------------------------------------------------------------------------------- -- Phase: Environment ------------------------------------------------------------------------------- NO_DEPENDS=1 UNAME_r=6.5 UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=unknown UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 LANG=C HOME=/root USER=root TERM=dumb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: showconfig ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ENV ------------------------------------------------------------------------------- PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/construction/math/py-dionysus XDG_CONFIG_HOME=/construction/math/py-dionysus XDG_CACHE_HOME=/construction/math/py-dionysus/.cache HOME=/construction/math/py-dionysus TMPDIR="/tmp" PATH=/construction/math/py-dionysus/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/math/py-dionysus/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ARGS ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ENV ------------------------------------------------------------------------------- XDG_DATA_HOME=/construction/math/py-dionysus XDG_CONFIG_HOME=/construction/math/py-dionysus XDG_CACHE_HOME=/construction/math/py-dionysus/.cache HOME=/construction/math/py-dionysus TMPDIR="/tmp" PATH=/construction/math/py-dionysus/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/math/py-dionysus/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ARGS ------------------------------------------------------------------------------- DESTDIR=/construction/math/py-dionysus/stage SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: PLIST_SUB ------------------------------------------------------------------------------- CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=dragonfly6 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=6.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/dionysus" EXAMPLESDIR="share/examples/dionysus" DATADIR="share/dionysus" WWWDIR="www/dionysus" ETCDIR="etc/dionysus" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: SUB_LIST ------------------------------------------------------------------------------- PYTHON_INCLUDEDIR=/usr/local/include/python3.9 PYTHON_LIBDIR=/usr/local/lib/python3.9 PYTHON_PLATFORM=dragonfly6 PYTHON_SITELIBDIR=/usr/local/lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/dionysus DOCSDIR=/usr/local/share/doc/dionysus EXAMPLESDIR=/usr/local/share/examples/dionysus WWWDIR=/usr/local/www/dionysus ETCDIR=/usr/local/etc/dionysus SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: /etc/make.conf ------------------------------------------------------------------------------- DPORTS_BUILDER=yes DISABLE_LICENSES=yes DEFAULT_VERSIONS=ssl=openssl FORCE_PACKAGE=yes DEVELOPER=yes DFLY_STING_XFAIL=yes USE_PACKAGE_DEPENDS_ONLY=yes PORTSDIR=/xports PORT_DBDIR=/options PKG_DBDIR=/var/db/pkg PKG_CACHEDIR=/var/cache/pkg PKG_COMPRESSION_FORMAT=.tgz DEVELOPER=1 WITH_CCACHE_BUILD=yes CCACHE_DIR=/ccache UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=600503 OSVERSION=9999999 OSREL=6.5 _OSRELEASE=6.5-SYNTH DISTDIR=/distfiles WRKDIRPREFIX=/construction BATCH=yes PACKAGE_BUILDING=yes PKG_CREATE_VERBOSE=yes MAKE_JOBS_NUMBER=13 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/icu-73.2,1.pkg Installing /packages/All/boost-libs-1.82.0_1.pkg ===== Message from boost-libs-1.82.0_1: -- You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. Installing /packages/All/expat-2.5.0.pkg Installing /packages/All/libuv-1.46.0.pkg Installing /packages/All/indexinfo-0.3.1.pkg Installing /packages/All/gettext-runtime-0.21.1.pkg Installing /packages/All/openssl-1.1.1u,1.pkg Installing /packages/All/rhash-1.4.3.pkg Installing /packages/All/pkg-1.19.2.pkg Installing /packages/All/liblz4-1.9.4,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/zstd-1.5.5.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libarchive-3.6.2,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/ncurses-6.4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===== Message from ncurses-6.4: -- To get the terminfo database please install the terminfo-db package: pkg install terminfo-db Installing /packages/All/cmake-core-3.26.1_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libffi-3.4.4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/mpdecimal-2.5.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/readline-8.2.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/python39-3.9.17.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===== Message from python39-3.9.17: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py39-gdbm databases/py-gdbm@py39 py39-sqlite3 databases/py-sqlite3@py39 py39-tkinter x11-toolkits/py-tkinter@py39 Installing /packages/All/ccache-3.7.12_4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc create symlink for gcc (world) create symlink for g++ create symlink for g++ (world) ===== Message from ccache-3.7.12_4: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. SUCCEEDED 00:00:12 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> py39-dionysus-topology-library-g20210521_1 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> py39-dionysus-topology-library-g20210521_1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-dionysus-topology-library-g20210521_1 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> py39-dionysus-topology-library-g20210521_1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-dionysus-topology-library-g20210521_1 for building => SHA256 Checksum OK for mrzv-dionysus-g20210521-ae27bb1_GH0.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> py39-dionysus-topology-library-g20210521_1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-dionysus-topology-library-g20210521_1 for building ===> Extracting for py39-dionysus-topology-library-g20210521_1 => SHA256 Checksum OK for mrzv-dionysus-g20210521-ae27bb1_GH0.tar.gz. Extracted Memory Use: 5.09M SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for py39-dionysus-topology-library-g20210521_1 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> py39-dionysus-topology-library-g20210521_1 depends on file: /usr/local/include/boost/range/adaptors.hpp - found ===> py39-dionysus-topology-library-g20210521_1 depends on file: /usr/local/bin/cmake - found ===> py39-dionysus-topology-library-g20210521_1 depends on file: /usr/local/bin/python3.9 - found ===> py39-dionysus-topology-library-g20210521_1 depends on file: /usr/local/bin/ccache - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> py39-dionysus-topology-library-g20210521_1 depends on file: /usr/local/include/boost/range/adaptors.hpp - found ===> py39-dionysus-topology-library-g20210521_1 depends on file: /usr/local/bin/cmake - found ===> py39-dionysus-topology-library-g20210521_1 depends on file: /usr/local/bin/python3.9 - found ===> py39-dionysus-topology-library-g20210521_1 depends on file: /usr/local/bin/ccache - found ===> Configuring for py39-dionysus-topology-library-g20210521_1 ===> Performing out-of-source build /bin/mkdir -p /construction/math/py-dionysus/.build CMake Warning (dev) at CMakeLists.txt:1 (project): cmake_minimum_required() should be called prior to this top-level project() call. Please see the cmake-commands(7) manual for usage documentation of both commands. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 8.3.0 -- The CXX compiler identification is GNU 8.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/libexec/ccache/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/libexec/ccache/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Boost: /usr/local/include (found version "1.82.0") -- pybind11 v2.6.2 dev1 -- Found PythonInterp: /usr/local/bin/python3.9 (found version "3.9.17") -- Found PythonLibs: /usr/local/lib/libpython3.9.so -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Configuring done (1.1s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: BOOST_PYTHON_SUFFIX CMAKE_C_FLAGS_DEBUG CMAKE_C_FLAGS_RELEASE CMAKE_NO_BUILTIN_CHRPATH CMAKE_SHARED_LINKER_FLAGS FETCHCONTENT_FULLY_DISCONNECTED Python_EXECUTABLE THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /construction/math/py-dionysus/.build SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for py39-dionysus-topology-library-g20210521_1 /usr/local/bin/cmake -S/construction/math/py-dionysus/dionysus-ae27bb1 -B/construction/math/py-dionysus/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/math/py-dionysus/.build/CMakeFiles /construction/math/py-dionysus/.build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all --- bindings/python/CMakeFiles/dionysus.dir/all --- --- bindings/python/CMakeFiles/_dionysus.dir/all --- --- bindings/python/CMakeFiles/dionysus.dir/all --- /usr/bin/make -f bindings/python/CMakeFiles/dionysus.dir/build.make bindings/python/CMakeFiles/dionysus.dir/depend --- bindings/python/CMakeFiles/_dionysus.dir/all --- /usr/bin/make -f bindings/python/CMakeFiles/_dionysus.dir/build.make bindings/python/CMakeFiles/_dionysus.dir/depend --- bindings/python/CMakeFiles/dionysus.dir/all --- --- bindings/python/CMakeFiles/dionysus.dir/depend --- cd /construction/math/py-dionysus/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/math/py-dionysus/dionysus-ae27bb1 /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python /construction/math/py-dionysus/.build /construction/math/py-dionysus/.build/bindings/python /construction/math/py-dionysus/.build/bindings/python/CMakeFiles/dionysus.dir/DependInfo.cmake --- bindings/python/CMakeFiles/_dionysus.dir/all --- --- bindings/python/CMakeFiles/_dionysus.dir/depend --- cd /construction/math/py-dionysus/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/math/py-dionysus/dionysus-ae27bb1 /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python /construction/math/py-dionysus/.build /construction/math/py-dionysus/.build/bindings/python /construction/math/py-dionysus/.build/bindings/python/CMakeFiles/_dionysus.dir/DependInfo.cmake --- bindings/python/CMakeFiles/dionysus.dir/all --- /usr/bin/make -f bindings/python/CMakeFiles/dionysus.dir/build.make bindings/python/CMakeFiles/dionysus.dir/build --- bindings/python/CMakeFiles/dionysus --- cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/bin/cmake -E copy_directory /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/dionysus /construction/math/py-dionysus/.build/bindings/python/dionysus --- bindings/python/CMakeFiles/_dionysus.dir/all --- /usr/bin/make -f bindings/python/CMakeFiles/_dionysus.dir/build.make bindings/python/CMakeFiles/_dionysus.dir/build --- bindings/python/CMakeFiles/dionysus.dir/all --- [ 14%] Built target dionysus --- bindings/python/CMakeFiles/_dionysus.dir/all --- --- bindings/python/CMakeFiles/_dionysus.dir/dionysus.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/filtration.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/simplex.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/field.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/rips.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/freudenthal.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/persistence.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/diagram.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/omni-field-persistence.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/cohomology-persistence.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/zigzag-persistence.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/bottleneck-distance.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/wasserstein-distance.cpp.o --- --- bindings/python/CMakeFiles/_dionysus.dir/dionysus.cpp.o --- [ 14%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/dionysus.cpp.o cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/dionysus.cpp.o -MF CMakeFiles/_dionysus.dir/dionysus.cpp.o.d -o CMakeFiles/_dionysus.dir/dionysus.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/dionysus.cpp --- bindings/python/CMakeFiles/_dionysus.dir/filtration.cpp.o --- [ 21%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/filtration.cpp.o cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/filtration.cpp.o -MF CMakeFiles/_dionysus.dir/filtration.cpp.o.d -o CMakeFiles/_dionysus.dir/filtration.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/filtration.cpp --- bindings/python/CMakeFiles/_dionysus.dir/simplex.cpp.o --- [ 42%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/simplex.cpp.o cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/simplex.cpp.o -MF CMakeFiles/_dionysus.dir/simplex.cpp.o.d -o CMakeFiles/_dionysus.dir/simplex.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.cpp --- bindings/python/CMakeFiles/_dionysus.dir/field.cpp.o --- [ 14%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/field.cpp.o cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/field.cpp.o -MF CMakeFiles/_dionysus.dir/field.cpp.o.d -o CMakeFiles/_dionysus.dir/field.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/field.cpp --- bindings/python/CMakeFiles/_dionysus.dir/rips.cpp.o --- [ 57%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/rips.cpp.o cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/rips.cpp.o -MF CMakeFiles/_dionysus.dir/rips.cpp.o.d -o CMakeFiles/_dionysus.dir/rips.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/rips.cpp --- bindings/python/CMakeFiles/_dionysus.dir/persistence.cpp.o --- [ 28%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/persistence.cpp.o cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/persistence.cpp.o -MF CMakeFiles/_dionysus.dir/persistence.cpp.o.d -o CMakeFiles/_dionysus.dir/persistence.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/persistence.cpp --- bindings/python/CMakeFiles/_dionysus.dir/diagram.cpp.o --- [ 50%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/diagram.cpp.o cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/diagram.cpp.o -MF CMakeFiles/_dionysus.dir/diagram.cpp.o.d -o CMakeFiles/_dionysus.dir/diagram.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.cpp --- bindings/python/CMakeFiles/_dionysus.dir/cohomology-persistence.cpp.o --- [ 64%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/cohomology-persistence.cpp.o cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/cohomology-persistence.cpp.o -MF CMakeFiles/_dionysus.dir/cohomology-persistence.cpp.o.d -o CMakeFiles/_dionysus.dir/cohomology-persistence.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/cohomology-persistence.cpp --- bindings/python/CMakeFiles/_dionysus.dir/zigzag-persistence.cpp.o --- [ 35%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/zigzag-persistence.cpp.o cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/zigzag-persistence.cpp.o -MF CMakeFiles/_dionysus.dir/zigzag-persistence.cpp.o.d -o CMakeFiles/_dionysus.dir/zigzag-persistence.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/zigzag-persistence.cpp --- bindings/python/CMakeFiles/_dionysus.dir/wasserstein-distance.cpp.o --- [ 71%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/wasserstein-distance.cpp.o cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/wasserstein-distance.cpp.o -MF CMakeFiles/_dionysus.dir/wasserstein-distance.cpp.o.d -o CMakeFiles/_dionysus.dir/wasserstein-distance.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/wasserstein-distance.cpp --- bindings/python/CMakeFiles/_dionysus.dir/freudenthal.cpp.o --- [ 78%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/freudenthal.cpp.o --- bindings/python/CMakeFiles/_dionysus.dir/omni-field-persistence.cpp.o --- [ 85%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/omni-field-persistence.cpp.o --- bindings/python/CMakeFiles/_dionysus.dir/freudenthal.cpp.o --- cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/freudenthal.cpp.o -MF CMakeFiles/_dionysus.dir/freudenthal.cpp.o.d -o CMakeFiles/_dionysus.dir/freudenthal.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/freudenthal.cpp --- bindings/python/CMakeFiles/_dionysus.dir/bottleneck-distance.cpp.o --- [ 92%] Building CXX object bindings/python/CMakeFiles/_dionysus.dir/bottleneck-distance.cpp.o cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/bottleneck-distance.cpp.o -MF CMakeFiles/_dionysus.dir/bottleneck-distance.cpp.o.d -o CMakeFiles/_dionysus.dir/bottleneck-distance.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/bottleneck-distance.cpp --- bindings/python/CMakeFiles/_dionysus.dir/omni-field-persistence.cpp.o --- cd /construction/math/py-dionysus/.build/bindings/python && /usr/local/libexec/ccache/c++ -D_dionysus_EXPORTS -I/construction/math/py-dionysus/.build -I/construction/math/py-dionysus/dionysus-ae27bb1 -I/construction/math/py-dionysus/dionysus-ae27bb1/include -I/construction/math/py-dionysus/dionysus-ae27bb1/ext/hera/wasserstein/include -isystem/usr/local/include -isystem/usr/local/include/python3.9 -isystem/construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/pybind11/include -pipe -O2 -fno-strict-aliasing -pipe -O2 -fno-strict-aliasing -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT bindings/python/CMakeFiles/_dionysus.dir/omni-field-persistence.cpp.o -MF CMakeFiles/_dionysus.dir/omni-field-persistence.cpp.o.d -o CMakeFiles/_dionysus.dir/omni-field-persistence.cpp.o -c /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/omni-field-persistence.cpp --- bindings/python/CMakeFiles/_dionysus.dir/simplex.cpp.o --- In file included from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.cpp:8: /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h: In member function 'dionysus::Simplex::BoundaryIterator::Value dionysus::Simplex::BoundaryIterator::dereference() const': /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:171:24: error: 'std::placeholders' has not been declared using std::placeholders::_1; ^~~~~~~~~~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:66: error: 'bind' is not a member of 'std' boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), bg_, end_), ^~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:66: note: 'std::bind' is defined in header ''; did you forget to '#include '? /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:12:1: +#include /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:66: boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), bg_, end_), ^~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:89: error: '_1' was not declared in this scope boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), bg_, end_), ^~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:89: note: suggested alternatives: In file included from /usr/local/include/boost/mpl/aux_/include_preprocessed.hpp:37, from /usr/local/include/boost/mpl/placeholders.hpp:43, from /usr/local/include/boost/iterator/iterator_categories.hpp:16, from /usr/local/include/boost/iterator/iterator_facade.hpp:13, from /usr/local/include/boost/range/iterator_range_core.hpp:27, from /usr/local/include/boost/range/iterator_range.hpp:13, from /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:7, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.cpp:8: /usr/local/include/boost/mpl/aux_/preprocessed/gcc/placeholders.hpp:29:16: note: 'mpl_::_1' typedef arg<1> _1; ^~ /usr/local/include/boost/mpl/aux_/preprocessed/gcc/placeholders.hpp:29:16: note: 'mpl_::_1' In file included from /usr/local/include/boost/describe/members.hpp:20, from /usr/local/include/boost/container_hash/is_described_class.hpp:11, from /usr/local/include/boost/container_hash/hash.hpp:18, from /usr/local/include/boost/functional/hash.hpp:6, from /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:8, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.cpp:8: /usr/local/include/boost/mp11/bind.hpp:45:21: note: 'boost::mp11::_1' using _1 = mp_arg<0>; ^ In file included from /usr/local/include/boost/mpl/aux_/include_preprocessed.hpp:37, from /usr/local/include/boost/mpl/placeholders.hpp:43, from /usr/local/include/boost/iterator/iterator_categories.hpp:16, from /usr/local/include/boost/iterator/iterator_facade.hpp:13, from /usr/local/include/boost/range/iterator_range_core.hpp:27, from /usr/local/include/boost/range/iterator_range.hpp:13, from /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:7, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.cpp:8: /usr/local/include/boost/mpl/aux_/preprocessed/gcc/placeholders.hpp:29:16: note: 'mpl_::_1' typedef arg<1> _1; ^~ In file included from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.cpp:8: /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:174:66: error: 'bind' is not a member of 'std' boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), end_, end_)); ^~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:174:66: note: 'std::bind' is defined in header ''; did you forget to '#include '? *** [bindings/python/CMakeFiles/_dionysus.dir/simplex.cpp.o] Error code 1 make[3]: stopped in /construction/math/py-dionysus/.build --- bindings/python/CMakeFiles/_dionysus.dir/diagram.cpp.o --- In file included from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.cpp:13: /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h: In member function 'dionysus::Simplex::BoundaryIterator::Value dionysus::Simplex::BoundaryIterator::dereference() const': /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:171:24: error: 'std::placeholders' has not been declared using std::placeholders::_1; ^~~~~~~~~~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:66: error: 'bind' is not a member of 'std' boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), bg_, end_), ^~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:66: note: 'std::bind' is defined in header ''; did you forget to '#include '? /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:12:1: +#include /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:66: boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), bg_, end_), ^~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:89: error: '_1' was not declared in this scope boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), bg_, end_), ^~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:89: note: suggested alternatives: In file included from /usr/local/include/boost/mpl/aux_/include_preprocessed.hpp:37, from /usr/local/include/boost/mpl/placeholders.hpp:43, from /usr/local/include/boost/iterator/iterator_categories.hpp:16, from /usr/local/include/boost/iterator/iterator_facade.hpp:13, from /usr/local/include/boost/range/iterator_range_core.hpp:27, from /usr/local/include/boost/range/iterator_range.hpp:13, from /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:7, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.cpp:13: /usr/local/include/boost/mpl/aux_/preprocessed/gcc/placeholders.hpp:29:16: note: 'mpl_::_1' typedef arg<1> _1; ^~ /usr/local/include/boost/mpl/aux_/preprocessed/gcc/placeholders.hpp:29:16: note: 'mpl_::_1' In file included from /usr/local/include/boost/describe/members.hpp:20, from /usr/local/include/boost/container_hash/is_described_class.hpp:11, from /usr/local/include/boost/container_hash/hash.hpp:18, from /usr/local/include/boost/functional/hash.hpp:6, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.cpp:6: /usr/local/include/boost/mp11/bind.hpp:45:21: note: 'boost::mp11::_1' using _1 = mp_arg<0>; ^ In file included from /usr/local/include/boost/mpl/aux_/include_preprocessed.hpp:37, from /usr/local/include/boost/mpl/placeholders.hpp:43, from /usr/local/include/boost/iterator/iterator_categories.hpp:16, from /usr/local/include/boost/iterator/iterator_facade.hpp:13, from /usr/local/include/boost/range/iterator_range_core.hpp:27, from /usr/local/include/boost/range/iterator_range.hpp:13, from /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:7, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.cpp:13: /usr/local/include/boost/mpl/aux_/preprocessed/gcc/placeholders.hpp:29:16: note: 'mpl_::_1' typedef arg<1> _1; ^~ In file included from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.cpp:13: /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:174:66: error: 'bind' is not a member of 'std' boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), end_, end_)); ^~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:174:66: note: 'std::bind' is defined in header ''; did you forget to '#include '? *** [bindings/python/CMakeFiles/_dionysus.dir/diagram.cpp.o] Error code 1 make[3]: stopped in /construction/math/py-dionysus/.build --- bindings/python/CMakeFiles/_dionysus.dir/wasserstein-distance.cpp.o --- In file included from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/wasserstein-distance.cpp:4: /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h: In member function 'dionysus::Simplex::BoundaryIterator::Value dionysus::Simplex::BoundaryIterator::dereference() const': /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:171:24: error: 'std::placeholders' has not been declared using std::placeholders::_1; ^~~~~~~~~~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:66: error: 'bind' is not a member of 'std' boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), bg_, end_), ^~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:66: note: 'std::bind' is defined in header ''; did you forget to '#include '? /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:12:1: +#include /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:66: boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), bg_, end_), ^~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:89: error: '_1' was not declared in this scope boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), bg_, end_), ^~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:89: note: suggested alternatives: In file included from /usr/local/include/boost/mpl/aux_/include_preprocessed.hpp:37, from /usr/local/include/boost/mpl/placeholders.hpp:43, from /usr/local/include/boost/iterator/iterator_categories.hpp:16, from /usr/local/include/boost/iterator/iterator_facade.hpp:13, from /usr/local/include/boost/range/iterator_range_core.hpp:27, from /usr/local/include/boost/range/iterator_range.hpp:13, from /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:7, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/wasserstein-distance.cpp:4: /usr/local/include/boost/mpl/aux_/preprocessed/gcc/placeholders.hpp:29:16: note: 'mpl_::_1' typedef arg<1> _1; ^~ /usr/local/include/boost/mpl/aux_/preprocessed/gcc/placeholders.hpp:29:16: note: 'mpl_::_1' In file included from /usr/local/include/boost/describe/members.hpp:20, from /usr/local/include/boost/container_hash/is_described_class.hpp:11, from /usr/local/include/boost/container_hash/hash.hpp:18, from /usr/local/include/boost/functional/hash.hpp:6, from /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:8, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/wasserstein-distance.cpp:4: /usr/local/include/boost/mp11/bind.hpp:45:21: note: 'boost::mp11::_1' using _1 = mp_arg<0>; ^ In file included from /usr/local/include/boost/mpl/aux_/include_preprocessed.hpp:37, from /usr/local/include/boost/mpl/placeholders.hpp:43, from /usr/local/include/boost/iterator/iterator_categories.hpp:16, from /usr/local/include/boost/iterator/iterator_facade.hpp:13, from /usr/local/include/boost/range/iterator_range_core.hpp:27, from /usr/local/include/boost/range/iterator_range.hpp:13, from /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:7, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/wasserstein-distance.cpp:4: /usr/local/include/boost/mpl/aux_/preprocessed/gcc/placeholders.hpp:29:16: note: 'mpl_::_1' typedef arg<1> _1; ^~ In file included from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/wasserstein-distance.cpp:4: /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:174:66: error: 'bind' is not a member of 'std' boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), end_, end_)); ^~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:174:66: note: 'std::bind' is defined in header ''; did you forget to '#include '? In file included from /construction/math/py-dionysus/dionysus-ae27bb1/include/../ext/hera/wasserstein/include/dnn/geometry/../parallel/tbb.h:7, from /construction/math/py-dionysus/dionysus-ae27bb1/include/../ext/hera/wasserstein/include/dnn/geometry/euclidean-fixed.h:16, from /construction/math/py-dionysus/dionysus-ae27bb1/include/../ext/hera/wasserstein/include/auction_oracle_kdtree_restricted.h:43, from /construction/math/py-dionysus/dionysus-ae27bb1/include/../ext/hera/wasserstein/include/auction_oracle.h:36, from /construction/math/py-dionysus/dionysus-ae27bb1/include/../ext/hera/wasserstein/include/auction_runner_gs.h:35, from /construction/math/py-dionysus/dionysus-ae27bb1/include/../ext/hera/wasserstein/include/wasserstein.h:39, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/wasserstein-distance.cpp:6: /usr/local/include/boost/bind.hpp: At global scope: /usr/local/include/boost/bind.hpp:41:1: note: #pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior. ) ^ *** [bindings/python/CMakeFiles/_dionysus.dir/wasserstein-distance.cpp.o] Error code 1 make[3]: stopped in /construction/math/py-dionysus/.build --- bindings/python/CMakeFiles/_dionysus.dir/bottleneck-distance.cpp.o --- In file included from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/bottleneck-distance.cpp:4: /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h: In member function 'dionysus::Simplex::BoundaryIterator::Value dionysus::Simplex::BoundaryIterator::dereference() const': /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:171:24: error: 'std::placeholders' has not been declared using std::placeholders::_1; ^~~~~~~~~~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:66: error: 'bind' is not a member of 'std' boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), bg_, end_), ^~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:66: note: 'std::bind' is defined in header ''; did you forget to '#include '? /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:12:1: +#include /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:66: boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), bg_, end_), ^~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:89: error: '_1' was not declared in this scope boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), bg_, end_), ^~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:173:89: note: suggested alternatives: In file included from /usr/local/include/boost/mpl/aux_/include_preprocessed.hpp:37, from /usr/local/include/boost/mpl/placeholders.hpp:43, from /usr/local/include/boost/iterator/iterator_categories.hpp:16, from /usr/local/include/boost/iterator/iterator_facade.hpp:13, from /usr/local/include/boost/range/iterator_range_core.hpp:27, from /usr/local/include/boost/range/iterator_range.hpp:13, from /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:7, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/bottleneck-distance.cpp:4: /usr/local/include/boost/mpl/aux_/preprocessed/gcc/placeholders.hpp:29:16: note: 'mpl_::_1' typedef arg<1> _1; ^~ /usr/local/include/boost/mpl/aux_/preprocessed/gcc/placeholders.hpp:29:16: note: 'mpl_::_1' In file included from /usr/local/include/boost/describe/members.hpp:20, from /usr/local/include/boost/container_hash/is_described_class.hpp:11, from /usr/local/include/boost/container_hash/hash.hpp:18, from /usr/local/include/boost/functional/hash.hpp:6, from /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:8, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/bottleneck-distance.cpp:4: /usr/local/include/boost/mp11/bind.hpp:45:21: note: 'boost::mp11::_1' using _1 = mp_arg<0>; ^ In file included from /usr/local/include/boost/mpl/aux_/include_preprocessed.hpp:37, from /usr/local/include/boost/mpl/placeholders.hpp:43, from /usr/local/include/boost/iterator/iterator_categories.hpp:16, from /usr/local/include/boost/iterator/iterator_facade.hpp:13, from /usr/local/include/boost/range/iterator_range_core.hpp:27, from /usr/local/include/boost/range/iterator_range.hpp:13, from /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:7, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/bottleneck-distance.cpp:4: /usr/local/include/boost/mpl/aux_/preprocessed/gcc/placeholders.hpp:29:16: note: 'mpl_::_1' typedef arg<1> _1; ^~ In file included from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/simplex.h:3, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/diagram.h:5, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/bottleneck-distance.cpp:4: /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:174:66: error: 'bind' is not a member of 'std' boost::make_filter_iterator(std::bind(NotEqualVertex(), _1, *(this->base())), end_, end_)); ^~~~ /construction/math/py-dionysus/dionysus-ae27bb1/include/dionysus/simplex.h:174:66: note: 'std::bind' is defined in header ''; did you forget to '#include '? In file included from /construction/math/py-dionysus/dionysus-ae27bb1/include/../ext/hera/bottleneck/include/dnn/geometry/../parallel/tbb.h:11, from /construction/math/py-dionysus/dionysus-ae27bb1/include/../ext/hera/bottleneck/include/dnn/geometry/euclidean-fixed.h:15, from /construction/math/py-dionysus/dionysus-ae27bb1/include/../ext/hera/bottleneck/include/neighb_oracle.h:37, from /construction/math/py-dionysus/dionysus-ae27bb1/include/../ext/hera/bottleneck/include/bound_match.h:36, from /construction/math/py-dionysus/dionysus-ae27bb1/include/../ext/hera/bottleneck/include/bottleneck_detail.h:41, from /construction/math/py-dionysus/dionysus-ae27bb1/include/../ext/hera/bottleneck/include/bottleneck.h:41, from /construction/math/py-dionysus/dionysus-ae27bb1/bindings/python/bottleneck-distance.cpp:6: /usr/local/include/boost/bind.hpp: At global scope: /usr/local/include/boost/bind.hpp:41:1: note: #pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior. ) ^ *** [bindings/python/CMakeFiles/_dionysus.dir/bottleneck-distance.cpp.o] Error code 1 make[3]: stopped in /construction/math/py-dionysus/.build 4 errors make[3]: stopped in /construction/math/py-dionysus/.build *** [bindings/python/CMakeFiles/_dionysus.dir/all] Error code 2 make[2]: stopped in /construction/math/py-dionysus/.build 1 error make[2]: stopped in /construction/math/py-dionysus/.build *** [all] Error code 2 make[1]: stopped in /construction/math/py-dionysus/.build 1 error make[1]: stopped in /construction/math/py-dionysus/.build ===> Compilation failed unexpectedly. Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to the maintainer. *** Error code 1 Stop. make: stopped in /xports/math/py-dionysus FAILED 00:00:14