------------------------------------------------------------------------------- -- Phase: Environment ------------------------------------------------------------------------------- NO_DEPENDS=1 FLAVOR=py39 UNAME_r=6.5 UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=unknown UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 LANG=C HOME=/root USER=root TERM=dumb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: showconfig ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ENV ------------------------------------------------------------------------------- PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/construction/biology/py-libnuml XDG_CONFIG_HOME=/construction/biology/py-libnuml XDG_CACHE_HOME=/construction/biology/py-libnuml/.cache HOME=/construction/biology/py-libnuml TMPDIR="/tmp" PATH=/construction/biology/py-libnuml/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/biology/py-libnuml/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 CMAKE_PREFIX_PATH="/usr/local" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ARGS ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ENV ------------------------------------------------------------------------------- XDG_DATA_HOME=/construction/biology/py-libnuml XDG_CONFIG_HOME=/construction/biology/py-libnuml XDG_CACHE_HOME=/construction/biology/py-libnuml/.cache HOME=/construction/biology/py-libnuml TMPDIR="/tmp" PATH=/construction/biology/py-libnuml/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin PKG_CONFIG_LIBDIR=/construction/biology/py-libnuml/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -lnuml -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ARGS ------------------------------------------------------------------------------- DESTDIR=/construction/biology/py-libnuml/stage SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: PLIST_SUB ------------------------------------------------------------------------------- CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=dragonfly6 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=6.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PROFILE="@comment " DOCSDIR="share/doc/libnuml" EXAMPLESDIR="share/examples/libnuml" DATADIR="share/libnuml" WWWDIR="www/libnuml" ETCDIR="etc/libnuml" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: SUB_LIST ------------------------------------------------------------------------------- PYTHON_INCLUDEDIR=/usr/local/include/python3.9 PYTHON_LIBDIR=/usr/local/lib/python3.9 PYTHON_PLATFORM=dragonfly6 PYTHON_SITELIBDIR=/usr/local/lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/libnuml DOCSDIR=/usr/local/share/doc/libnuml EXAMPLESDIR=/usr/local/share/examples/libnuml WWWDIR=/usr/local/www/libnuml ETCDIR=/usr/local/etc/libnuml SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: /etc/make.conf ------------------------------------------------------------------------------- DPORTS_BUILDER=yes DISABLE_LICENSES=yes DEFAULT_VERSIONS=ssl=openssl FORCE_PACKAGE=yes DEVELOPER=yes DFLY_STING_XFAIL=yes USE_PACKAGE_DEPENDS_ONLY=yes PORTSDIR=/xports PORT_DBDIR=/options PKG_DBDIR=/var/db/pkg PKG_CACHEDIR=/var/cache/pkg PKG_COMPRESSION_FORMAT=.tgz DEVELOPER=1 WITH_CCACHE_BUILD=yes CCACHE_DIR=/ccache UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=600503 OSVERSION=9999999 OSREL=6.5 _OSRELEASE=6.5-SYNTH DISTDIR=/distfiles WRKDIRPREFIX=/construction BATCH=yes PACKAGE_BUILDING=yes PKG_CREATE_VERBOSE=yes MAKE_JOBS_NUMBER=13 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/pcre-8.45_3.pkg Installing /packages/All/swig-4.0.2.pkg Installing /packages/All/expat-2.5.0.pkg Installing /packages/All/libuv-1.44.2.pkg Installing /packages/All/indexinfo-0.3.1.pkg Installing /packages/All/gettext-runtime-0.21.1.pkg Installing /packages/All/openssl-1.1.1u,1.pkg Installing /packages/All/rhash-1.4.3.pkg Installing /packages/All/pkg-1.19.1_1.pkg Installing /packages/All/liblz4-1.9.4,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/zstd-1.5.4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libarchive-3.6.2,1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/ncurses-6.3.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===== Message from ncurses-6.3: -- To get the terminfo database please install the terminfo-db package: pkg install terminfo-db Installing /packages/All/cmake-core-3.25.1_1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libffi-3.4.4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/mpdecimal-2.5.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/readline-8.2.1.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/python39-3.9.17.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required ===== Message from python39-3.9.17: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py39-gdbm databases/py-gdbm@py39 py39-sqlite3 databases/py-sqlite3@py39 py39-tkinter x11-toolkits/py-tkinter@py39 Installing /packages/All/ccache-3.7.12_4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc create symlink for gcc (world) create symlink for g++ create symlink for g++ (world) ===== Message from ccache-3.7.12_4: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. Installing /packages/All/libxml2-2.10.4.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libsbml-5.19.0_2.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required Installing /packages/All/libnuml-1.1.6.pkg pkg: Repository Avalon cannot be opened. 'pkg update' required SUCCEEDED 00:00:14 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> py39-libnuml-1.1.6 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> py39-libnuml-1.1.6 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-libnuml-1.1.6 for building SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> py39-libnuml-1.1.6 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-libnuml-1.1.6 for building => SHA256 Checksum OK for NuML-NuML-v1.1.6_GH0.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> py39-libnuml-1.1.6 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by py39-libnuml-1.1.6 for building ===> Extracting for py39-libnuml-1.1.6 => SHA256 Checksum OK for NuML-NuML-v1.1.6_GH0.tar.gz. Extracted Memory Use: 4.95M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for py39-libnuml-1.1.6 ===> Applying ports patches for py39-libnuml-1.1.6 from /xports/biology/py-libnuml/files SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> py39-libnuml-1.1.6 depends on executable: swig - found ===> py39-libnuml-1.1.6 depends on file: /usr/local/bin/cmake - found ===> py39-libnuml-1.1.6 depends on file: /usr/local/bin/python3.9 - found ===> py39-libnuml-1.1.6 depends on file: /usr/local/bin/ccache - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- ===> py39-libnuml-1.1.6 depends on shared library: libnuml.so - found (/usr/local/lib/libnuml.so) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> py39-libnuml-1.1.6 depends on executable: swig - found ===> py39-libnuml-1.1.6 depends on file: /usr/local/bin/cmake - found ===> py39-libnuml-1.1.6 depends on file: /usr/local/bin/python3.9 - found ===> py39-libnuml-1.1.6 depends on file: /usr/local/bin/ccache - found ===> py39-libnuml-1.1.6 depends on shared library: libnuml.so - found (/usr/local/lib/libnuml.so) ===> Configuring for py39-libnuml-1.1.6 ===> Performing out-of-source build /bin/mkdir -p /construction/biology/py-libnuml/.build CMake Warning (dev) in CMakeLists.txt: No project() command is present. The top-level CMakeLists.txt file must contain a literal, direct call to the project() command. Add a line of code such as project(ProjectName) near the top of the file, but after cmake_minimum_required(). CMake is pretending there is a "project(Project)" command on the first line. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 8.3.0 -- The CXX compiler identification is GNU 8.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/libexec/ccache/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/libexec/ccache/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found SWIG: /usr/local/bin/swig (found version "4.0.2") -- Found PythonInterp: /usr/local/bin/python3.9 (found version "3.9.17") -- Found PythonLibs: /usr/local/lib/libpython3.9.so (found version "3.9.17") CMake Warning (dev) in CMakeLists.txt: No cmake_minimum_required command is present. A line of code such as cmake_minimum_required(VERSION 3.25) should be added at the top of the file. The version specified may be lower if you wish to support older CMake versions for this project. For more information run "cmake --help-policy CMP0000". This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: BOOST_PYTHON_SUFFIX CMAKE_CXX_FLAGS_DEBUG CMAKE_C_FLAGS_DEBUG CMAKE_C_FLAGS_RELEASE CMAKE_EXE_LINKER_FLAGS CMAKE_MODULE_LINKER_FLAGS FETCHCONTENT_FULLY_DISCONNECTED THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /construction/biology/py-libnuml/.build SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for py39-libnuml-1.1.6 /usr/local/bin/cmake -S/construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python -B/construction/biology/py-libnuml/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/biology/py-libnuml/.build/CMakeFiles /construction/biology/py-libnuml/.build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all --- CMakeFiles/binding_python_swig.dir/all --- /usr/bin/make -f CMakeFiles/binding_python_swig.dir/build.make CMakeFiles/binding_python_swig.dir/depend --- CMakeFiles/binding_python_swig.dir/depend --- cd /construction/biology/py-libnuml/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python /construction/biology/py-libnuml/.build /construction/biology/py-libnuml/.build /construction/biology/py-libnuml/.build/CMakeFiles/binding_python_swig.dir/DependInfo.cmake /usr/bin/make -f CMakeFiles/binding_python_swig.dir/build.make CMakeFiles/binding_python_swig.dir/build --- libnuml_wrap.cpp --- [ 20%] Swig Python source /usr/local/bin/swig -I/construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/../swig/ -I/usr/local/include -I/construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/ -I/construction/biology/py-libnuml/.build/ -I/construction/biology/py-libnuml/.build/src -I/construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/src -I/construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/include -I/construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/numl -I/construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python -I/ -c++ -python -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -o /construction/biology/py-libnuml/.build/libnuml_wrap.cpp /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/libnuml.i /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. /usr/local/bin/cmake -DCUR_BIN_DIRECTORY="/construction/biology/py-libnuml/.build" -DVERSION="" -P /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/add_version.cmake Python: patch loader Python: Add Version to generated file [ 20%] Built target binding_python_swig --- CMakeFiles/binding_python_lib.dir/all --- /usr/bin/make -f CMakeFiles/binding_python_lib.dir/build.make CMakeFiles/binding_python_lib.dir/depend --- CMakeFiles/binding_python_lib.dir/depend --- cd /construction/biology/py-libnuml/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python /construction/biology/py-libnuml/.build /construction/biology/py-libnuml/.build /construction/biology/py-libnuml/.build/CMakeFiles/binding_python_lib.dir/DependInfo.cmake /usr/bin/make -f CMakeFiles/binding_python_lib.dir/build.make CMakeFiles/binding_python_lib.dir/build --- CMakeFiles/binding_python_lib.dir/libnuml_wrap.o --- [ 40%] Building CXX object CMakeFiles/binding_python_lib.dir/libnuml_wrap.o /usr/local/libexec/ccache/c++ -DLIBNUML_STATIC -Dbinding_python_lib_EXPORTS -I/construction/biology/py-libnuml/.build/src/numl -I/construction/biology/py-libnuml/.build/src -I/construction/biology/py-libnuml/.build -I/construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python -I/construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/../swig -I/construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/src -I/construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python/src/numl -I/usr/local/include/python3.9 -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -DNDEBUG -fPIC -MD -MT CMakeFiles/binding_python_lib.dir/libnuml_wrap.o -MF CMakeFiles/binding_python_lib.dir/libnuml_wrap.o.d -o CMakeFiles/binding_python_lib.dir/libnuml_wrap.o -c /construction/biology/py-libnuml/.build/libnuml_wrap.cpp --- _libnuml.so --- [ 60%] Linking CXX shared library _libnuml.so /usr/local/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/local/libexec/ccache/c++ -fPIC -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -DNDEBUG -lnuml -L/usr/local/lib -shared -Wl,-soname,_libnuml.so -o _libnuml.so CMakeFiles/binding_python_lib.dir/libnuml_wrap.o -Wl,-z,origin,-rpath,/usr/local/lib /usr/local/lib/libpython3.9.so [100%] Built target binding_python_lib /usr/local/bin/cmake -E cmake_progress_start /construction/biology/py-libnuml/.build/CMakeFiles 0 SUCCEEDED 00:00:13 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> py39-libnuml-1.1.6 depends on file: /usr/local/bin/python3.9 - found SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for py39-libnuml-1.1.6 ===> py39-libnuml-1.1.6 depends on file: /usr/local/bin/python3.9 - found ===> Generating temporary packing list /usr/local/bin/cmake -S/construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python -B/construction/biology/py-libnuml/.build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /construction/biology/py-libnuml/.build/CMakeFiles /construction/biology/py-libnuml/.build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f CMakeFiles/binding_python_swig.dir/build.make CMakeFiles/binding_python_swig.dir/depend cd /construction/biology/py-libnuml/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python /construction/biology/py-libnuml/.build /construction/biology/py-libnuml/.build /construction/biology/py-libnuml/.build/CMakeFiles/binding_python_swig.dir/DependInfo.cmake /usr/bin/make -f CMakeFiles/binding_python_swig.dir/build.make CMakeFiles/binding_python_swig.dir/build [ 20%] Built target binding_python_swig /usr/bin/make -f CMakeFiles/binding_python_lib.dir/build.make CMakeFiles/binding_python_lib.dir/depend cd /construction/biology/py-libnuml/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python /construction/biology/py-libnuml/NuML-1.1.6/libnuml/src/bindings/python /construction/biology/py-libnuml/.build /construction/biology/py-libnuml/.build /construction/biology/py-libnuml/.build/CMakeFiles/binding_python_lib.dir/DependInfo.cmake /usr/bin/make -f CMakeFiles/binding_python_lib.dir/build.make CMakeFiles/binding_python_lib.dir/build [100%] Built target binding_python_lib /usr/local/bin/cmake -E cmake_progress_start /construction/biology/py-libnuml/.build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall /usr/bin/make -f CMakeFiles/binding_python_lib.dir/build.make CMakeFiles/binding_python_lib.dir/preinstall Linking CXX shared library CMakeFiles/CMakeRelink.dir/_libnuml.so /usr/local/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/relink.txt --verbose=1 /usr/local/libexec/ccache/c++ -fPIC -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -pipe -O2 -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -DNDEBUG -lnuml -L/usr/local/lib -shared -Wl,-soname,_libnuml.so -o CMakeFiles/CMakeRelink.dir/_libnuml.so CMakeFiles/binding_python_lib.dir/libnuml_wrap.o -Wl,-z,origin,-rpath,/usr/local/lib /usr/local/lib/libpython3.9.so Installing the project stripped... /usr/local/bin/cmake -DCMAKE_INSTALL_DO_STRIP=1 -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /construction/biology/py-libnuml/stage/usr/local/lib/python3.9/site-packages/libnuml/_libnuml.so -- Installing: /construction/biology/py-libnuml/stage/usr/local/lib/python3.9/site-packages/libnuml.pth -- Installing: /construction/biology/py-libnuml/stage/usr/local/lib/python3.9/site-packages/libnuml/libnuml.py ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Error: /usr/local/lib/python3.9/site-packages/libnuml/_libnuml.so is linked to /usr/local/lib/libxml2.so.2 from textproc/libxml2 but it is not declared as a dependency Warning: you need USE_GNOME+=libxml2 Error: /usr/local/lib/python3.9/site-packages/libnuml/_libnuml.so is linked to /usr/local/lib/libintl.so.8 from devel/gettext-runtime but it is not declared as a dependency Warning: you need USES+=gettext-runtime Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: check-plist ------------------------------------------------------------------------------- ====> Checking for pkg-plist issues (check-plist) ===> Parsing plist ===> Checking for items in STAGEDIR missing from pkg-plist ===> Checking for items in pkg-plist which are not in STAGEDIR ===> No pkg-plist issues found (check-plist) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for py39-libnuml-1.1.6 file sizes/checksums [3]: 0% file sizes/checksums [3]: 100% Service unavailablepacking files [3]: 0% packing files [3]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:00 TOTAL TIME 00:00:32