... 8 checking size of char... 1 checking size of signed char... 1 checking size of unsigned char... 1 checking size of short... 2 checking size of unsigned short int... 2 checking size of unsigned short... 2 checking size of int... 4 checking size of unsigned int... 4 checking size of long... 8 checking size of float... 4 checking size of double... 8 checking size of long long... 8 checking size of unsigned long long... 8 checking size of ptrdiff_t... 8 checking size of ushort... 2 checking size of uint... 4 checking size of MPI_Fint... 4 checking for /usr/local/bin/nm... /usr/local/bin/nm checking nm flags... checking for C-equivalent to Fortran routine "SUB"... sub_ checking for Fortran "integer*1"... yes checking for Fortran "integer*2"... yes checking for Fortran "integer*8"... yes checking if Fortran "integer*1" is ... "signed char" in C checking if Fortran "integer*2" is ... "short" in C checking if Fortran "integer*8" is ... "int" in C checking if Fortran "integer" is ... "int" in C checking if Fortran "real" is ... "float" in C checking if Fortran "doubleprecision" is ... "double" in C checking for Fortran 77 GNU intrinsic INT... yes checking for Fortran 77 intrinsic INT1... no checking for Fortran 77 intrinsic INT2... yes checking for Fortran 77 intrinsic INT8... yes checking for gcov... gcov checking if C++ macro __func__ or __FUNCTION__ is defined... yes checking whether FFLAGS already includes -fallow-argument-mismatch... no checking whether MPIF77 accepts option -fallow-argument-mismatch... yes checking whether FCFLAGS already includes -fallow-argument-mismatch... yes checking for latex... no checking for dvipdf... no checking for mpiexec... /usr/local/mpi/openmpi/bin/mpiexec checking C compiler for serial utility programs... /usr/local/libexec/ccache/cc checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/dispatchers/Makefile config.status: creating src/libs/Makefile config.status: creating src/include/Makefile config.status: creating src/include/pnetcdf.h config.status: creating src/drivers/Makefile config.status: creating src/drivers/common/Makefile config.status: creating src/drivers/include/Makefile config.status: creating src/drivers/ncmpio/Makefile config.status: creating src/drivers/nc4io/Makefile config.status: creating src/drivers/ncadios/Makefile config.status: creating src/drivers/ncbbio/Makefile config.status: creating src/drivers/ncfoo/Makefile config.status: creating src/binding/Makefile config.status: creating src/binding/cxx/Makefile config.status: creating src/binding/f77/Makefile config.status: creating src/binding/f77/pnetcdf.inc config.status: creating src/binding/f90/Makefile config.status: creating src/binding/f90/pnetcdf.f90 config.status: creating src/binding/f90/api.fh config.status: creating src/binding/f90/nfmpi_constants.fh config.status: creating src/utils/Makefile config.status: creating src/utils/ncoffsets/Makefile config.status: creating src/utils/pnetcdf_version/Makefile config.status: creating src/utils/ncvalidator/Makefile config.status: creating src/utils/ncmpidiff/Makefile config.status: creating src/utils/ncmpidump/Makefile config.status: creating src/utils/ncmpigen/Makefile config.status: creating src/utils/ncmpilogdump/Makefile config.status: creating src/utils/pnetcdf-config config.status: creating src/packaging/Makefile config.status: creating src/packaging/pnetcdf.pc config.status: creating examples/Makefile config.status: creating examples/adios/Makefile config.status: creating examples/C/Makefile config.status: creating examples/tutorial/Makefile config.status: creating examples/CXX/Makefile config.status: creating examples/F77/Makefile config.status: creating examples/F90/Makefile config.status: creating examples/burst_buffer/Makefile config.status: creating benchmarks/Makefile config.status: creating benchmarks/C/Makefile config.status: creating benchmarks/FLASH-IO/Makefile config.status: creating doc/Makefile config.status: creating doc/pnetcdf-api/Makefile config.status: creating man/Makefile config.status: creating test/Makefile config.status: creating test/common/Makefile config.status: creating test/C/Makefile config.status: creating test/fandc/Makefile config.status: creating test/nc_test/Makefile config.status: creating test/cdf_format/Makefile config.status: creating test/nc4/Makefile config.status: creating test/adios/Makefile config.status: creating test/header/Makefile config.status: creating test/testcases/Makefile config.status: creating test/nonblocking/Makefile config.status: creating test/largefile/Makefile config.status: creating test/CXX/Makefile config.status: creating test/subfile/Makefile config.status: creating test/nf_test/Makefile config.status: creating test/nf_test/tests.inc config.status: creating test/nf90_test/Makefile config.status: creating test/nf90_test/tests.inc config.status: creating test/F90/Makefile config.status: creating test/burst_buffer/Makefile config.status: creating src/include/config.h config.status: executing depfiles commands config.status: executing libtool commands ------------------------------------------------------------------------------ PnetCDF Version 1.12.3 Features: Build static libraries - yes Build shared libraries - no Build Fortran APIs - yes Build C++ APIs - yes Compilers: MPICC = /usr/local/mpi/openmpi/bin/mpicc MPICXX = /usr/local/mpi/openmpi/bin/mpicxx MPIF77 = /usr/local/mpi/openmpi/bin/mpif77 MPIF90 = /usr/local/mpi/openmpi/bin/mpif90 CFLAGS = -pipe -fPIC -O2 -fno-strict-aliasing CXXFLAGS = -pipe -fPIC -O2 -fno-strict-aliasing FFLAGS = -O -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch FCFLAGS = -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch LDFLAGS = -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin Now run 'make' to build the library and utility tools. Then run 'make []' for testing and installation, where the optional can be: tests - build all test programs (build only, no run) check - run sequential test programs ptest - run parallel test programs on 4 MPI processes ptests - run parallel test programs on 3,4,6,8 MPI processes install - install PnetCDF library in /usr/local ------------------------------------------------------------------------------ SUCCEEDED 00:00:41 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for pnetcdf-1.12.3_1 gmake[1]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3' Making all in src gmake[2]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src' Making all in include gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/include' gmake all-am gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/include' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/include' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/include' Making all in dispatchers gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/dispatchers' m4 -DPNETCDF -I../../m4 attr_getput.m4 >attr_getput.c m4 -DPNETCDF -I../../m4 var_getput.m4 >var_getput.c gmake all-am gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/dispatchers' /bin/sh ../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT lib_version.lo -MD -MP -MF .deps/lib_version.Tpo -c -o lib_version.lo lib_version.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT lib_version.lo -MD -MP -MF .deps/lib_version.Tpo -c lib_version.c -o lib_version.o mv -f .deps/lib_version.Tpo .deps/lib_version.Plo /bin/sh ../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT file.lo -MD -MP -MF .deps/file.Tpo -c -o file.lo file.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT file.lo -MD -MP -MF .deps/file.Tpo -c file.c -o file.o mv -f .deps/file.Tpo .deps/file.Plo /bin/sh ../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT dimension.lo -MD -MP -MF .deps/dimension.Tpo -c -o dimension.lo dimension.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT dimension.lo -MD -MP -MF .deps/dimension.Tpo -c dimension.c -o dimension.o mv -f .deps/dimension.Tpo .deps/dimension.Plo /bin/sh ../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT variable.lo -MD -MP -MF .deps/variable.Tpo -c -o variable.lo variable.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT variable.lo -MD -MP -MF .deps/variable.Tpo -c variable.c -o variable.o mv -f .deps/variable.Tpo .deps/variable.Plo /bin/sh ../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT attribute.lo -MD -MP -MF .deps/attribute.Tpo -c -o attribute.lo attribute.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT attribute.lo -MD -MP -MF .deps/attribute.Tpo -c attribute.c -o attribute.o mv -f .deps/attribute.Tpo .deps/attribute.Plo /bin/sh ../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT error_codes.lo -MD -MP -MF .deps/error_codes.Tpo -c -o error_codes.lo error_codes.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT error_codes.lo -MD -MP -MF .deps/error_codes.Tpo -c error_codes.c -o error_codes.o mv -f .deps/error_codes.Tpo .deps/error_codes.Plo /bin/sh ../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT attr_getput.lo -MD -MP -MF .deps/attr_getput.Tpo -c -o attr_getput.lo attr_getput.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT attr_getput.lo -MD -MP -MF .deps/attr_getput.Tpo -c attr_getput.c -o attr_getput.o mv -f .deps/attr_getput.Tpo .deps/attr_getput.Plo /bin/sh ../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT var_getput.lo -MD -MP -MF .deps/var_getput.Tpo -c -o var_getput.lo var_getput.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/include -I../../src/include -I../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT var_getput.lo -MD -MP -MF .deps/var_getput.Tpo -c var_getput.c -o var_getput.o mv -f .deps/var_getput.Tpo .deps/var_getput.Plo /bin/sh ../../libtool --tag=CC --mode=link /usr/local/mpi/openmpi/bin/mpicc -pipe -fPIC -O2 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -o libdispatchers.la lib_version.lo file.lo dimension.lo variable.lo attribute.lo error_codes.lo attr_getput.lo var_getput.lo libtool: link: /usr/local/bin/ar cru .libs/libdispatchers.a lib_version.o file.o dimension.o variable.o attribute.o error_codes.o attr_getput.o var_getput.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: /usr/local/bin/ranlib .libs/libdispatchers.a libtool: link: ( cd ".libs" && rm -f "libdispatchers.la" && ln -s "../libdispatchers.la" "libdispatchers.la" ) gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/dispatchers' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/dispatchers' Making all in drivers gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers' Making all in include gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/include' m4 -DPNETCDF -I../../../m4 ncx_h.m4 >ncx.h gmake all-am gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/include' gmake[5]: Nothing to be done for 'all-am'. gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/include' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/include' Making all in common gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/common' m4 -DPNETCDF -I../../../m4 -DERANGE_FILL ncx.m4 >ncx.c m4 -DPNETCDF -I../../../m4 -DERANGE_FILL convert_swap.m4 >convert_swap.c gmake all-am gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/common' /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT utf8proc.lo -MD -MP -MF .deps/utf8proc.Tpo -c -o utf8proc.lo utf8proc.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT utf8proc.lo -MD -MP -MF .deps/utf8proc.Tpo -c utf8proc.c -o utf8proc.o mv -f .deps/utf8proc.Tpo .deps/utf8proc.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT mem_alloc.lo -MD -MP -MF .deps/mem_alloc.Tpo -c -o mem_alloc.lo mem_alloc.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT mem_alloc.lo -MD -MP -MF .deps/mem_alloc.Tpo -c mem_alloc.c -o mem_alloc.o mv -f .deps/mem_alloc.Tpo .deps/mem_alloc.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT dtype_decode.lo -MD -MP -MF .deps/dtype_decode.Tpo -c -o dtype_decode.lo dtype_decode.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT dtype_decode.lo -MD -MP -MF .deps/dtype_decode.Tpo -c dtype_decode.c -o dtype_decode.o mv -f .deps/dtype_decode.Tpo .deps/dtype_decode.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT create_imaptype.lo -MD -MP -MF .deps/create_imaptype.Tpo -c -o create_imaptype.lo create_imaptype.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT create_imaptype.lo -MD -MP -MF .deps/create_imaptype.Tpo -c create_imaptype.c -o create_imaptype.o mv -f .deps/create_imaptype.Tpo .deps/create_imaptype.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT error_mpi2nc.lo -MD -MP -MF .deps/error_mpi2nc.Tpo -c -o error_mpi2nc.lo error_mpi2nc.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT error_mpi2nc.lo -MD -MP -MF .deps/error_mpi2nc.Tpo -c error_mpi2nc.c -o error_mpi2nc.o mv -f .deps/error_mpi2nc.Tpo .deps/error_mpi2nc.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT check_name.lo -MD -MP -MF .deps/check_name.Tpo -c -o check_name.lo check_name.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT check_name.lo -MD -MP -MF .deps/check_name.Tpo -c check_name.c -o check_name.o mv -f .deps/check_name.Tpo .deps/check_name.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT pack_unpack.lo -MD -MP -MF .deps/pack_unpack.Tpo -c -o pack_unpack.lo pack_unpack.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT pack_unpack.lo -MD -MP -MF .deps/pack_unpack.Tpo -c pack_unpack.c -o pack_unpack.o mv -f .deps/pack_unpack.Tpo .deps/pack_unpack.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT utils.lo -MD -MP -MF .deps/utils.Tpo -c -o utils.lo utils.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT utils.lo -MD -MP -MF .deps/utils.Tpo -c utils.c -o utils.o mv -f .deps/utils.Tpo .deps/utils.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT error_posix2nc.lo -MD -MP -MF .deps/error_posix2nc.Tpo -c -o error_posix2nc.lo error_posix2nc.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT error_posix2nc.lo -MD -MP -MF .deps/error_posix2nc.Tpo -c error_posix2nc.c -o error_posix2nc.o mv -f .deps/error_posix2nc.Tpo .deps/error_posix2nc.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT hash_map.lo -MD -MP -MF .deps/hash_map.Tpo -c -o hash_map.lo hash_map.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT hash_map.lo -MD -MP -MF .deps/hash_map.Tpo -c hash_map.c -o hash_map.o mv -f .deps/hash_map.Tpo .deps/hash_map.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -fno-strict-aliasing -MT ncx.lo -MD -MP -MF .deps/ncx.Tpo -c -o ncx.lo ncx.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -fno-strict-aliasing -MT ncx.lo -MD -MP -MF .deps/ncx.Tpo -c ncx.c -o ncx.o mv -f .deps/ncx.Tpo .deps/ncx.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT convert_swap.lo -MD -MP -MF .deps/convert_swap.Tpo -c -o convert_swap.lo convert_swap.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT convert_swap.lo -MD -MP -MF .deps/convert_swap.Tpo -c convert_swap.c -o convert_swap.o mv -f .deps/convert_swap.Tpo .deps/convert_swap.Plo /bin/sh ../../../libtool --tag=CC --mode=link /usr/local/mpi/openmpi/bin/mpicc -pipe -fPIC -O2 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -o libcommon.la utf8proc.lo mem_alloc.lo dtype_decode.lo create_imaptype.lo error_mpi2nc.lo check_name.lo pack_unpack.lo utils.lo error_posix2nc.lo hash_map.lo ncx.lo convert_swap.lo libtool: link: /usr/local/bin/ar cru .libs/libcommon.a utf8proc.o mem_alloc.o dtype_decode.o create_imaptype.o error_mpi2nc.o check_name.o pack_unpack.o utils.o error_posix2nc.o hash_map.o ncx.o convert_swap.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: /usr/local/bin/ranlib .libs/libcommon.a libtool: link: ( cd ".libs" && rm -f "libcommon.la" && ln -s "../libcommon.la" "libcommon.la" ) gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/common' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/common' Making all in ncmpio gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/ncmpio' m4 -DPNETCDF -I../../../m4 -DERANGE_FILL ncmpio_getput.m4 >ncmpio_getput.c m4 -DPNETCDF -I../../../m4 -DERANGE_FILL ncmpio_i_getput.m4 >ncmpio_i_getput.c m4 -DPNETCDF -I../../../m4 -DERANGE_FILL ncmpio_varn.m4 >ncmpio_varn.c m4 -DPNETCDF -I../../../m4 -DERANGE_FILL ncmpio_i_varn.m4 >ncmpio_i_varn.c m4 -DPNETCDF -I../../../m4 -DERANGE_FILL ncmpio_attr.m4 >ncmpio_attr.c gmake all-am gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/ncmpio' /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_driver.lo -MD -MP -MF .deps/ncmpio_driver.Tpo -c -o ncmpio_driver.lo ncmpio_driver.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_driver.lo -MD -MP -MF .deps/ncmpio_driver.Tpo -c ncmpio_driver.c -o ncmpio_driver.o mv -f .deps/ncmpio_driver.Tpo .deps/ncmpio_driver.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_create.lo -MD -MP -MF .deps/ncmpio_create.Tpo -c -o ncmpio_create.lo ncmpio_create.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_create.lo -MD -MP -MF .deps/ncmpio_create.Tpo -c ncmpio_create.c -o ncmpio_create.o mv -f .deps/ncmpio_create.Tpo .deps/ncmpio_create.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_open.lo -MD -MP -MF .deps/ncmpio_open.Tpo -c -o ncmpio_open.lo ncmpio_open.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_open.lo -MD -MP -MF .deps/ncmpio_open.Tpo -c ncmpio_open.c -o ncmpio_open.o mv -f .deps/ncmpio_open.Tpo .deps/ncmpio_open.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_enddef.lo -MD -MP -MF .deps/ncmpio_enddef.Tpo -c -o ncmpio_enddef.lo ncmpio_enddef.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_enddef.lo -MD -MP -MF .deps/ncmpio_enddef.Tpo -c ncmpio_enddef.c -o ncmpio_enddef.o mv -f .deps/ncmpio_enddef.Tpo .deps/ncmpio_enddef.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_close.lo -MD -MP -MF .deps/ncmpio_close.Tpo -c -o ncmpio_close.lo ncmpio_close.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_close.lo -MD -MP -MF .deps/ncmpio_close.Tpo -c ncmpio_close.c -o ncmpio_close.o mv -f .deps/ncmpio_close.Tpo .deps/ncmpio_close.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_sync.lo -MD -MP -MF .deps/ncmpio_sync.Tpo -c -o ncmpio_sync.lo ncmpio_sync.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_sync.lo -MD -MP -MF .deps/ncmpio_sync.Tpo -c ncmpio_sync.c -o ncmpio_sync.o mv -f .deps/ncmpio_sync.Tpo .deps/ncmpio_sync.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_file_misc.lo -MD -MP -MF .deps/ncmpio_file_misc.Tpo -c -o ncmpio_file_misc.lo ncmpio_file_misc.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_file_misc.lo -MD -MP -MF .deps/ncmpio_file_misc.Tpo -c ncmpio_file_misc.c -o ncmpio_file_misc.o mv -f .deps/ncmpio_file_misc.Tpo .deps/ncmpio_file_misc.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_header_get.lo -MD -MP -MF .deps/ncmpio_header_get.Tpo -c -o ncmpio_header_get.lo ncmpio_header_get.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_header_get.lo -MD -MP -MF .deps/ncmpio_header_get.Tpo -c ncmpio_header_get.c -o ncmpio_header_get.o mv -f .deps/ncmpio_header_get.Tpo .deps/ncmpio_header_get.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_header_put.lo -MD -MP -MF .deps/ncmpio_header_put.Tpo -c -o ncmpio_header_put.lo ncmpio_header_put.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_header_put.lo -MD -MP -MF .deps/ncmpio_header_put.Tpo -c ncmpio_header_put.c -o ncmpio_header_put.o mv -f .deps/ncmpio_header_put.Tpo .deps/ncmpio_header_put.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_dim.lo -MD -MP -MF .deps/ncmpio_dim.Tpo -c -o ncmpio_dim.lo ncmpio_dim.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_dim.lo -MD -MP -MF .deps/ncmpio_dim.Tpo -c ncmpio_dim.c -o ncmpio_dim.o mv -f .deps/ncmpio_dim.Tpo .deps/ncmpio_dim.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_var.lo -MD -MP -MF .deps/ncmpio_var.Tpo -c -o ncmpio_var.lo ncmpio_var.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_var.lo -MD -MP -MF .deps/ncmpio_var.Tpo -c ncmpio_var.c -o ncmpio_var.o mv -f .deps/ncmpio_var.Tpo .deps/ncmpio_var.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_bput.lo -MD -MP -MF .deps/ncmpio_bput.Tpo -c -o ncmpio_bput.lo ncmpio_bput.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_bput.lo -MD -MP -MF .deps/ncmpio_bput.Tpo -c ncmpio_bput.c -o ncmpio_bput.o mv -f .deps/ncmpio_bput.Tpo .deps/ncmpio_bput.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_filetype.lo -MD -MP -MF .deps/ncmpio_filetype.Tpo -c -o ncmpio_filetype.lo ncmpio_filetype.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_filetype.lo -MD -MP -MF .deps/ncmpio_filetype.Tpo -c ncmpio_filetype.c -o ncmpio_filetype.o mv -f .deps/ncmpio_filetype.Tpo .deps/ncmpio_filetype.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_wait.lo -MD -MP -MF .deps/ncmpio_wait.Tpo -c -o ncmpio_wait.lo ncmpio_wait.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_wait.lo -MD -MP -MF .deps/ncmpio_wait.Tpo -c ncmpio_wait.c -o ncmpio_wait.o mv -f .deps/ncmpio_wait.Tpo .deps/ncmpio_wait.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_vard.lo -MD -MP -MF .deps/ncmpio_vard.Tpo -c -o ncmpio_vard.lo ncmpio_vard.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_vard.lo -MD -MP -MF .deps/ncmpio_vard.Tpo -c ncmpio_vard.c -o ncmpio_vard.o mv -f .deps/ncmpio_vard.Tpo .deps/ncmpio_vard.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_fill.lo -MD -MP -MF .deps/ncmpio_fill.Tpo -c -o ncmpio_fill.lo ncmpio_fill.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_fill.lo -MD -MP -MF .deps/ncmpio_fill.Tpo -c ncmpio_fill.c -o ncmpio_fill.o mv -f .deps/ncmpio_fill.Tpo .deps/ncmpio_fill.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_util.lo -MD -MP -MF .deps/ncmpio_util.Tpo -c -o ncmpio_util.lo ncmpio_util.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_util.lo -MD -MP -MF .deps/ncmpio_util.Tpo -c ncmpio_util.c -o ncmpio_util.o mv -f .deps/ncmpio_util.Tpo .deps/ncmpio_util.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_hash_func.lo -MD -MP -MF .deps/ncmpio_hash_func.Tpo -c -o ncmpio_hash_func.lo ncmpio_hash_func.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_hash_func.lo -MD -MP -MF .deps/ncmpio_hash_func.Tpo -c ncmpio_hash_func.c -o ncmpio_hash_func.o mv -f .deps/ncmpio_hash_func.Tpo .deps/ncmpio_hash_func.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_file_io.lo -MD -MP -MF .deps/ncmpio_file_io.Tpo -c -o ncmpio_file_io.lo ncmpio_file_io.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_file_io.lo -MD -MP -MF .deps/ncmpio_file_io.Tpo -c ncmpio_file_io.c -o ncmpio_file_io.o mv -f .deps/ncmpio_file_io.Tpo .deps/ncmpio_file_io.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT 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-I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_i_getput.lo -MD -MP -MF .deps/ncmpio_i_getput.Tpo -c ncmpio_i_getput.c -o ncmpio_i_getput.o mv -f .deps/ncmpio_i_getput.Tpo .deps/ncmpio_i_getput.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_varn.lo -MD -MP -MF .deps/ncmpio_varn.Tpo -c -o ncmpio_varn.lo ncmpio_varn.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_varn.lo -MD -MP -MF .deps/ncmpio_varn.Tpo -c ncmpio_varn.c -o ncmpio_varn.o mv -f .deps/ncmpio_varn.Tpo .deps/ncmpio_varn.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_i_varn.lo -MD -MP -MF .deps/ncmpio_i_varn.Tpo -c -o ncmpio_i_varn.lo ncmpio_i_varn.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_i_varn.lo -MD -MP -MF .deps/ncmpio_i_varn.Tpo -c ncmpio_i_varn.c -o ncmpio_i_varn.o mv -f .deps/ncmpio_i_varn.Tpo .deps/ncmpio_i_varn.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_attr.lo -MD -MP -MF .deps/ncmpio_attr.Tpo -c -o ncmpio_attr.lo ncmpio_attr.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/include -I../../../src/drivers/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpio_attr.lo -MD -MP -MF .deps/ncmpio_attr.Tpo -c ncmpio_attr.c -o ncmpio_attr.o mv -f .deps/ncmpio_attr.Tpo .deps/ncmpio_attr.Plo /bin/sh ../../../libtool --tag=CC --mode=link /usr/local/mpi/openmpi/bin/mpicc -pipe -fPIC -O2 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -o libncmpio.la ncmpio_driver.lo ncmpio_create.lo ncmpio_open.lo ncmpio_enddef.lo ncmpio_close.lo ncmpio_sync.lo ncmpio_file_misc.lo ncmpio_header_get.lo ncmpio_header_put.lo ncmpio_dim.lo ncmpio_var.lo ncmpio_bput.lo ncmpio_filetype.lo ncmpio_wait.lo ncmpio_vard.lo ncmpio_fill.lo ncmpio_util.lo ncmpio_hash_func.lo ncmpio_file_io.lo ncmpio_getput.lo ncmpio_i_getput.lo ncmpio_varn.lo ncmpio_i_varn.lo ncmpio_attr.lo libtool: link: /usr/local/bin/ar cru .libs/libncmpio.a ncmpio_driver.o ncmpio_create.o ncmpio_open.o ncmpio_enddef.o ncmpio_close.o ncmpio_sync.o ncmpio_file_misc.o ncmpio_header_get.o ncmpio_header_put.o ncmpio_dim.o ncmpio_var.o ncmpio_bput.o ncmpio_filetype.o ncmpio_wait.o ncmpio_vard.o ncmpio_fill.o ncmpio_util.o ncmpio_hash_func.o ncmpio_file_io.o ncmpio_getput.o ncmpio_i_getput.o ncmpio_varn.o ncmpio_i_varn.o ncmpio_attr.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: /usr/local/bin/ranlib .libs/libncmpio.a libtool: link: ( cd ".libs" && rm -f "libncmpio.la" && ln -s "../libncmpio.la" "libncmpio.la" ) gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/ncmpio' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/ncmpio' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers' gmake[4]: Nothing to be done for 'all-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers' Making all in binding gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding' Making all in cxx gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/cxx' cat ./pnetcdf.in >pnetcdf set -e; for i in ncmpi_notyet.h ncmpiCheck.h ncmpiType.h ncmpiAtt.h ncmpiEnumType.h ncmpiGroupAtt.h ncmpiGroup.h ncmpiByte.h ncmpiChar.h ncmpiCompoundType.h ncmpiDouble.h ncmpiFloat.h ncmpiInt.h ncmpiInt64.h ncmpiOpaqueType.h ncmpiShort.h ncmpiUbyte.h ncmpiUint.h ncmpiUint64.h ncmpiUshort.h ncmpiException.h ncmpiDim.h ncmpiFile.h ncmpiVarAtt.h ncmpiVar.h ncmpiVlenType.h; do ( \ /usr/bin/sed -e '/#ifndef/d' -e '/#define/d' -e '/#endif/d' -e '/#include/d' ./$i >> pnetcdf ; \ ) ; done gmake all-am gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/cxx' /bin/sh ../../../libtool --tag=CXX --mode=compile /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpi_notyet.lo -MD -MP -MF .deps/ncmpi_notyet.Tpo -c -o ncmpi_notyet.lo ncmpi_notyet.cpp libtool: compile: /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpi_notyet.lo -MD -MP -MF .deps/ncmpi_notyet.Tpo -c ncmpi_notyet.cpp -o ncmpi_notyet.o mv -f .deps/ncmpi_notyet.Tpo .deps/ncmpi_notyet.Plo /bin/sh ../../../libtool --tag=CXX --mode=compile /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiCheck.lo -MD -MP -MF .deps/ncmpiCheck.Tpo -c -o ncmpiCheck.lo ncmpiCheck.cpp libtool: compile: 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ncmpiGroup.lo -MD -MP -MF .deps/ncmpiGroup.Tpo -c ncmpiGroup.cpp -o ncmpiGroup.o mv -f .deps/ncmpiGroup.Tpo .deps/ncmpiGroup.Plo /bin/sh ../../../libtool --tag=CXX --mode=compile /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiByte.lo -MD -MP -MF .deps/ncmpiByte.Tpo -c -o ncmpiByte.lo ncmpiByte.cpp libtool: compile: /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiByte.lo -MD -MP -MF .deps/ncmpiByte.Tpo -c ncmpiByte.cpp -o ncmpiByte.o mv -f .deps/ncmpiByte.Tpo .deps/ncmpiByte.Plo /bin/sh ../../../libtool --tag=CXX --mode=compile /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiChar.lo -MD -MP -MF .deps/ncmpiChar.Tpo -c -o ncmpiChar.lo ncmpiChar.cpp libtool: compile: /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiChar.lo -MD -MP -MF .deps/ncmpiChar.Tpo -c ncmpiChar.cpp -o ncmpiChar.o mv -f .deps/ncmpiChar.Tpo .deps/ncmpiChar.Plo /bin/sh ../../../libtool --tag=CXX --mode=compile /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiCompoundType.lo -MD -MP -MF .deps/ncmpiCompoundType.Tpo -c -o ncmpiCompoundType.lo ncmpiCompoundType.cpp libtool: compile: /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiCompoundType.lo -MD -MP -MF .deps/ncmpiCompoundType.Tpo -c ncmpiCompoundType.cpp -o ncmpiCompoundType.o mv -f .deps/ncmpiCompoundType.Tpo .deps/ncmpiCompoundType.Plo /bin/sh ../../../libtool --tag=CXX --mode=compile /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiDouble.lo -MD -MP -MF .deps/ncmpiDouble.Tpo -c -o ncmpiDouble.lo ncmpiDouble.cpp libtool: compile: /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiDouble.lo -MD -MP -MF .deps/ncmpiDouble.Tpo -c ncmpiDouble.cpp -o ncmpiDouble.o mv -f .deps/ncmpiDouble.Tpo .deps/ncmpiDouble.Plo /bin/sh ../../../libtool --tag=CXX --mode=compile /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiFloat.lo -MD -MP -MF .deps/ncmpiFloat.Tpo -c -o ncmpiFloat.lo ncmpiFloat.cpp libtool: compile: /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiFloat.lo -MD -MP -MF .deps/ncmpiFloat.Tpo -c ncmpiFloat.cpp -o ncmpiFloat.o mv -f .deps/ncmpiFloat.Tpo 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/bin/sh ../../../libtool --tag=CXX --mode=compile /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiUshort.lo -MD -MP -MF .deps/ncmpiUshort.Tpo -c -o ncmpiUshort.lo ncmpiUshort.cpp libtool: compile: /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiUshort.lo -MD -MP -MF .deps/ncmpiUshort.Tpo -c ncmpiUshort.cpp -o ncmpiUshort.o mv -f .deps/ncmpiUshort.Tpo .deps/ncmpiUshort.Plo /bin/sh ../../../libtool --tag=CXX --mode=compile /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpiException.lo -MD -MP -MF .deps/ncmpiException.Tpo -c -o ncmpiException.lo ncmpiException.cpp libtool: compile: /usr/local/mpi/openmpi/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -pipe -fPIC -O2 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--tag=CXX --mode=link /usr/local/mpi/openmpi/bin/mpicxx -pipe -fPIC -O2 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -o libcxx.la ncmpi_notyet.lo ncmpiCheck.lo ncmpiType.lo ncmpiAtt.lo ncmpiEnumType.lo ncmpiGroupAtt.lo ncmpiGroup.lo ncmpiByte.lo ncmpiChar.lo ncmpiCompoundType.lo ncmpiDouble.lo ncmpiFloat.lo ncmpiInt.lo ncmpiInt64.lo ncmpiOpaqueType.lo ncmpiShort.lo ncmpiUbyte.lo ncmpiUint.lo ncmpiUint64.lo ncmpiUshort.lo ncmpiException.lo ncmpiDim.lo ncmpiFile.lo ncmpiVarAtt.lo ncmpiVar.lo ncmpiVlenType.lo libtool: link: /usr/local/bin/ar cru .libs/libcxx.a ncmpi_notyet.o ncmpiCheck.o ncmpiType.o ncmpiAtt.o ncmpiEnumType.o ncmpiGroupAtt.o ncmpiGroup.o ncmpiByte.o ncmpiChar.o ncmpiCompoundType.o ncmpiDouble.o ncmpiFloat.o ncmpiInt.o ncmpiInt64.o ncmpiOpaqueType.o ncmpiShort.o ncmpiUbyte.o ncmpiUint.o ncmpiUint64.o ncmpiUshort.o ncmpiException.o ncmpiDim.o ncmpiFile.o ncmpiVarAtt.o ncmpiVar.o ncmpiVlenType.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: /usr/local/bin/ranlib .libs/libcxx.a libtool: link: ( cd ".libs" && rm -f "libcxx.la" && ln -s "../libcxx.la" "libcxx.la" ) gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/cxx' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/cxx' Making all in f77 gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f77' /bin/sh ../../../libtool --tag=F77 --mode=compile /usr/local/mpi/openmpi/bin/mpif77 -O -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c -o strerrorf.lo strerrorf.f libtool: compile: /usr/local/mpi/openmpi/bin/mpif77 -O -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c strerrorf.f -o strerrorf.o /bin/sh ../../../libtool --tag=F77 --mode=compile /usr/local/mpi/openmpi/bin/mpif77 -O -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c -o strerrnof.lo strerrnof.f libtool: compile: /usr/local/mpi/openmpi/bin/mpif77 -O -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c strerrnof.f -o strerrnof.o /bin/sh ../../../libtool --tag=F77 --mode=compile /usr/local/mpi/openmpi/bin/mpif77 -O -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c -o inq_libversf.lo inq_libversf.f libtool: compile: /usr/local/mpi/openmpi/bin/mpif77 -O -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c inq_libversf.f -o inq_libversf.o rm -f mpifnetcdf.h issyserrf.c xstrerrorf.c xstrerrnof.c xinq_libversf.c allf.c ./buildiface -infile=../../../src/include/pnetcdf.h -deffile=./defs > allf.c /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT issyserrf.lo -MD -MP -MF .deps/issyserrf.Tpo -c -o issyserrf.lo issyserrf.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT issyserrf.lo -MD -MP -MF .deps/issyserrf.Tpo -c issyserrf.c -o issyserrf.o mv -f .deps/issyserrf.Tpo .deps/issyserrf.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT xstrerrorf.lo -MD -MP -MF .deps/xstrerrorf.Tpo -c -o xstrerrorf.lo xstrerrorf.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT xstrerrorf.lo -MD -MP -MF .deps/xstrerrorf.Tpo -c xstrerrorf.c -o xstrerrorf.o mv -f .deps/xstrerrorf.Tpo .deps/xstrerrorf.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -pipe -fPIC -O2 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.deps/xinq_libversf.Tpo .deps/xinq_libversf.Plo /bin/sh ../../../libtool --tag=CC --mode=compile /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT allf.lo -MD -MP -MF .deps/allf.Tpo -c -o allf.lo allf.c libtool: compile: /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT allf.lo -MD -MP -MF .deps/allf.Tpo -c allf.c -o allf.o mv -f .deps/allf.Tpo .deps/allf.Plo /bin/sh ../../../libtool --tag=F77 --mode=link /usr/local/mpi/openmpi/bin/mpif77 -O -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -o libf77.la strerrorf.lo strerrnof.lo inq_libversf.lo issyserrf.lo xstrerrorf.lo xstrerrnof.lo xinq_libversf.lo allf.lo libtool: link: /usr/local/bin/ar cru .libs/libf77.a strerrorf.o strerrnof.o inq_libversf.o issyserrf.o xstrerrorf.o xstrerrnof.o xinq_libversf.o allf.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: /usr/local/bin/ranlib .libs/libf77.a libtool: link: ( cd ".libs" && rm -f "libf77.la" && ln -s "../libf77.la" "libf77.la" ) gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f77' Making all in f90 gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f90' m4 -DPNETCDF -DINTENTV=INOUT getput_text.m4 >getput_text.fh m4 -DPNETCDF -DINTENTV=INOUT getput_var.m4 >getput_var.fh m4 -DPNETCDF -DINTENTV=INOUT getput_varn.m4 >getput_varn.fh m4 -DPNETCDF -DINTENTV=INOUT getput_vard.m4 >getput_vard.fh gmake all-am gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f90' /bin/sh ../../../libtool --tag=FC --mode=compile /usr/local/mpi/openmpi/bin/mpif90 -I. -I. -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c -o pnetcdf.lo pnetcdf.f90 libtool: compile: /usr/local/mpi/openmpi/bin/mpif90 -I. -I. -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c pnetcdf.f90 -o pnetcdf.o getput_vard.fh:1988:86: 1988 | nf90mpi_get_vard_7D_EightByteInt_all = nfmpi_get_vard_all(ncid, varid, filetype, buf, bufcount, buftype) | 1 ...... 2324 | nf90mpi_get_vard_7D_text_all = nfmpi_get_vard_all(ncid, varid, filetype, buf(1,1,1,1,1,1,1), bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(8)/CHARACTER(*)). getput_vard.fh:1558:86: 1558 | nf90mpi_put_vard_7D_EightByteInt_all = nfmpi_put_vard_all(ncid, varid, filetype, buf, bufcount, buftype) | 1 ...... 2253 | nf90mpi_put_vard_7D_text_all = nfmpi_put_vard_all(ncid, varid, filetype, buf(1,1,1,1,1,1,1), bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(8)/CHARACTER(*)). getput_vard.fh:1128:78: 1128 | nf90mpi_get_vard_7D_EightByteInt = nfmpi_get_vard(ncid, varid, filetype, buf, bufcount, buftype) | 1 ...... 2178 | nf90mpi_get_vard_7D_text = nfmpi_get_vard(ncid, varid, filetype, buf(1,1,1,1,1,1,1), bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(8)/CHARACTER(*)). getput_vard.fh:698:78: 698 | nf90mpi_put_vard_7D_EightByteInt = nfmpi_put_vard(ncid, varid, filetype, buf, bufcount, buftype) | 1 ...... 2107 | nf90mpi_put_vard_7D_text = nfmpi_put_vard(ncid, varid, filetype, buf(1,1,1,1,1,1,1), bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(8)/CHARACTER(*)). getput_var.fh:23249:84: 23249 | nfmpi_bput_varm(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype, req) | 1 ...... 23782 | nfmpi_bput_varm(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype, req) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:23257:79: 23257 | nfmpi_bput_vars(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype, req) | 1 ...... 23790 | nfmpi_bput_vars(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype, req) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:23265:66: 23265 | nfmpi_bput_vara(ncid, varid, localStart, localCount, values, bufcount, buftype, req) | 1 ...... 23798 | nfmpi_bput_vara(ncid, varid, localStart, localCount, values, bufcount, buftype, req) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:20047:84: 20047 | nfmpi_iget_varm(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype, req) | 1 ...... 20580 | nfmpi_iget_varm(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype, req) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:20055:79: 20055 | nfmpi_iget_vars(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype, req) | 1 ...... 20588 | nfmpi_iget_vars(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype, req) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:20063:66: 20063 | nfmpi_iget_vara(ncid, varid, localStart, localCount, values, bufcount, buftype, req) | 1 ...... 20596 | nfmpi_iget_vara(ncid, varid, localStart, localCount, values, bufcount, buftype, req) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:16845:84: 16845 | nfmpi_iput_varm(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype, req) | 1 ...... 17378 | nfmpi_iput_varm(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype, req) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:16853:79: 16853 | nfmpi_iput_vars(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype, req) | 1 ...... 17386 | nfmpi_iput_vars(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype, req) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:16861:66: 16861 | nfmpi_iput_vara(ncid, varid, localStart, localCount, values, bufcount, buftype, req) | 1 ...... 17394 | nfmpi_iput_vara(ncid, varid, localStart, localCount, values, bufcount, buftype, req) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:13645:87: 13645 | nfmpi_get_varm_all(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype) | 1 ...... 14171 | nfmpi_get_varm_all(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:13653:82: 13653 | nfmpi_get_vars_all(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype) | 1 ...... 14179 | nfmpi_get_vars_all(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:13661:69: 13661 | nfmpi_get_vara_all(ncid, varid, localStart, localCount, values, bufcount, buftype) | 1 ...... 14187 | nfmpi_get_vara_all(ncid, varid, localStart, localCount, values, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:10486:87: 10486 | nfmpi_put_varm_all(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype) | 1 ...... 11012 | nfmpi_put_varm_all(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:10494:82: 10494 | nfmpi_put_vars_all(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype) | 1 ...... 11020 | nfmpi_put_vars_all(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:10502:69: 10502 | nfmpi_put_vara_all(ncid, varid, localStart, localCount, values, bufcount, buftype) | 1 ...... 11028 | nfmpi_put_vara_all(ncid, varid, localStart, localCount, values, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:7326:83: 7326 | nfmpi_get_varm(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype) | 1 ...... 7852 | nfmpi_get_varm(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:7334:78: 7334 | nfmpi_get_vars(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype) | 1 ...... 7860 | nfmpi_get_vars(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:7342:65: 7342 | nfmpi_get_vara(ncid, varid, localStart, localCount, values, bufcount, buftype) | 1 ...... 7868 | nfmpi_get_vara(ncid, varid, localStart, localCount, values, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:4166:83: 4166 | nfmpi_put_varm(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype) | 1 ...... 4692 | nfmpi_put_varm(ncid, varid, localStart, localCount, localStride, map, values, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:4174:78: 4174 | nfmpi_put_vars(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype) | 1 ...... 4700 | nfmpi_put_vars(ncid, varid, localStart, localCount, localStride, values, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:4182:65: 4182 | nfmpi_put_vara(ncid, varid, localStart, localCount, values, bufcount, buftype) | 1 ...... 4708 | nfmpi_put_vara(ncid, varid, localStart, localCount, values, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:1513:50: 1513 | nfmpi_bput_var1(ncid, varid, localStart, buf, bufcount, buftype, req) | 1 ...... 1550 | nfmpi_bput_var1(ncid, varid, localStart, buf, bufcount, buftype, req) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:1286:50: 1286 | nfmpi_iget_var1(ncid, varid, localStart, buf, bufcount, buftype, req) | 1 ...... 1323 | nfmpi_iget_var1(ncid, varid, localStart, buf, bufcount, buftype, req) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:1059:50: 1059 | nfmpi_iput_var1(ncid, varid, localStart, buf, bufcount, buftype, req) | 1 ...... 1096 | nfmpi_iput_var1(ncid, varid, localStart, buf, bufcount, buftype, req) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:832:53: 832 | nfmpi_get_var1_all(ncid, varid, localStart, buf, bufcount, buftype) | 1 ...... 868 | nfmpi_get_var1_all(ncid, varid, localStart, buf, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:615:49: 615 | nfmpi_get_var1(ncid, varid, localStart, buf, bufcount, buftype) | 1 ...... 651 | nfmpi_get_var1(ncid, varid, localStart, buf, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:398:53: 398 | nfmpi_put_var1_all(ncid, varid, localStart, buf, bufcount, buftype) | 1 ...... 434 | nfmpi_put_var1_all(ncid, varid, localStart, buf, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). getput_var.fh:181:49: 181 | nfmpi_put_var1(ncid, varid, localStart, buf, bufcount, buftype) | 1 ...... 217 | nfmpi_put_var1(ncid, varid, localStart, buf, bufcount, buftype) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/INTEGER(8)). variables.fh:215:81: 215 | nf90mpi_inq_var_fill_FourByteReal = nfmpi_inq_var_fill(ncid, varid, no_fill, fill_value) | 1 ...... 224 | nf90mpi_inq_var_fill_EightByteReal = nfmpi_inq_var_fill(ncid, varid, no_fill, fill_value) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/REAL(8)). variables.fh:151:81: 151 | nf90mpi_def_var_fill_FourByteReal = nfmpi_def_var_fill(ncid, varid, no_fill, fill_value) | 1 ...... 159 | nf90mpi_def_var_fill_EightByteReal = nfmpi_def_var_fill(ncid, varid, no_fill, fill_value) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/REAL(8)). /bin/sh ../../../libtool --tag=FC --mode=link /usr/local/mpi/openmpi/bin/mpif90 -I. -I. -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -o libf90.la pnetcdf.lo libtool: link: /usr/local/bin/ar cru .libs/libf90.a pnetcdf.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: /usr/local/bin/ranlib .libs/libf90.a libtool: link: ( cd ".libs" && rm -f "libf90.la" && ln -s "../libf90.la" "libf90.la" ) gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f90' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f90' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding' gmake[4]: Nothing to be done for 'all-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding' Making all in packaging gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/packaging' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/packaging' Making all in . gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src' gmake[3]: Nothing to be done for 'all-am'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src' Making all in libs gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/libs' /bin/sh ../../libtool --tag=CXX --mode=link /usr/local/mpi/openmpi/bin/mpicxx -pipe -fPIC -O2 -fno-strict-aliasing -version-info 4:3:0 -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -o libpnetcdf.la -rpath /usr/local/lib ../dispatchers/libdispatchers.la ../drivers/common/libcommon.la ../drivers/ncmpio/libncmpio.la ../binding/cxx/libcxx.la ../binding/f77/libf77.la ../binding/f90/libf90.la libtool: link: (cd .libs/libpnetcdf.lax/libdispatchers.a && /usr/local/bin/ar x "/construction/science/pnetcdf/pnetcdf-1.12.3/src/libs/../dispatchers/.libs/libdispatchers.a") libtool: link: (cd .libs/libpnetcdf.lax/libcommon.a && /usr/local/bin/ar x "/construction/science/pnetcdf/pnetcdf-1.12.3/src/libs/../drivers/common/.libs/libcommon.a") libtool: link: (cd .libs/libpnetcdf.lax/libncmpio.a && /usr/local/bin/ar x "/construction/science/pnetcdf/pnetcdf-1.12.3/src/libs/../drivers/ncmpio/.libs/libncmpio.a") libtool: link: (cd .libs/libpnetcdf.lax/libcxx.a && /usr/local/bin/ar x "/construction/science/pnetcdf/pnetcdf-1.12.3/src/libs/../binding/cxx/.libs/libcxx.a") libtool: link: (cd .libs/libpnetcdf.lax/libf77.a && /usr/local/bin/ar x "/construction/science/pnetcdf/pnetcdf-1.12.3/src/libs/../binding/f77/.libs/libf77.a") libtool: link: (cd .libs/libpnetcdf.lax/libf90.a && /usr/local/bin/ar x "/construction/science/pnetcdf/pnetcdf-1.12.3/src/libs/../binding/f90/.libs/libf90.a") libtool: link: /usr/local/bin/ar cru .libs/libpnetcdf.a .libs/libpnetcdf.lax/libdispatchers.a/attr_getput.o .libs/libpnetcdf.lax/libdispatchers.a/attribute.o .libs/libpnetcdf.lax/libdispatchers.a/dimension.o .libs/libpnetcdf.lax/libdispatchers.a/error_codes.o .libs/libpnetcdf.lax/libdispatchers.a/file.o .libs/libpnetcdf.lax/libdispatchers.a/lib_version.o .libs/libpnetcdf.lax/libdispatchers.a/var_getput.o .libs/libpnetcdf.lax/libdispatchers.a/variable.o .libs/libpnetcdf.lax/libcommon.a/check_name.o .libs/libpnetcdf.lax/libcommon.a/convert_swap.o .libs/libpnetcdf.lax/libcommon.a/create_imaptype.o .libs/libpnetcdf.lax/libcommon.a/dtype_decode.o .libs/libpnetcdf.lax/libcommon.a/error_mpi2nc.o .libs/libpnetcdf.lax/libcommon.a/error_posix2nc.o .libs/libpnetcdf.lax/libcommon.a/hash_map.o .libs/libpnetcdf.lax/libcommon.a/mem_alloc.o .libs/libpnetcdf.lax/libcommon.a/ncx.o .libs/libpnetcdf.lax/libcommon.a/pack_unpack.o .libs/libpnetcdf.lax/libcommon.a/utf8proc.o .libs/libpnetcdf.lax/libcommon.a/utils.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_attr.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_bput.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_close.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_create.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_dim.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_driver.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_enddef.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_file_io.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_file_misc.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_filetype.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_fill.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_getput.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_hash_func.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_header_get.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_header_put.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_i_getput.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_i_varn.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_open.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_sync.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_util.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_var.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_vard.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_varn.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_wait.o .libs/libpnetcdf.lax/libcxx.a/ncmpiAtt.o .libs/libpnetcdf.lax/libcxx.a/ncmpiByte.o .libs/libpnetcdf.lax/libcxx.a/ncmpiChar.o .libs/libpnetcdf.lax/libcxx.a/ncmpiCheck.o .libs/libpnetcdf.lax/libcxx.a/ncmpiCompoundType.o .libs/libpnetcdf.lax/libcxx.a/ncmpiDim.o .libs/libpnetcdf.lax/libcxx.a/ncmpiDouble.o .libs/libpnetcdf.lax/libcxx.a/ncmpiEnumType.o .libs/libpnetcdf.lax/libcxx.a/ncmpiException.o .libs/libpnetcdf.lax/libcxx.a/ncmpiFile.o .libs/libpnetcdf.lax/libcxx.a/ncmpiFloat.o .libs/libpnetcdf.lax/libcxx.a/ncmpiGroup.o .libs/libpnetcdf.lax/libcxx.a/ncmpiGroupAtt.o .libs/libpnetcdf.lax/libcxx.a/ncmpiInt.o .libs/libpnetcdf.lax/libcxx.a/ncmpiInt64.o .libs/libpnetcdf.lax/libcxx.a/ncmpiOpaqueType.o .libs/libpnetcdf.lax/libcxx.a/ncmpiShort.o .libs/libpnetcdf.lax/libcxx.a/ncmpiType.o .libs/libpnetcdf.lax/libcxx.a/ncmpiUbyte.o .libs/libpnetcdf.lax/libcxx.a/ncmpiUint.o .libs/libpnetcdf.lax/libcxx.a/ncmpiUint64.o .libs/libpnetcdf.lax/libcxx.a/ncmpiUshort.o .libs/libpnetcdf.lax/libcxx.a/ncmpiVar.o .libs/libpnetcdf.lax/libcxx.a/ncmpiVarAtt.o .libs/libpnetcdf.lax/libcxx.a/ncmpiVlenType.o .libs/libpnetcdf.lax/libcxx.a/ncmpi_notyet.o .libs/libpnetcdf.lax/libf77.a/allf.o .libs/libpnetcdf.lax/libf77.a/inq_libversf.o .libs/libpnetcdf.lax/libf77.a/issyserrf.o .libs/libpnetcdf.lax/libf77.a/strerrnof.o .libs/libpnetcdf.lax/libf77.a/strerrorf.o .libs/libpnetcdf.lax/libf77.a/xinq_libversf.o .libs/libpnetcdf.lax/libf77.a/xstrerrnof.o .libs/libpnetcdf.lax/libf77.a/xstrerrorf.o .libs/libpnetcdf.lax/libf90.a/pnetcdf.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: /usr/local/bin/ranlib .libs/libpnetcdf.a libtool: link: rm -fr .libs/libpnetcdf.lax libtool: link: ( cd ".libs" && rm -f "libpnetcdf.la" && ln -s "../libpnetcdf.la" "libpnetcdf.la" ) gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/libs' Making all in utils gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils' Making all in ncmpigen gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpigen' /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -pipe -fPIC -O2 -fno-strict-aliasing -MT main.o -MD -MP -MF .deps/main.Tpo -c -o main.o main.c mv -f .deps/main.Tpo .deps/main.Po /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -pipe -fPIC -O2 -fno-strict-aliasing -MT load.o -MD -MP -MF .deps/load.Tpo -c -o load.o load.c mv -f .deps/load.Tpo .deps/load.Po /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -pipe -fPIC -O2 -fno-strict-aliasing -MT escapes.o -MD -MP -MF .deps/escapes.Tpo -c -o escapes.o escapes.c mv -f .deps/escapes.Tpo .deps/escapes.Po /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -pipe -fPIC -O2 -fno-strict-aliasing -MT getfill.o -MD -MP -MF .deps/getfill.Tpo -c -o getfill.o getfill.c mv -f .deps/getfill.Tpo .deps/getfill.Po /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -pipe -fPIC -O2 -fno-strict-aliasing -MT init.o -MD -MP -MF .deps/init.Tpo -c -o init.o init.c mv -f .deps/init.Tpo .deps/init.Po /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -pipe -fPIC -O2 -fno-strict-aliasing -MT genlib.o -MD -MP -MF .deps/genlib.Tpo -c -o genlib.o genlib.c mv -f .deps/genlib.Tpo .deps/genlib.Po /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpigentab.o -MD -MP -MF .deps/ncmpigentab.Tpo -c -o ncmpigentab.o ncmpigentab.c mv -f .deps/ncmpigentab.Tpo .deps/ncmpigentab.Po /bin/sh ../../../libtool --tag=CC --mode=link /usr/local/mpi/openmpi/bin/mpicc -pipe -fPIC -O2 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -o ncmpigen main.o load.o escapes.o getfill.o init.o genlib.o ncmpigentab.o ../../../src/libs/libpnetcdf.la libtool: link: /usr/local/mpi/openmpi/bin/mpicc -pipe -fPIC -O2 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc12 -B/usr/local/bin -o ncmpigen main.o load.o escapes.o getfill.o init.o genlib.o ncmpigentab.o -L/usr/local/lib/gcc12 ../../../src/libs/.libs/libpnetcdf.a /usr/local/mpi/openmpi/lib/libmpi_usempi.so /usr/local/mpi/openmpi/lib/libmpi_mpifh.so /usr/local/mpi/openmpi/lib/libmpi_cxx.so /usr/local/mpi/openmpi/lib/libmpi.so -pthread -Wl,-rpath -Wl,/usr/local/mpi/openmpi/lib -Wl,-rpath -Wl,/usr/local/mpi/openmpi/lib gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpigen' Making all in ncmpidump gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpidump' /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpidump.o -MD -MP -MF .deps/ncmpidump.Tpo -c -o ncmpidump.o ncmpidump.c mv -f .deps/ncmpidump.Tpo .deps/ncmpidump.Po /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT vardata.o -MD -MP -MF .deps/vardata.Tpo -c -o vardata.o vardata.c mv -f .deps/vardata.Tpo .deps/vardata.Po /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT dumplib.o -MD -MP -MF .deps/dumplib.Tpo -c -o dumplib.o dumplib.c mv -f .deps/dumplib.Tpo .deps/dumplib.Po /bin/sh ../../../libtool --tag=CC --mode=link /usr/local/mpi/openmpi/bin/mpicc -pipe -fPIC -O2 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -o ncmpidump ncmpidump.o vardata.o dumplib.o ../../../src/libs/libpnetcdf.la libtool: link: /usr/local/mpi/openmpi/bin/mpicc -pipe -fPIC -O2 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc12 -B/usr/local/bin -o ncmpidump ncmpidump.o vardata.o dumplib.o -L/usr/local/lib/gcc12 ../../../src/libs/.libs/libpnetcdf.a /usr/local/mpi/openmpi/lib/libmpi_usempi.so /usr/local/mpi/openmpi/lib/libmpi_mpifh.so /usr/local/mpi/openmpi/lib/libmpi_cxx.so /usr/local/mpi/openmpi/lib/libmpi.so -pthread -Wl,-rpath -Wl,/usr/local/mpi/openmpi/lib -Wl,-rpath -Wl,/usr/local/mpi/openmpi/lib gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpidump' Making all in ncmpidiff gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpidiff' /usr/local/mpi/openmpi/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/include -I../../../src/include -I../../../src/include -pipe -fPIC -O2 -fno-strict-aliasing -MT ncmpidiff.o -MD -MP -MF .deps/ncmpidiff.Tpo -c -o ncmpidiff.o ncmpidiff.c mv -f .deps/ncmpidiff.Tpo .deps/ncmpidiff.Po /bin/sh ../../../libtool --tag=CC --mode=link /usr/local/mpi/openmpi/bin/mpicc -pipe -fPIC -O2 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -o ncmpidiff ncmpidiff.o ../../../src/libs/libpnetcdf.la libtool: link: /usr/local/mpi/openmpi/bin/mpicc -pipe -fPIC -O2 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc12 -B/usr/local/bin -o ncmpidiff ncmpidiff.o -L/usr/local/lib/gcc12 ../../../src/libs/.libs/libpnetcdf.a /usr/local/mpi/openmpi/lib/libmpi_usempi.so /usr/local/mpi/openmpi/lib/libmpi_mpifh.so /usr/local/mpi/openmpi/lib/libmpi_cxx.so /usr/local/mpi/openmpi/lib/libmpi.so -pthread -Wl,-rpath -Wl,/usr/local/mpi/openmpi/lib -Wl,-rpath -Wl,/usr/local/mpi/openmpi/lib /usr/local/libexec/ccache/cc -I../../../src/utils/ncvalidator -o cdfdiff cdfdiff.c gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpidiff' Making all in ncvalidator gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncvalidator' /usr/local/libexec/ccache/cc -o ncvalidator ncvalidator.c gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncvalidator' Making all in pnetcdf_version gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/pnetcdf_version' /usr/local/libexec/ccache/cc -DMPICC="\"/usr/local/mpi/openmpi/bin/mpicc\"" -DCFLAGS="\"-pipe -fPIC -O2 -fno-strict-aliasing \"" -DCONFIGURE_ARGS_CLEAN="\"--with-mpi=/usr/local/mpi/openmpi ac_cv_fc_compiler_nag=no --prefix=/usr/local --localstatedir=/var --mandir=/usr/local/man --disable-silent-rules --infodir=/usr/local/share/info/ --build=x86_64-portbld-dragonfly6.5\"" -DPNETCDF_VERSION="\"1.12.3\"" -DMPICXX="\"/usr/local/mpi/openmpi/bin/mpicxx\"" -DCXXFLAGS="\"-pipe -fPIC -O2 -fno-strict-aliasing \"" -DMPIF77="\"/usr/local/mpi/openmpi/bin/mpif77\"" -DFFLAGS="\"-O -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch\"" -DMPIF90="\"/usr/local/mpi/openmpi/bin/mpif90\"" -DFCFLAGS="\"-Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch\"" -o pnetcdf_version pnetcdf_version.c gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/pnetcdf_version' Making all in ncoffsets gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncoffsets' /usr/local/libexec/ccache/cc -o ncoffsets ncoffsets.c gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncoffsets' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils' gmake[4]: Nothing to be done for 'all-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils' gmake[2]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src' Making all in man gmake[2]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/man' m4 -DPNETCDF -DAPI=C -DPNETCDF_VERSION=1.12.3 pnetcdf.m4 > pnetcdf.3 || rm -f pnetcdf.3 m4 -DPNETCDF -DAPI=F -DPNETCDF_VERSION=1.12.3 pnetcdf.m4 > pnetcdf_f77.3 || rm -f pnetcdf_f77.3 m4 -DPNETCDF -DPNETCDF_VERSION=1.12.3 pnetcdf_f90.m4 > pnetcdf_f90.3 || rm -f pnetcdf_f90.3 gmake[2]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/man' Making all in examples gmake[2]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples' Making all in C gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/C' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/C' Making all in CXX gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/CXX' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/CXX' Making all in F77 gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/F77' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/F77' Making all in F90 gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/F90' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/F90' Making all in tutorial gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/tutorial' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/tutorial' gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples' gmake[3]: Nothing to be done for 'all-am'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples' gmake[2]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples' Making all in benchmarks gmake[2]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks' Making all in C gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks/C' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks/C' Making all in FLASH-IO gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks/FLASH-IO' /usr/local/mpi/openmpi/bin/mpif90 -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/binding/f90 -ffree-form -I. -DN_DIM=3 -DMAXBLOCKS=100 -DIONMAX=13 -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c -o get_mfluid_property.o get_mfluid_property.F90 /usr/local/mpi/openmpi/bin/mpif90 -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/binding/f90 -ffree-form -I. -DN_DIM=3 -DMAXBLOCKS=100 -DIONMAX=13 -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c -o flash_release.o flash_release.F90 /usr/local/mpi/openmpi/bin/mpif90 -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/binding/f90 -ffree-form -I. -DN_DIM=3 -DMAXBLOCKS=100 -DIONMAX=13 -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c -o flash_benchmark_io.o flash_benchmark_io.F90 flash_benchmark_io.F90:236:23: 221 | call MPI_Reduce(chk_t, tmax, 3, MPI_DOUBLE_PRECISION, MPI_MAX, & | 2 ...... 236 | call MPI_Reduce(chk_io, bw, 1, MPI_DOUBLE_PRECISION, MPI_SUM, & | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) flash_benchmark_io.F90:236:31: 221 | call MPI_Reduce(chk_t, tmax, 3, MPI_DOUBLE_PRECISION, MPI_MAX, & | 2 ...... 236 | call MPI_Reduce(chk_io, bw, 1, MPI_DOUBLE_PRECISION, MPI_SUM, & | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) flash_benchmark_io.F90:239:23: 221 | call MPI_Reduce(chk_t, tmax, 3, MPI_DOUBLE_PRECISION, MPI_MAX, & | 2 ...... 239 | call MPI_Reduce(nocorner_io, bw, 1, MPI_DOUBLE_PRECISION, MPI_SUM, & | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) flash_benchmark_io.F90:239:36: 221 | call MPI_Reduce(chk_t, tmax, 3, MPI_DOUBLE_PRECISION, MPI_MAX, & | 2 ...... 239 | call MPI_Reduce(nocorner_io, bw, 1, MPI_DOUBLE_PRECISION, MPI_SUM, & | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) flash_benchmark_io.F90:242:23: 221 | call MPI_Reduce(chk_t, tmax, 3, MPI_DOUBLE_PRECISION, MPI_MAX, & | 2 ...... 242 | call MPI_Reduce(corner_io, bw, 1, MPI_DOUBLE_PRECISION, MPI_SUM, & | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) flash_benchmark_io.F90:242:34: 221 | call MPI_Reduce(chk_t, tmax, 3, MPI_DOUBLE_PRECISION, MPI_MAX, & | 2 ...... 242 | call MPI_Reduce(corner_io, bw, 1, MPI_DOUBLE_PRECISION, MPI_SUM, & | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) flash_benchmark_io.F90:303:26: 221 | call MPI_Reduce(chk_t, tmax, 3, MPI_DOUBLE_PRECISION, MPI_MAX, & | 2 ...... 303 | call MPI_Reduce(malloc_size, sum_size, 1, MPI_OFFSET, MPI_SUM, & | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(8)/REAL(8)). flash_benchmark_io.F90:303:39: 221 | call MPI_Reduce(chk_t, tmax, 3, MPI_DOUBLE_PRECISION, MPI_MAX, & | 2 ...... 303 | call MPI_Reduce(malloc_size, sum_size, 1, MPI_OFFSET, MPI_SUM, & | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(8)/REAL(8)). flash_benchmark_io.F90:79:21: 74 | call MPI_Bcast(isArgvRight, 1, MPI_LOGICAL, MasterPE, & | 2 ...... 79 | call MPI_Bcast(basenm, 128, MPI_CHARACTER, MasterPE, & | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (CHARACTER(128)/LOGICAL(4)). flash_benchmark_io.F90:129:39: 122 | nocorner_io = plotfile_ncmpi_par(0, simtime, .false.) | 2 ...... 129 | corner_io = plotfile_ncmpi_par(0,0.e0,.true.) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/REAL(8)). /usr/local/mpi/openmpi/bin/mpif90 -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/binding/f90 -ffree-form -I. -DN_DIM=3 -DMAXBLOCKS=100 -DIONMAX=13 -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c -o checkpoint_ncmpi_parallel.o checkpoint_ncmpi_parallel.F90 /usr/local/mpi/openmpi/bin/mpif90 -DHAVE_CONFIG_H -I. -I../../src/include -I../../src/binding/f90 -ffree-form -I. -DN_DIM=3 -DMAXBLOCKS=100 -DIONMAX=13 -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -c -o plotfile_ncmpi_parallel.o plotfile_ncmpi_parallel.F90 /bin/sh ../../libtool --tag=FC --mode=link /usr/local/mpi/openmpi/bin/mpif90 -I../../src/binding/f90 -ffree-form -I. -DN_DIM=3 -DMAXBLOCKS=100 -DIONMAX=13 -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -L../../src/libs -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -o flash_benchmark_io get_mfluid_property.o flash_release.o flash_benchmark_io.o checkpoint_ncmpi_parallel.o plotfile_ncmpi_parallel.o -lpnetcdf libtool: link: /usr/local/mpi/openmpi/bin/mpif90 -I../../src/binding/f90 -ffree-form -I. -DN_DIM=3 -DMAXBLOCKS=100 -DIONMAX=13 -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc12 -B/usr/local/bin -o flash_benchmark_io get_mfluid_property.o flash_release.o flash_benchmark_io.o checkpoint_ncmpi_parallel.o plotfile_ncmpi_parallel.o -L../../src/libs -L/usr/local/lib/gcc12 /construction/science/pnetcdf/pnetcdf-1.12.3/src/libs/.libs/libpnetcdf.a /usr/local/mpi/openmpi/lib/libmpi_usempi.so /usr/local/mpi/openmpi/lib/libmpi_mpifh.so /usr/local/mpi/openmpi/lib/libmpi_cxx.so /usr/local/mpi/openmpi/lib/libmpi.so -pthread -Wl,-rpath -Wl,/usr/local/mpi/openmpi/lib -Wl,-rpath -Wl,/usr/local/mpi/openmpi/lib gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks/FLASH-IO' gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks' gmake[3]: Nothing to be done for 'all-am'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks' gmake[2]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks' Making all in test gmake[2]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test' Making all in common gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/common' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/common' Making all in C gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/C' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/C' Making all in fandc gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/fandc' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/fandc' Making all in nc_test gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nc_test' m4 -DPNETCDF -I../../m4 tests.h.m4 > tests.h gmake all-am gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nc_test' gmake[4]: Nothing to be done for 'all-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nc_test' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nc_test' Making all in cdf_format gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/cdf_format' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/cdf_format' Making all in header gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/header' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/header' Making all in testcases gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/testcases' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/testcases' Making all in nonblocking gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nonblocking' m4 -DPNETCDF -I../../m4 bput_varn.m4 >bput_varn.c m4 -DPNETCDF -I../../m4 column_wise.m4 >column_wise.c gmake all-am gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nonblocking' gmake[4]: Nothing to be done for 'all-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nonblocking' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nonblocking' Making all in CXX gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/CXX' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/CXX' Making all in nf_test gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nf_test' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nf_test' Making all in nf90_test gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nf90_test' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nf90_test' Making all in F90 gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/F90' gmake[3]: Nothing to be done for 'all'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/F90' gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test' gmake[3]: Nothing to be done for 'all-am'. gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test' gmake[2]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test' gmake[2]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3' gmake[2]: Nothing to be done for 'all-am'. gmake[2]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3' gmake[1]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3' SUCCEEDED 00:02:40 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> pnetcdf-1.12.3_1 depends on executable: gfortran12 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for pnetcdf-1.12.3_1 ===> pnetcdf-1.12.3_1 depends on executable: gfortran12 - found ===> Generating temporary packing list gmake[1]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3' Making install in src gmake[2]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src' Making install in include gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/include' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/include' gmake[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/include' install -m 0644 pnetcdf.h '/construction/science/pnetcdf/stage/usr/local/include' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/include' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/include' Making install in dispatchers gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/dispatchers' gmake install-am gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/dispatchers' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/dispatchers' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/dispatchers' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/dispatchers' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/dispatchers' Making install in drivers gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers' Making install in include gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/include' gmake install-am gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/include' gmake[6]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/include' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/include' gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/include' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/include' Making install in common gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/common' gmake install-am gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/common' gmake[6]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/common' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/common' gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/common' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/common' Making install in ncmpio gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/ncmpio' gmake install-am gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/ncmpio' gmake[6]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/ncmpio' gmake[6]: Nothing to be done for 'install-exec-am'. gmake[6]: Nothing to be done for 'install-data-am'. gmake[6]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/ncmpio' gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/ncmpio' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers/ncmpio' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/drivers' Making install in binding gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding' Making install in cxx gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/cxx' gmake install-am gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/cxx' gmake[6]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/cxx' gmake[6]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/include' install -m 0644 pnetcdf '/construction/science/pnetcdf/stage/usr/local/include' gmake[6]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/cxx' gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/cxx' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/cxx' Making install in f77 gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f77' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f77' gmake[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/include' install -m 0644 pnetcdf.inc '/construction/science/pnetcdf/stage/usr/local/include' gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f77' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f77' Making install in f90 gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f90' gmake install-am gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f90' gmake[6]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f90' gmake[6]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/include' install -m 0644 pnetcdf.mod '/construction/science/pnetcdf/stage/usr/local/include' gmake[6]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f90' gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f90' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding/f90' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/binding' Making install in packaging gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/packaging' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/packaging' gmake[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/libdata/pkgconfig' install -m 0644 pnetcdf.pc '/construction/science/pnetcdf/stage/usr/local/libdata/pkgconfig' gmake install-data-hook gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/packaging' /usr/bin/sed -i '' -e 's|INSTALL_PREFIX|/usr/local|g ; s|INSTALL_EXEC_PREFIX|/usr/local|g' /construction/science/pnetcdf/stage/usr/local/libdata/pkgconfig/pnetcdf.pc gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/packaging' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/packaging' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/packaging' Making install in . gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src' Making install in libs gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/libs' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/libs' /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/lib' /bin/sh ../../libtool --mode=install /usr/bin/install -c libpnetcdf.la '/construction/science/pnetcdf/stage/usr/local/lib' libtool: install: /usr/bin/install -c .libs/libpnetcdf.lai /construction/science/pnetcdf/stage/usr/local/lib/libpnetcdf.la libtool: install: /usr/bin/install -c .libs/libpnetcdf.a /construction/science/pnetcdf/stage/usr/local/lib/libpnetcdf.a libtool: install: chmod 644 /construction/science/pnetcdf/stage/usr/local/lib/libpnetcdf.a libtool: install: /usr/local/bin/ranlib /construction/science/pnetcdf/stage/usr/local/lib/libpnetcdf.a libtool: warning: remember to run 'libtool --finish /usr/local/lib' gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/libs' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/libs' Making install in utils gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils' Making install in ncmpigen gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpigen' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpigen' /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/bin' /bin/sh ../../../libtool --mode=install install -s -m 555 ncmpigen '/construction/science/pnetcdf/stage/usr/local/bin' libtool: install: install -m 555 -s ncmpigen /construction/science/pnetcdf/stage/usr/local/bin/ncmpigen /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/man/man1' install -m 0644 ncmpigen.1 '/construction/science/pnetcdf/stage/usr/local/man/man1' gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpigen' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpigen' Making install in ncmpidump gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpidump' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpidump' /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/bin' /bin/sh ../../../libtool --mode=install install -s -m 555 ncmpidump '/construction/science/pnetcdf/stage/usr/local/bin' libtool: install: install -m 555 -s ncmpidump /construction/science/pnetcdf/stage/usr/local/bin/ncmpidump /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/man/man1' install -m 0644 ncmpidump.1 '/construction/science/pnetcdf/stage/usr/local/man/man1' gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpidump' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpidump' Making install in ncmpidiff gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpidiff' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpidiff' /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/bin' /bin/sh ../../../libtool --mode=install install -s -m 555 ncmpidiff cdfdiff '/construction/science/pnetcdf/stage/usr/local/bin' libtool: install: install -m 555 -s ncmpidiff /construction/science/pnetcdf/stage/usr/local/bin/ncmpidiff libtool: install: install -m 555 -s cdfdiff /construction/science/pnetcdf/stage/usr/local/bin/cdfdiff /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/man/man1' install -m 0644 ncmpidiff.1 cdfdiff.1 '/construction/science/pnetcdf/stage/usr/local/man/man1' gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpidiff' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncmpidiff' Making install in ncvalidator gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncvalidator' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncvalidator' /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/bin' /bin/sh ../../../libtool --mode=install install -s -m 555 ncvalidator '/construction/science/pnetcdf/stage/usr/local/bin' libtool: install: install -m 555 -s ncvalidator /construction/science/pnetcdf/stage/usr/local/bin/ncvalidator /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/man/man1' install -m 0644 ncvalidator.1 '/construction/science/pnetcdf/stage/usr/local/man/man1' gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncvalidator' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncvalidator' Making install in pnetcdf_version gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/pnetcdf_version' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/pnetcdf_version' /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/bin' /bin/sh ../../../libtool --mode=install install -s -m 555 pnetcdf_version '/construction/science/pnetcdf/stage/usr/local/bin' libtool: install: install -m 555 -s pnetcdf_version /construction/science/pnetcdf/stage/usr/local/bin/pnetcdf_version /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/man/man1' install -m 0644 pnetcdf_version.1 '/construction/science/pnetcdf/stage/usr/local/man/man1' gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/pnetcdf_version' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/pnetcdf_version' Making install in ncoffsets gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncoffsets' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncoffsets' /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/bin' /bin/sh ../../../libtool --mode=install install -s -m 555 ncoffsets '/construction/science/pnetcdf/stage/usr/local/bin' libtool: install: install -m 555 -s ncoffsets /construction/science/pnetcdf/stage/usr/local/bin/ncoffsets /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/man/man1' install -m 0644 ncoffsets.1 '/construction/science/pnetcdf/stage/usr/local/man/man1' gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncoffsets' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils/ncoffsets' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils' /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/bin' install -m 555 pnetcdf-config '/construction/science/pnetcdf/stage/usr/local/bin' gmake install-exec-hook gmake[6]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils' /usr/bin/sed -i '' -e 's|INSTALL_PREFIX|/usr/local|g ; s|INSTALL_EXEC_PREFIX|/usr/local|g' /construction/science/pnetcdf/stage/usr/local/bin/pnetcdf-config chmod +x /construction/science/pnetcdf/stage/usr/local/bin/pnetcdf-config gmake[6]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils' gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src/utils' gmake[2]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/src' Making install in man gmake[2]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/man' gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/man' gmake[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/construction/science/pnetcdf/stage/usr/local/man/man3' install -m 0644 pnetcdf.3 pnetcdf_f77.3 pnetcdf_f90.3 '/construction/science/pnetcdf/stage/usr/local/man/man3' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/man' gmake[2]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/man' Making install in examples gmake[2]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples' Making install in C gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/C' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/C' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/C' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/C' Making install in CXX gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/CXX' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/CXX' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/CXX' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/CXX' Making install in F77 gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/F77' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/F77' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/F77' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/F77' Making install in F90 gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/F90' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/F90' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/F90' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/F90' Making install in tutorial gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/tutorial' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/tutorial' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/tutorial' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples/tutorial' gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples' gmake[2]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/examples' Making install in benchmarks gmake[2]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks' Making install in C gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks/C' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks/C' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks/C' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks/C' Making install in FLASH-IO gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks/FLASH-IO' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks/FLASH-IO' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks/FLASH-IO' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks/FLASH-IO' gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks' gmake[2]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/benchmarks' Making install in test gmake[2]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test' Making install in common gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/common' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/common' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/common' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/common' Making install in C gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/C' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/C' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/C' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/C' Making install in fandc gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/fandc' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/fandc' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/fandc' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/fandc' Making install in nc_test gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nc_test' gmake install-am gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nc_test' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nc_test' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nc_test' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nc_test' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nc_test' Making install in cdf_format gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/cdf_format' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/cdf_format' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/cdf_format' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/cdf_format' Making install in header gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/header' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/header' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/header' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/header' Making install in testcases gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/testcases' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/testcases' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/testcases' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/testcases' Making install in nonblocking gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nonblocking' gmake install-am gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nonblocking' gmake[5]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nonblocking' gmake[5]: Nothing to be done for 'install-exec-am'. gmake[5]: Nothing to be done for 'install-data-am'. gmake[5]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nonblocking' gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nonblocking' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nonblocking' Making install in CXX gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/CXX' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/CXX' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/CXX' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/CXX' Making install in nf_test gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nf_test' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nf_test' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nf_test' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nf_test' Making install in nf90_test gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nf90_test' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nf90_test' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nf90_test' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/nf90_test' Making install in F90 gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/F90' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/F90' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/F90' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test/F90' gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test' gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test' gmake[4]: Nothing to be done for 'install-exec-am'. gmake[4]: Nothing to be done for 'install-data-am'. gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test' gmake[2]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3/test' gmake[2]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3' gmake[3]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3' gmake[3]: Nothing to be done for 'install-exec-am'. gmake install-data-hook gmake[4]: Entering directory '/construction/science/pnetcdf/pnetcdf-1.12.3' +----------------------------------------------------------------------------+ | | PnetCDF has been successfully installed under | /construction/science/pnetcdf/stage/usr/local | | * PnetCDF header files have been installed in | /construction/science/pnetcdf/stage/usr/local/include | * PnetCDF library files have been installed in | /construction/science/pnetcdf/stage/usr/local/lib | * PnetCDF utility programs have been installed in | /construction/science/pnetcdf/stage/usr/local/bin | * PnetCDF man pages have been installed in | /construction/science/pnetcdf/stage/usr/local/share/man | | To compile your PnetCDF programs, please add the following to the command | line, so the compiler can find the PnetCDF header files: | -I/construction/science/pnetcdf/stage/usr/local/include | | Add the following line to link your program to PnetCDF library: | -L/construction/science/pnetcdf/stage/usr/local/lib -lpnetcdf | | | PnetCDF is jointly developed by a team at Northwestern University and | Argonne National Laboratory. | | Visit PnetCDF project web site for more information | https://parallel-netcdf.github.io | +----------------------------------------------------------------------------+ gmake[4]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3' gmake[3]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3' gmake[2]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3' gmake[1]: Leaving directory '/construction/science/pnetcdf/pnetcdf-1.12.3' ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:04 ------------------------------------------------------------------------------- -- Phase: check-plist ------------------------------------------------------------------------------- ====> Checking for pkg-plist issues (check-plist) ===> Parsing plist ===> Checking for items in STAGEDIR missing from pkg-plist ===> Checking for items in pkg-plist which are not in STAGEDIR ===> No pkg-plist issues found (check-plist) SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for pnetcdf-1.12.3_1 file sizes/checksums [24]: 0% file sizes/checksums [24]: 100% Service unavailablepacking files [24]: 0% packing files [24]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:01 TOTAL TIME 00:03:42