------------------------------------------------------------------------------- -- Phase: Environment ------------------------------------------------------------------------------- NO_DEPENDS=1 UNAME_r=6.1 UNAME_m=x86_64 UNAME_p=x86_64 UNAME_v=unknown UNAME_s=DragonFly PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SSL_NO_VERIFY_PEER=1 LANG=C HOME=/root USER=root TERM=dumb SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: showconfig ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ENV ------------------------------------------------------------------------------- ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/construction/biology/p5-Bio-ASN1-EntrezGene XDG_CONFIG_HOME=/construction/biology/p5-Bio-ASN1-EntrezGene HOME=/construction/biology/p5-Bio-ASN1-EntrezGene TMPDIR="/tmp" PATH=/construction/biology/p5-Bio-ASN1-EntrezGene/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCVER=gcc80 PERL_EXTUTILS_AUTOINSTALL="--skipdeps" PERL_MM_USE_DEFAULT="YES" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: CONFIGURE_ARGS ------------------------------------------------------------------------------- INSTALLDIRS="site" CC="cc" CCFLAGS="-pipe -O2 -fno-strict-aliasing " LD="cc" PREFIX="/usr/local" INSTALLPRIVLIB="/usr/local/lib" INSTALLARCHLIB="/usr/local/lib" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ENV ------------------------------------------------------------------------------- PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/construction/biology/p5-Bio-ASN1-EntrezGene XDG_CONFIG_HOME=/construction/biology/p5-Bio-ASN1-EntrezGene HOME=/construction/biology/p5-Bio-ASN1-EntrezGene TMPDIR="/tmp" PATH=/construction/biology/p5-Bio-ASN1-EntrezGene/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES CCVER=gcc80 PREFIX=/usr/local LOCALBASE=/usr/local NOPROFILE=1 CC="cc" CFLAGS="-pipe -O2 -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS=" -pipe -O2 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: MAKE_ARGS ------------------------------------------------------------------------------- DESTDIR=/construction/biology/p5-Bio-ASN1-EntrezGene/stage SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: PLIST_SUB ------------------------------------------------------------------------------- OSREL=6.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.32.1 PERL_VER=5.32 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.32 PROFILE="@comment " DOCSDIR="share/doc/Bio-ASN1-EntrezGene" EXAMPLESDIR="share/examples/Bio-ASN1-EntrezGene" DATADIR="share/Bio-ASN1-EntrezGene" WWWDIR="www/Bio-ASN1-EntrezGene" ETCDIR="etc/Bio-ASN1-EntrezGene" SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: SUB_LIST ------------------------------------------------------------------------------- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/Bio-ASN1-EntrezGene DOCSDIR=/usr/local/share/doc/Bio-ASN1-EntrezGene EXAMPLESDIR=/usr/local/share/examples/Bio-ASN1-EntrezGene WWWDIR=/usr/local/www/Bio-ASN1-EntrezGene ETCDIR=/usr/local/etc/Bio-ASN1-EntrezGene SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: /etc/make.conf ------------------------------------------------------------------------------- DPORTS_BUILDER=yes DISABLE_LICENSES=yes DEFAULT_VERSIONS=ssl=openssl FORCE_PACKAGE=yes DEVELOPER=yes USE_PACKAGE_DEPENDS_ONLY=yes PORTSDIR=/xports PORT_DBDIR=/options PKG_DBDIR=/var/db/pkg PKG_CACHEDIR=/var/cache/pkg PKG_SUFX=.txz DEVELOPER=1 UID=0 ARCH=x86_64 OPSYS=DragonFly DFLYVERSION=600105 OSVERSION=9999999 OSREL=6.1 _OSRELEASE=6.1-SYNTH DISTDIR=/distfiles WRKDIRPREFIX=/construction BATCH=yes PACKAGE_BUILDING=yes PKG_CREATE_VERBOSE=yes MAKE_JOBS_NUMBER=12 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: setup ------------------------------------------------------------------------------- Installing /packages/All/perl5-5.32.1_1.txz Installing /packages/All/p5-IO-String-1.08_1.txz Installing /packages/All/p5-Data-Stag-0.14_2.txz Installing /packages/All/p5-Error-0.17029.txz Installing /packages/All/p5-Heap-0.80_1.txz Installing /packages/All/p5-Set-Object-1.41.txz Installing /packages/All/p5-Graph-0.9721,1.txz Installing /packages/All/p5-Clone-0.45.txz Installing /packages/All/p5-Encode-Locale-1.05.txz Installing /packages/All/p5-TimeDate-2.33,1.txz Installing /packages/All/p5-HTTP-Date-6.05.txz Installing /packages/All/p5-IO-HTML-1.001_1.txz Installing /packages/All/p5-LWP-MediaTypes-6.04.txz Installing /packages/All/p5-URI-5.09.txz Installing /packages/All/p5-HTTP-Message-6.32.txz Installing /packages/All/p5-IO-Stringy-2.113.txz Installing /packages/All/p5-IO-Tty-1.16.txz Installing /packages/All/p5-IPC-Run-20200505.0.txz Installing /packages/All/p5-Exporter-Tiny-1.002002.txz Installing /packages/All/p5-List-MoreUtils-XS-0.430.txz Installing /packages/All/p5-List-MoreUtils-0.430.txz Installing /packages/All/p5-Module-Build-0.4231.txz Installing /packages/All/p5-Set-Scalar-1.29.txz Installing /packages/All/p5-Class-Data-Inheritable-0.08_1.txz Installing /packages/All/p5-Devel-StackTrace-2.04.txz Installing /packages/All/p5-Exception-Class-1.45.txz Installing /packages/All/p5-Test-Deep-1.130.txz Installing /packages/All/p5-Algorithm-Diff-1.1903.txz Installing /packages/All/p5-Text-Diff-1.45.txz Installing /packages/All/p5-Test-Differences-0.650,1.txz Installing /packages/All/p5-Sub-Uplevel-0.2800.txz Installing /packages/All/p5-Test-Exception-0.43.txz Installing /packages/All/p5-Test-Warn-0.36.txz Installing /packages/All/p5-Test-Most-0.37.txz Installing /packages/All/p5-Test-RequiresInternet-0.05.txz Installing /packages/All/expat-2.4.1.txz Installing /packages/All/p5-XML-Parser-2.44.txz Installing /packages/All/p5-libxml-0.08_1.txz Installing /packages/All/p5-Digest-HMAC-1.04.txz Installing /packages/All/p5-Authen-NTLM-1.09_1.txz Installing /packages/All/p5-File-Listing-6.14.txz Installing /packages/All/p5-HTML-Tagset-3.20_1.txz Installing /packages/All/p5-HTML-Parser-3.76.txz Installing /packages/All/p5-HTTP-Cookies-6.10.txz Installing /packages/All/p5-HTTP-Negotiate-6.01_1.txz Installing /packages/All/openssl-1.1.1l,1.txz Installing /packages/All/p5-Net-SSLeay-1.90.txz Installing /packages/All/p5-Mozilla-CA-20200520.txz Installing /packages/All/p5-Socket6-0.29.txz Installing /packages/All/p5-IO-Socket-INET6-2.72_1.txz Installing /packages/All/p5-IO-Socket-SSL-2.071.txz Installing /packages/All/p5-Net-HTTP-6.21.txz Installing /packages/All/p5-Try-Tiny-0.30.txz Installing /packages/All/p5-WWW-RobotRules-6.02_1.txz Installing /packages/All/p5-libwww-6.55.txz Installing /packages/All/p5-XML-RegExp-0.04_1.txz Installing /packages/All/p5-XML-DOM-1.44_1.txz Installing /packages/All/p5-XML-XPathEngine-0.14_1.txz Installing /packages/All/p5-XML-DOM-XPath-0.14_1.txz Installing /packages/All/libxml2-2.9.12.txz Installing /packages/All/p5-XML-NamespaceSupport-1.12.txz Installing /packages/All/p5-XML-SAX-Base-1.09.txz Installing /packages/All/p5-XML-SAX-1.02.txz could not find ParserDetails.ini in /usr/local/lib/perl5/site_perl/XML/SAX Installing /packages/All/p5-XML-LibXML-2.0207,1.txz Installing /packages/All/p5-XML-Filter-BufferText-1.01_1.txz Installing /packages/All/p5-XML-SAX-Writer-0.57.txz Installing /packages/All/p5-HTML-Tree-5.07.txz Installing /packages/All/libiconv-1.16.txz Installing /packages/All/p5-Text-Iconv-1.7_3.txz Installing /packages/All/p5-Tie-IxHash-1.23_1.txz Installing /packages/All/p5-XML-XPath-1.44.txz Installing /packages/All/p5-XML-Twig-3.52.txz Installing /packages/All/p5-XML-Writer-0.900.txz Installing /packages/All/p5-YAML-1.30.txz Installing /packages/All/p5-BioPerl-1.007007_1.txz Installing /packages/All/p5-Bio-Variation-1.7.5.txz Installing /packages/All/p5-Bio-Cluster-1.7.3_1.txz SUCCEEDED 00:00:21 ------------------------------------------------------------------------------- -- Phase: check-sanity ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: pkg-depends ------------------------------------------------------------------------------- ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on file: /usr/local/sbin/pkg - found SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: fetch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: fetch ------------------------------------------------------------------------------- ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by p5-Bio-ASN1-EntrezGene-1.73_2,1 for building SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: checksum ------------------------------------------------------------------------------- ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by p5-Bio-ASN1-EntrezGene-1.73_2,1 for building => SHA256 Checksum OK for Bio-ASN1-EntrezGene-1.73.tar.gz. SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: extract ------------------------------------------------------------------------------- ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on file: /usr/local/sbin/pkg - found ===> Fetching all distfiles required by p5-Bio-ASN1-EntrezGene-1.73_2,1 for building ===> Extracting for p5-Bio-ASN1-EntrezGene-1.73_2,1 => SHA256 Checksum OK for Bio-ASN1-EntrezGene-1.73.tar.gz. Extracted Memory Use: 1.27M SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: patch ------------------------------------------------------------------------------- ===> Patching for p5-Bio-ASN1-EntrezGene-1.73_2,1 SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: build-depends ------------------------------------------------------------------------------- ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: p5-Bio-Cluster>=0 - found ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: p5-BioPerl>=0 - found ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: perl5>=5.32.r0<5.33 - found ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: perl5>=5.32.r0<5.33 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: lib-depends ------------------------------------------------------------------------------- SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: configure ------------------------------------------------------------------------------- ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: p5-Bio-Cluster>=0 - found ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: p5-BioPerl>=0 - found ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: perl5>=5.32.r0<5.33 - found ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: perl5>=5.32.r0<5.33 - found ===> Configuring for p5-Bio-ASN1-EntrezGene-1.73_2,1 Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::ASN1::EntrezGene Writing MYMETA.yml and MYMETA.json SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: build ------------------------------------------------------------------------------- ===> Building for p5-Bio-ASN1-EntrezGene-1.73_2,1 --- blib/lib/Bio/ASN1/.exists --- --- blib/arch/.exists --- --- blib/lib/auto/Bio/ASN1/EntrezGene/.exists --- --- blib/arch/auto/Bio/ASN1/EntrezGene/.exists --- --- blib/bin/.exists --- --- blib/script/.exists --- --- blib/man1/.exists --- --- blib/man3/.exists --- --- config --- --- subdirs --- --- dynamic --- --- pm_to_blib --- --- blibdirs --- --- config --- --- dynamic --- --- linkext --- --- pm_to_blib --- cp lib/Bio/ASN1/Sequence/Indexer.pm blib/lib/Bio/ASN1/Sequence/Indexer.pm cp lib/Bio/ASN1/Sequence.pm blib/lib/Bio/ASN1/Sequence.pm cp lib/Bio/ASN1/EntrezGene.pm blib/lib/Bio/ASN1/EntrezGene.pm cp lib/Bio/SeqIO/entrezgene.pm blib/lib/Bio/SeqIO/entrezgene.pm cp lib/Bio/ASN1/EntrezGene/Indexer.pm blib/lib/Bio/ASN1/EntrezGene/Indexer.pm --- pure_all --- --- manifypods --- Manifying 5 pod documents --- all --- SUCCEEDED 00:00:01 ------------------------------------------------------------------------------- -- Phase: run-depends ------------------------------------------------------------------------------- ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: p5-Bio-Cluster>=0 - found ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: p5-BioPerl>=0 - found ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: perl5>=5.32.r0<5.33 - found SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: stage ------------------------------------------------------------------------------- ===> Staging for p5-Bio-ASN1-EntrezGene-1.73_2,1 ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: p5-Bio-Cluster>=0 - found ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: p5-BioPerl>=0 - found ===> p5-Bio-ASN1-EntrezGene-1.73_2,1 depends on package: perl5>=5.32.r0<5.33 - found ===> Generating temporary packing list Manifying 5 pod documents Installing /construction/biology/p5-Bio-ASN1-EntrezGene/stage/usr/local/lib/perl5/site_perl/Bio/ASN1/Sequence.pm Installing /construction/biology/p5-Bio-ASN1-EntrezGene/stage/usr/local/lib/perl5/site_perl/Bio/ASN1/EntrezGene.pm Installing /construction/biology/p5-Bio-ASN1-EntrezGene/stage/usr/local/lib/perl5/site_perl/Bio/ASN1/Sequence/Indexer.pm Installing /construction/biology/p5-Bio-ASN1-EntrezGene/stage/usr/local/lib/perl5/site_perl/Bio/ASN1/EntrezGene/Indexer.pm Installing /construction/biology/p5-Bio-ASN1-EntrezGene/stage/usr/local/lib/perl5/site_perl/Bio/SeqIO/entrezgene.pm Installing /construction/biology/p5-Bio-ASN1-EntrezGene/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::ASN1::EntrezGene.3 Installing /construction/biology/p5-Bio-ASN1-EntrezGene/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::ASN1::EntrezGene::Indexer.3 Installing /construction/biology/p5-Bio-ASN1-EntrezGene/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::ASN1::Sequence.3 Installing /construction/biology/p5-Bio-ASN1-EntrezGene/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::ASN1::Sequence::Indexer.3 Installing /construction/biology/p5-Bio-ASN1-EntrezGene/stage/usr/local/lib/perl5/site_perl/man/man3/Bio::SeqIO::entrezgene.3 ====> Compressing man pages (compress-man) ====> Running Q/A tests (stage-qa) Notice: You have some Perl modules as dependencies but you do not have devel/p5-Module-CoreList installed, the perlcore QA check gets better results when using it, especially with older Perl versions. Warning: You have disabled the licenses framework with DISABLE_LICENSES, unable to run checks SUCCEEDED 00:00:02 ------------------------------------------------------------------------------- -- Phase: check-plist ------------------------------------------------------------------------------- ====> Checking for pkg-plist issues (check-plist) ===> Parsing plist ===> Checking for items in STAGEDIR missing from pkg-plist ===> Checking for items in pkg-plist which are not in STAGEDIR ===> No pkg-plist issues found (check-plist) SUCCEEDED 00:00:00 ------------------------------------------------------------------------------- -- Phase: package ------------------------------------------------------------------------------- ===> Building package for p5-Bio-ASN1-EntrezGene-1.73_2,1 file sizes/checksums [11]: 0% file sizes/checksums [11]: 100% packing files [11]: 0% packing files [11]: 100% packing directories [0]: 0% packing directories [0]: 100% SUCCEEDED 00:00:00 TOTAL TIME 00:00:27