------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/metis-5.1.0_8.txz Installing /packages/All/tbb-2020.2.txz Installing /packages/All/indexinfo-0.3.1.txz Installing /packages/All/gmp-6.2.0.txz Installing /packages/All/mpfr-4.0.2.txz Installing /packages/All/mpc-1.1.0_2.txz UNFLAVORED devel/binutils -> use devel/binutils@native Installing /packages/All/gettext-runtime-0.20.2.txz Installing /packages/All/binutils-2.33.1_2,1.txz Installing /packages/All/gcc8-8.4.0.txz ===== Message from gcc8-8.4.0: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc8 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Installing /packages/All/openblas-0.3.9_2,1.txz Installing /packages/All/suitesparse-5.7.2_1.txz Installing /packages/All/libffi-3.2.1_3.txz Installing /packages/All/expat-2.2.8.txz Installing /packages/All/ncurses-6.1.20190525.txz Installing /packages/All/readline-8.0.4.txz Installing /packages/All/openssl-1.1.1g,1.txz Installing /packages/All/python37-3.7.7_1.txz ===== Message from python37-3.7.7_1: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py37-gdbm databases/py-gdbm@py37 py37-sqlite3 databases/py-sqlite3@py37 py37-tkinter x11-toolkits/py-tkinter@py37 Installing /packages/All/py37-setuptools-44.0.0.txz Installing /packages/All/py37-numpy-1.16.6,1.txz UNFLAVORED devel/binutils -> use devel/binutils@native SUCCEEDED 00:00:41 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> py37-pyfasta-0.5.2_4 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> py37-pyfasta-0.5.2_4 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py37-pyfasta-0.5.2_4 for building SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> py37-pyfasta-0.5.2_4 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py37-pyfasta-0.5.2_4 for building => SHA256 Checksum OK for pyfasta-0.5.2.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> py37-pyfasta-0.5.2_4 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py37-pyfasta-0.5.2_4 for building ===> Extracting for py37-pyfasta-0.5.2_4 => SHA256 Checksum OK for pyfasta-0.5.2.tar.gz. Extracted Memory Use: 0.13M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for py37-pyfasta-0.5.2_4 SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> py37-pyfasta-0.5.2_4 depends on package: py37-numpy>=1.16,1<1.19,1 - found ===> py37-pyfasta-0.5.2_4 depends on package: py37-setuptools>0 - found ===> py37-pyfasta-0.5.2_4 depends on file: /usr/local/bin/python3.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> py37-pyfasta-0.5.2_4 depends on package: py37-numpy>=1.16,1<1.19,1 - found ===> py37-pyfasta-0.5.2_4 depends on package: py37-setuptools>0 - found ===> py37-pyfasta-0.5.2_4 depends on file: /usr/local/bin/python3.7 - found ===> Configuring for py37-pyfasta-0.5.2_4 running config SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for py37-pyfasta-0.5.2_4 running build running build_py creating build creating build/lib creating build/lib/pyfasta copying pyfasta/__init__.py -> build/lib/pyfasta copying pyfasta/fasta.py -> build/lib/pyfasta copying pyfasta/records.py -> build/lib/pyfasta copying pyfasta/split_fasta.py -> build/lib/pyfasta Skipping optional fixer: buffer Skipping optional fixer: idioms Skipping optional fixer: set_literal Skipping optional fixer: ws_comma SUCCEEDED 00:00:03 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> py37-pyfasta-0.5.2_4 depends on package: py37-numpy>=1.16,1<1.19,1 - found ===> py37-pyfasta-0.5.2_4 depends on package: py37-setuptools>0 - found ===> py37-pyfasta-0.5.2_4 depends on file: /usr/local/bin/python3.7 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for py37-pyfasta-0.5.2_4 ===> py37-pyfasta-0.5.2_4 depends on package: py37-numpy>=1.16,1<1.19,1 - found ===> py37-pyfasta-0.5.2_4 depends on package: py37-setuptools>0 - found ===> py37-pyfasta-0.5.2_4 depends on file: /usr/local/bin/python3.7 - found ===> Generating temporary packing list running install running build running build_py running install_lib creating /construction/biology/pyfasta/stage/usr/local/lib/python3.7 creating /construction/biology/pyfasta/stage/usr/local/lib/python3.7/site-packages creating /construction/biology/pyfasta/stage/usr/local/lib/python3.7/site-packages/pyfasta copying build/lib/pyfasta/fasta.py -> /construction/biology/pyfasta/stage/usr/local/lib/python3.7/site-packages/pyfasta copying build/lib/pyfasta/records.py -> /construction/biology/pyfasta/stage/usr/local/lib/python3.7/site-packages/pyfasta copying build/lib/pyfasta/split_fasta.py -> /construction/biology/pyfasta/stage/usr/local/lib/python3.7/site-packages/pyfasta copying build/lib/pyfasta/__init__.py -> /construction/biology/pyfasta/stage/usr/local/lib/python3.7/site-packages/pyfasta byte-compiling /construction/biology/pyfasta/stage/usr/local/lib/python3.7/site-packages/pyfasta/fasta.py to fasta.cpython-37.pyc byte-compiling /construction/biology/pyfasta/stage/usr/local/lib/python3.7/site-packages/pyfasta/records.py to records.cpython-37.pyc byte-compiling /construction/biology/pyfasta/stage/usr/local/lib/python3.7/site-packages/pyfasta/split_fasta.py to split_fasta.cpython-37.pyc byte-compiling /construction/biology/pyfasta/stage/usr/local/lib/python3.7/site-packages/pyfasta/__init__.py to __init__.cpython-37.pyc writing byte-compilation script '/tmp/tmp1a19z58z.py' /usr/local/bin/python3.7 /tmp/tmp1a19z58z.py removing /tmp/tmp1a19z58z.py running install_egg_info running egg_info writing pyfasta.egg-info/PKG-INFO writing dependency_links to pyfasta.egg-info/dependency_links.txt writing entry points to pyfasta.egg-info/entry_points.txt writing top-level names to pyfasta.egg-info/top_level.txt reading manifest file 'pyfasta.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pyfasta.egg-info/SOURCES.txt' Copying pyfasta.egg-info to /construction/biology/pyfasta/stage/usr/local/lib/python3.7/site-packages/pyfasta-0.5.2-py3.7.egg-info running install_scripts Installing pyfasta script to /construction/biology/pyfasta/stage/usr/local/bin writing list of installed files to '/construction/biology/pyfasta/.PLIST.pymodtmp' ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:02 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for py37-pyfasta-0.5.2_4 file sizes/checksums [19]: 0% file sizes/checksums [19]: 100% packing files [19]: 0% packing files [19]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:01 TOTAL TIME 00:00:51